MGE detailed information
MGE type: Prophage MGE length: 25133 bp
Accession: NZ_CP087680 Location: 498545..523677 Organism: Xylella taiwanensis strain PLS407 Replicon: chromosome
Accession: NZ_CP087680 Location: 498545..523677 Organism: Xylella taiwanensis strain PLS407 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH41_RS02290 (LPH41_02290) | 494294..495859 | - | 1566 | WP_051482376.1 | DHA2 family efflux MFS transporter permease subunit | - |
| LPH41_RS02295 (LPH41_02295) | 495869..497047 | - | 1179 | WP_038272696.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LPH41_RS02300 (LPH41_02300) | 497058..498548 | - | 1491 | WP_038272685.1 | efflux transporter outer membrane subunit | - |
| LPH41_RS02305 (LPH41_02305) | 498545..498976 | - | 432 | WP_038272687.1 | MarR family transcriptional regulator | - |
| LPH41_RS02310 (LPH41_02310) | 499374..501623 | + | 2250 | WP_038272689.1 | DNA topoisomerase IV subunit A | - |
| LPH41_RS02315 (LPH41_02315) | 503622..503813 | - | 192 | WP_038270700.1 | hypothetical protein | - |
| LPH41_RS02320 (LPH41_02320) | 504423..506288 | - | 1866 | WP_038270699.1 | RNA polymerase sigma factor RpoD | - |
| LPH41_RS02325 (LPH41_02325) | 506686..507612 | + | 927 | WP_038270698.1 | lauroyl acyltransferase | - |
| LPH41_RS02330 (LPH41_02330) | 508266..508838 | - | 573 | WP_051482276.1 | hypothetical protein | - |
| LPH41_RS02335 (LPH41_02335) | 508848..509192 | - | 345 | WP_038270697.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LPH41_RS02340 (LPH41_02340) | 509196..509576 | - | 381 | WP_038270696.1 | hypothetical protein | - |
| LPH41_RS02345 (LPH41_02345) | 509754..510581 | - | 828 | WP_038270695.1 | DUF2303 family protein | - |
| LPH41_RS02350 (LPH41_02350) | 510585..510917 | - | 333 | WP_038270693.1 | hypothetical protein | - |
| LPH41_RS02355 (LPH41_02355) | 511519..511869 | + | 351 | WP_230428181.1 | hypothetical protein | - |
| LPH41_RS02360 (LPH41_02360) | 511980..512171 | - | 192 | WP_051482275.1 | hypothetical protein | - |
| LPH41_RS02365 (LPH41_02365) | 512249..512554 | - | 306 | WP_051482274.1 | hypothetical protein | - |
| LPH41_RS02370 (LPH41_02370) | 512992..513198 | + | 207 | WP_038270689.1 | phage terminase large subunit family protein | - |
| LPH41_RS02375 (LPH41_02375) | 513182..513823 | + | 642 | WP_038270687.1 | phage terminase large subunit family protein | - |
| LPH41_RS02380 (LPH41_02380) | 513842..514291 | + | 450 | WP_230428180.1 | hypothetical protein | - |
| LPH41_RS02385 (LPH41_02385) | 514390..515774 | + | 1385 | Protein_467 | phage major capsid protein | - |
| LPH41_RS02390 (LPH41_02390) | 515813..516061 | + | 249 | WP_038270686.1 | hypothetical protein | - |
| LPH41_RS02395 (LPH41_02395) | 516188..516418 | + | 231 | WP_230428500.1 | hypothetical protein | - |
| LPH41_RS02400 (LPH41_02400) | 516399..516692 | + | 294 | WP_038270685.1 | hypothetical protein | - |
| LPH41_RS02405 (LPH41_02405) | 516782..517231 | + | 450 | WP_230428179.1 | hypothetical protein | - |
| LPH41_RS02410 (LPH41_02410) | 517207..517860 | + | 654 | WP_230428178.1 | hypothetical protein | - |
| LPH41_RS11955 | 517860..518069 | + | 210 | WP_230428177.1 | phage baseplate assembly protein V | - |
| LPH41_RS11960 | 518038..518319 | + | 282 | WP_268980389.1 | phage baseplate assembly protein V | - |
| LPH41_RS02420 (LPH41_02420) | 518329..518628 | - | 300 | WP_081755408.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LPH41_RS02425 (LPH41_02425) | 518632..518910 | - | 279 | WP_038270683.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LPH41_RS02430 (LPH41_02430) | 519011..519340 | + | 330 | WP_230428175.1 | GPW/gp25 family protein | - |
| LPH41_RS02435 (LPH41_02435) | 519340..520233 | + | 894 | WP_038270682.1 | baseplate J/gp47 family protein | - |
| LPH41_RS02440 (LPH41_02440) | 520304..520708 | + | 405 | Protein_479 | phage tail protein I | - |
| LPH41_RS02445 (LPH41_02445) | 520781..521035 | + | 255 | WP_230428278.1 | phage tail protein | - |
| LPH41_RS02450 (LPH41_02450) | 521032..521112 | + | 81 | Protein_481 | tail protein X | - |
| LPH41_RS02455 (LPH41_02455) | 521300..521896 | + | 597 | WP_162814073.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| LPH41_RS02460 (LPH41_02460) | 522583..523629 | - | 1047 | WP_038270717.1 | Sulfate/thiosulfate import ATP-binding protein CysA | VF |
| LPH41_RS02465 (LPH41_02465) | 523643..524587 | - | 945 | WP_051482278.1 | sulfate ABC transporter permease subunit CysW | - |
| LPH41_RS02470 (LPH41_02470) | 524599..525459 | - | 861 | WP_038270680.1 | sulfate ABC transporter permease subunit CysT | - |
| LPH41_RS02475 (LPH41_02475) | 525463..526566 | - | 1104 | WP_038270679.1 | sulfate ABC transporter substrate-binding protein | - |
| LPH41_RS02480 (LPH41_02480) | 526903..527148 | - | 246 | WP_230428174.1 | hypothetical protein | - |
| LPH41_RS02485 (LPH41_02485) | 527350..527508 | - | 159 | WP_160165146.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|