MGE detailed information
MGE type: Prophage MGE length: 25133 bp
Accession: NZ_CP087688 Location: 2300762..2325894 Organism: Xylella taiwanensis strain PLS413 Replicon: chromosome
Accession: NZ_CP087688 Location: 2300762..2325894 Organism: Xylella taiwanensis strain PLS413 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH64_RS09460 (LPH64_09460) | 2296931..2297089 | + | 159 | WP_160165146.1 | hypothetical protein | - |
| LPH64_RS09465 (LPH64_09465) | 2297291..2297536 | + | 246 | WP_230428174.1 | hypothetical protein | - |
| LPH64_RS09470 (LPH64_09470) | 2297873..2298976 | + | 1104 | WP_038270679.1 | sulfate ABC transporter substrate-binding protein | - |
| LPH64_RS09475 (LPH64_09475) | 2298980..2299840 | + | 861 | WP_038270680.1 | sulfate ABC transporter permease subunit CysT | - |
| LPH64_RS09480 (LPH64_09480) | 2299852..2300796 | + | 945 | WP_051482278.1 | sulfate ABC transporter permease subunit CysW | - |
| LPH64_RS09485 (LPH64_09485) | 2300810..2301856 | + | 1047 | WP_038270717.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| LPH64_RS09490 (LPH64_09490) | 2302543..2303139 | - | 597 | WP_162814073.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| LPH64_RS09495 (LPH64_09495) | 2303351..2303407 | - | 57 | Protein_1870 | phage tail protein | - |
| LPH64_RS09500 (LPH64_09500) | 2303404..2303658 | - | 255 | WP_230428278.1 | phage tail protein | - |
| LPH64_RS09505 (LPH64_09505) | 2303731..2304213 | - | 483 | Protein_1872 | phage tail protein I | - |
| LPH64_RS09510 (LPH64_09510) | 2304206..2305099 | - | 894 | WP_038270682.1 | baseplate J/gp47 family protein | - |
| LPH64_RS09515 (LPH64_09515) | 2305099..2305428 | - | 330 | WP_230428175.1 | GPW/gp25 family protein | - |
| LPH64_RS09520 (LPH64_09520) | 2305529..2305807 | + | 279 | WP_038270683.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LPH64_RS09525 (LPH64_09525) | 2305811..2306110 | + | 300 | WP_081755408.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LPH64_RS09530 (LPH64_09530) | 2306120..2306416 | - | 297 | WP_230428176.1 | phage baseplate assembly protein V | - |
| LPH64_RS09535 (LPH64_09535) | 2306370..2306579 | - | 210 | WP_230428177.1 | phage baseplate assembly protein V | - |
| LPH64_RS09540 (LPH64_09540) | 2306579..2307232 | - | 654 | WP_230428178.1 | hypothetical protein | - |
| LPH64_RS09545 (LPH64_09545) | 2307208..2307624 | - | 417 | WP_230428499.1 | hypothetical protein | - |
| LPH64_RS09550 (LPH64_09550) | 2307747..2308040 | - | 294 | WP_038270685.1 | hypothetical protein | - |
| LPH64_RS09555 (LPH64_09555) | 2308021..2308251 | - | 231 | WP_230428500.1 | hypothetical protein | - |
| LPH64_RS09560 (LPH64_09560) | 2308378..2308626 | - | 249 | WP_038270686.1 | hypothetical protein | - |
| LPH64_RS09565 (LPH64_09565) | 2308665..2310049 | - | 1385 | Protein_1884 | phage major capsid protein | - |
| LPH64_RS09570 (LPH64_09570) | 2310148..2310597 | - | 450 | WP_230428180.1 | hypothetical protein | - |
| LPH64_RS09575 (LPH64_09575) | 2310616..2311257 | - | 642 | WP_038270687.1 | phage terminase large subunit family protein | - |
| LPH64_RS09580 (LPH64_09580) | 2311241..2311447 | - | 207 | WP_038270689.1 | phage terminase large subunit family protein | - |
| LPH64_RS09585 (LPH64_09585) | 2311885..2312190 | + | 306 | WP_051482274.1 | hypothetical protein | - |
| LPH64_RS09590 (LPH64_09590) | 2312268..2312459 | + | 192 | WP_051482275.1 | hypothetical protein | - |
| LPH64_RS09595 (LPH64_09595) | 2312570..2312920 | - | 351 | WP_230428181.1 | hypothetical protein | - |
| LPH64_RS09600 (LPH64_09600) | 2313522..2313854 | + | 333 | WP_038270693.1 | hypothetical protein | - |
| LPH64_RS09605 (LPH64_09605) | 2313858..2314685 | + | 828 | WP_038270695.1 | DUF2303 family protein | - |
| LPH64_RS09610 (LPH64_09610) | 2314842..2315243 | + | 402 | WP_160165148.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LPH64_RS09615 (LPH64_09615) | 2315247..2315591 | + | 345 | WP_038270697.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LPH64_RS09620 (LPH64_09620) | 2315601..2316173 | + | 573 | WP_051482276.1 | hypothetical protein | - |
| LPH64_RS09625 (LPH64_09625) | 2316827..2317753 | - | 927 | WP_038270698.1 | lauroyl acyltransferase | - |
| LPH64_RS09630 (LPH64_09630) | 2318151..2320016 | + | 1866 | WP_038270699.1 | RNA polymerase sigma factor RpoD | - |
| LPH64_RS09635 (LPH64_09635) | 2320626..2320817 | + | 192 | WP_038270700.1 | hypothetical protein | - |
| LPH64_RS09640 (LPH64_09640) | 2322816..2325065 | - | 2250 | WP_038272689.1 | DNA topoisomerase IV subunit A | - |
| LPH64_RS09645 (LPH64_09645) | 2325463..2325894 | + | 432 | WP_038272687.1 | MarR family transcriptional regulator | - |
| LPH64_RS09650 (LPH64_09650) | 2325891..2327381 | + | 1491 | WP_038272685.1 | efflux transporter outer membrane subunit | - |
| LPH64_RS09655 (LPH64_09655) | 2327392..2328570 | + | 1179 | WP_038272696.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LPH64_RS09660 (LPH64_09660) | 2328580..2330145 | + | 1566 | WP_051482376.1 | DHA2 family efflux MFS transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|