MGE detailed information
MGE type: Prophage MGE length: 25133 bp
Accession: NZ_CP087685 Location: 2270155..2295287 Organism: Xylella taiwanensis strain PLS4A Replicon: chromosome
Accession: NZ_CP087685 Location: 2270155..2295287 Organism: Xylella taiwanensis strain PLS4A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH40_RS09285 (LPH40_09285) | 2266324..2266482 | + | 159 | WP_160165146.1 | hypothetical protein | - |
| LPH40_RS09290 (LPH40_09290) | 2266684..2266929 | + | 246 | WP_230428174.1 | hypothetical protein | - |
| LPH40_RS09295 (LPH40_09295) | 2267266..2268369 | + | 1104 | WP_038270679.1 | sulfate ABC transporter substrate-binding protein | - |
| LPH40_RS09300 (LPH40_09300) | 2268373..2269233 | + | 861 | WP_038270680.1 | sulfate ABC transporter permease subunit CysT | - |
| LPH40_RS09305 (LPH40_09305) | 2269245..2270189 | + | 945 | WP_051482278.1 | sulfate ABC transporter permease subunit CysW | - |
| LPH40_RS09310 (LPH40_09310) | 2270203..2271249 | + | 1047 | WP_038270717.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| LPH40_RS09315 (LPH40_09315) | 2271936..2272532 | - | 597 | WP_162814073.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| LPH40_RS09320 (LPH40_09320) | 2272720..2272800 | - | 81 | Protein_1837 | tail protein X | - |
| LPH40_RS09325 (LPH40_09325) | 2272797..2273051 | - | 255 | WP_230428278.1 | phage tail protein | - |
| LPH40_RS09330 (LPH40_09330) | 2273124..2273606 | - | 483 | Protein_1839 | phage tail protein I | - |
| LPH40_RS09335 (LPH40_09335) | 2273599..2274492 | - | 894 | WP_038270682.1 | baseplate J/gp47 family protein | - |
| LPH40_RS09340 (LPH40_09340) | 2274492..2274821 | - | 330 | WP_230428175.1 | GPW/gp25 family protein | - |
| LPH40_RS09345 (LPH40_09345) | 2274922..2275200 | + | 279 | WP_038270683.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LPH40_RS09350 (LPH40_09350) | 2275204..2275503 | + | 300 | WP_081755408.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LPH40_RS09355 (LPH40_09355) | 2275513..2275809 | - | 297 | WP_230428176.1 | phage baseplate assembly protein V | - |
| LPH40_RS09360 (LPH40_09360) | 2275763..2275972 | - | 210 | WP_230428177.1 | phage baseplate assembly protein V | - |
| LPH40_RS09365 (LPH40_09365) | 2275972..2276625 | - | 654 | WP_230428178.1 | hypothetical protein | - |
| LPH40_RS09370 (LPH40_09370) | 2276601..2277050 | - | 450 | WP_230428179.1 | hypothetical protein | - |
| LPH40_RS09375 (LPH40_09375) | 2277140..2277433 | - | 294 | WP_038270685.1 | hypothetical protein | - |
| LPH40_RS09380 (LPH40_09380) | 2277771..2278019 | - | 249 | WP_038270686.1 | hypothetical protein | - |
| LPH40_RS09385 (LPH40_09385) | 2278058..2279442 | - | 1385 | Protein_1850 | phage major capsid protein | - |
| LPH40_RS09390 (LPH40_09390) | 2279541..2279990 | - | 450 | WP_230428180.1 | hypothetical protein | - |
| LPH40_RS09395 (LPH40_09395) | 2280009..2280650 | - | 642 | WP_038270687.1 | phage terminase large subunit family protein | - |
| LPH40_RS09400 (LPH40_09400) | 2280634..2280840 | - | 207 | WP_038270689.1 | phage terminase large subunit family protein | - |
| LPH40_RS09405 (LPH40_09405) | 2281278..2281583 | + | 306 | WP_051482274.1 | hypothetical protein | - |
| LPH40_RS09410 (LPH40_09410) | 2281661..2281852 | + | 192 | WP_051482275.1 | hypothetical protein | - |
| LPH40_RS09415 (LPH40_09415) | 2281963..2282301 | - | 339 | WP_230430680.1 | hypothetical protein | - |
| LPH40_RS09420 (LPH40_09420) | 2282915..2283247 | + | 333 | WP_038270693.1 | hypothetical protein | - |
| LPH40_RS09425 (LPH40_09425) | 2283251..2284078 | + | 828 | WP_038270695.1 | DUF2303 family protein | - |
| LPH40_RS09430 (LPH40_09430) | 2284235..2284636 | + | 402 | WP_160165148.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LPH40_RS09435 (LPH40_09435) | 2284640..2284984 | + | 345 | WP_038270697.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LPH40_RS09440 (LPH40_09440) | 2284994..2285566 | + | 573 | WP_051482276.1 | hypothetical protein | - |
| LPH40_RS09445 (LPH40_09445) | 2286220..2287146 | - | 927 | WP_038270698.1 | lauroyl acyltransferase | - |
| LPH40_RS09450 (LPH40_09450) | 2287544..2289409 | + | 1866 | WP_038270699.1 | RNA polymerase sigma factor RpoD | - |
| LPH40_RS09455 (LPH40_09455) | 2290019..2290210 | + | 192 | WP_038270700.1 | hypothetical protein | - |
| LPH40_RS09460 (LPH40_09460) | 2292209..2294458 | - | 2250 | WP_038272689.1 | DNA topoisomerase IV subunit A | - |
| LPH40_RS09465 (LPH40_09465) | 2294856..2295287 | + | 432 | WP_038272687.1 | MarR family transcriptional regulator | - |
| LPH40_RS09470 (LPH40_09470) | 2295284..2296774 | + | 1491 | WP_038272685.1 | efflux transporter outer membrane subunit | - |
| LPH40_RS09475 (LPH40_09475) | 2296785..2297963 | + | 1179 | WP_038272696.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LPH40_RS09480 (LPH40_09480) | 2297973..2299538 | + | 1566 | WP_051482376.1 | DHA2 family efflux MFS transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|