MGE detailed information
MGE type: Genomic_island MGE length: 14425 bp
Accession: NZ_CP087678 Location: 2785921..2800345 Organism: Xylella taiwanensis strain PLS206 Replicon: chromosome
Accession: NZ_CP087678 Location: 2785921..2800345 Organism: Xylella taiwanensis strain PLS206 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH42_RS11700 (LPH42_11700) | 2782227..2782973 | - | 747 | WP_114867125.1 | superoxide dismutase | - |
| LPH42_RS11705 (LPH42_11705) | 2783634..2784440 | + | 807 | WP_038271356.1 | TatD family hydrolase | - |
| LPH42_RS11710 (LPH42_11710) | 2784546..2785559 | + | 1014 | WP_038271357.1 | zonular occludens toxin domain-containing protein | - |
| LPH42_RS11715 (LPH42_11715) | 2785605..2785844 | - | 240 | WP_038271358.1 | hypothetical protein | - |
| LPH42_RS11720 (LPH42_11720) | 2785921..2786265 | - | 345 | WP_038271360.1 | DUF3653 domain-containing protein | - |
| LPH42_RS11725 (LPH42_11725) | 2786324..2786809 | - | 486 | WP_038271361.1 | DUF3693 domain-containing protein | - |
| LPH42_RS11730 (LPH42_11730) | 2786880..2787041 | + | 162 | WP_160165182.1 | hypothetical protein | - |
| LPH42_RS11735 (LPH42_11735) | 2787045..2787308 | + | 264 | WP_162814095.1 | hypothetical protein | - |
| LPH42_RS11740 (LPH42_11740) | 2787357..2787557 | + | 201 | WP_038273077.1 | hypothetical protein | - |
| LPH42_RS11745 (LPH42_11745) | 2787677..2787820 | + | 144 | WP_160165233.1 | hypothetical protein | - |
| LPH42_RS11750 (LPH42_11750) | 2788017..2788604 | + | 588 | WP_038273076.1 | hypothetical protein | - |
| LPH42_RS11755 (LPH42_11755) | 2788880..2789194 | + | 315 | WP_230428211.1 | hypothetical protein | - |
| LPH42_RS11760 (LPH42_11760) | 2789197..2789403 | + | 207 | WP_038273075.1 | hypothetical protein | - |
| LPH42_RS11765 (LPH42_11765) | 2789412..2789648 | + | 237 | WP_230428212.1 | major capsid protein | - |
| LPH42_RS11770 (LPH42_11770) | 2789828..2791213 | + | 1386 | WP_230428213.1 | furin-like repeat-containing protein | - |
| LPH42_RS11775 (LPH42_11775) | 2791216..2791560 | + | 345 | WP_038273069.1 | DUF2523 family protein | - |
| LPH42_RS11780 (LPH42_11780) | 2791573..2792700 | + | 1128 | WP_114867127.1 | zonular occludens toxin domain-containing protein | - |
| LPH42_RS11785 (LPH42_11785) | 2792790..2793062 | + | 273 | WP_038272460.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LPH42_RS11790 (LPH42_11790) | 2793059..2793475 | + | 417 | WP_038272463.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LPH42_RS11795 (LPH42_11795) | 2793538..2793882 | - | 345 | WP_038272464.1 | DUF3653 domain-containing protein | - |
| LPH42_RS11800 (LPH42_11800) | 2793873..2794118 | - | 246 | WP_230428284.1 | hypothetical protein | - |
| LPH42_RS11805 (LPH42_11805) | 2794702..2795316 | - | 615 | WP_081755477.1 | HNH endonuclease | - |
| LPH42_RS11810 (LPH42_11810) | 2795592..2796065 | - | 474 | WP_038272510.1 | LEA type 2 family protein | - |
| LPH42_RS11815 (LPH42_11815) | 2796910..2798121 | + | 1212 | WP_038272508.1 | signal recognition particle-docking protein FtsY | - |
| LPH42_RS11820 (LPH42_11820) | 2798213..2799262 | + | 1050 | WP_038272506.1 | A/G-specific adenine glycosylase | - |
| LPH42_RS11825 (LPH42_11825) | 2799297..2799569 | + | 273 | WP_038272505.1 | oxidative damage protection protein | - |
| LPH42_RS11830 (LPH42_11830) | 2799866..2800345 | + | 480 | WP_081755474.1 | DUF2726 domain-containing protein | - |
| LPH42_RS11835 (LPH42_11835) | 2802226..2802960 | + | 735 | WP_038272500.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| LPH42_RS11840 (LPH42_11840) | 2803065..2803586 | + | 522 | WP_038272498.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LPH42_RS11845 (LPH42_11845) | 2803675..2804259 | + | 585 | WP_038272496.1 | Holliday junction branch migration protein RuvA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|