MGE detailed information
MGE type: Prophage MGE length: 18014 bp
Accession: NZ_CP087683 Location: 1252335..1270348 Organism: Xylella taiwanensis strain PLS1135 Replicon: chromosome
Accession: NZ_CP087683 Location: 1252335..1270348 Organism: Xylella taiwanensis strain PLS1135 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH44_RS05330 (LPH44_05330) | 1247605..1248801 | - | 1197 | WP_038272824.1 | GTP cyclohydrolase II RibA | - |
| LPH44_RS05335 (LPH44_05335) | 1248893..1249057 | - | 165 | WP_160165225.1 | hypothetical protein | - |
| LPH44_RS05340 (LPH44_05340) | 1251474..1252025 | + | 552 | WP_038272837.1 | TlpA disulfide reductase family protein | - |
| LPH44_RS05345 (LPH44_05345) | 1252335..1253543 | + | 1209 | WP_038272829.1 | hypothetical protein | - |
| LPH44_RS05350 (LPH44_05350) | 1254045..1254365 | - | 321 | WP_038272832.1 | hypothetical protein | - |
| LPH44_RS05355 (LPH44_05355) | 1254437..1255153 | - | 717 | WP_160165226.1 | portal protein | - |
| LPH44_RS05360 (LPH44_05360) | 1255150..1256232 | - | 1083 | WP_051482382.1 | phage terminase large subunit | - |
| LPH44_RS05365 (LPH44_05365) | 1256253..1256654 | - | 402 | WP_114867107.1 | lysozyme | - |
| LPH44_RS05370 (LPH44_05370) | 1256907..1257242 | - | 336 | WP_038273322.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LPH44_RS05375 (LPH44_05375) | 1257239..1257493 | - | 255 | WP_038273324.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LPH44_RS05380 (LPH44_05380) | 1257595..1258293 | - | 699 | WP_114867108.1 | hypothetical protein | - |
| LPH44_RS05385 (LPH44_05385) | 1258250..1259443 | + | 1194 | WP_230428203.1 | hypothetical protein | - |
| LPH44_RS05390 (LPH44_05390) | 1259447..1259719 | + | 273 | WP_114867070.1 | VRR-NUC domain-containing protein | - |
| LPH44_RS05395 (LPH44_05395) | 1259721..1260071 | - | 351 | WP_114867109.1 | DUF1640 domain-containing protein | - |
| LPH44_RS05400 (LPH44_05400) | 1260147..1261493 | + | 1347 | WP_114867110.1 | DEAD/DEAH box helicase | - |
| LPH44_RS05405 (LPH44_05405) | 1261508..1262392 | + | 885 | WP_114867111.1 | hypothetical protein | - |
| LPH44_RS05410 (LPH44_05410) | 1262456..1262992 | + | 537 | WP_038273354.1 | Fimbrial protein | VF |
| LPH44_RS05415 (LPH44_05415) | 1263043..1263279 | + | 237 | WP_069636229.1 | DUF4224 domain-containing protein | - |
| LPH44_RS05420 (LPH44_05420) | 1263292..1264353 | + | 1062 | WP_038273275.1 | hypothetical protein ; Integrase | Integrase |
| LPH44_RS05425 (LPH44_05425) | 1264620..1265384 | - | 765 | WP_038272090.1 | Hydroxyacylglutathione hydrolase | VF |
| LPH44_RS05430 (LPH44_05430) | 1265429..1266043 | + | 615 | WP_230428204.1 | class I SAM-dependent methyltransferase | - |
| LPH44_RS05435 (LPH44_05435) | 1266057..1266509 | + | 453 | WP_038272094.1 | ribonuclease HI | - |
| LPH44_RS05440 (LPH44_05440) | 1266506..1267228 | + | 723 | WP_038272095.1 | DNA polymerase III subunit epsilon | - |
| LPH44_RS05445 (LPH44_05445) | 1267279..1267995 | - | 717 | WP_038272160.1 | Protein phosphatase PrpC | VF |
| LPH44_RS05455 (LPH44_05455) | 1269941..1270348 | + | 408 | WP_038272096.1 | DUF6165 family protein | - |
| LPH44_RS05460 (LPH44_05460) | 1270366..1271418 | - | 1053 | WP_038272098.1 | glycosyltransferase family 9 protein | - |
| LPH44_RS05465 (LPH44_05465) | 1271440..1272189 | + | 750 | WP_038272101.1 | 3-deoxy-D-manno-octulosonic acid kinase | - |
| LPH44_RS05470 (LPH44_05470) | 1272761..1274665 | + | 1905 | WP_230428205.1 | glucans biosynthesis glucosyltransferase MdoH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|