MGE detailed information
MGE type: Prophage MGE length: 19084 bp
Accession: NZ_CP087678 Location: 2622153..2641236 Organism: Xylella taiwanensis strain PLS206 Replicon: chromosome
Accession: NZ_CP087678 Location: 2622153..2641236 Organism: Xylella taiwanensis strain PLS206 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH42_RS10880 (LPH42_10880) | 2617423..2618619 | - | 1197 | WP_038272824.1 | GTP cyclohydrolase II RibA | - |
| LPH42_RS10885 (LPH42_10885) | 2618711..2618875 | - | 165 | WP_160165225.1 | hypothetical protein | - |
| LPH42_RS10890 (LPH42_10890) | 2621292..2621843 | + | 552 | WP_038272837.1 | TlpA disulfide reductase family protein | - |
| LPH42_RS10895 (LPH42_10895) | 2622153..2623361 | + | 1209 | WP_038272829.1 | hypothetical protein | - |
| LPH42_RS10900 (LPH42_10900) | 2623863..2624183 | - | 321 | WP_038272832.1 | hypothetical protein | - |
| LPH42_RS10905 (LPH42_10905) | 2624255..2624971 | - | 717 | WP_160165226.1 | portal protein | - |
| LPH42_RS10910 (LPH42_10910) | 2624968..2626074 | - | 1107 | WP_114867106.1 | phage terminase large subunit | - |
| LPH42_RS10915 (LPH42_10915) | 2626071..2626472 | - | 402 | WP_114867107.1 | lysozyme | - |
| LPH42_RS10920 (LPH42_10920) | 2626725..2627060 | - | 336 | WP_038273322.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LPH42_RS10925 (LPH42_10925) | 2627057..2627311 | - | 255 | WP_038273324.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LPH42_RS10930 (LPH42_10930) | 2627413..2628111 | - | 699 | WP_114867108.1 | hypothetical protein | - |
| LPH42_RS10935 (LPH42_10935) | 2628068..2629261 | + | 1194 | WP_230428203.1 | hypothetical protein | - |
| LPH42_RS10940 (LPH42_10940) | 2629265..2629537 | + | 273 | WP_114867070.1 | VRR-NUC domain-containing protein | - |
| LPH42_RS10945 (LPH42_10945) | 2629539..2629889 | - | 351 | WP_114867109.1 | DUF1640 domain-containing protein | - |
| LPH42_RS10950 (LPH42_10950) | 2629965..2631311 | + | 1347 | WP_114867110.1 | DEAD/DEAH box helicase | - |
| LPH42_RS10955 (LPH42_10955) | 2631326..2632210 | + | 885 | WP_114867111.1 | hypothetical protein | - |
| LPH42_RS10960 (LPH42_10960) | 2632274..2632810 | + | 537 | WP_038273354.1 | hypothetical protein | VF |
| LPH42_RS10965 (LPH42_10965) | 2632861..2633097 | + | 237 | WP_069636229.1 | DUF4224 domain-containing protein | - |
| LPH42_RS10970 (LPH42_10970) | 2633110..2634171 | + | 1062 | WP_038273275.1 | hypothetical protein ; Integrase | Integrase |
| LPH42_RS10975 (LPH42_10975) | 2634438..2635202 | - | 765 | WP_038272090.1 | Hydroxyacylglutathione hydrolase | VF |
| LPH42_RS10980 (LPH42_10980) | 2635247..2635861 | + | 615 | WP_230428204.1 | class I SAM-dependent methyltransferase | - |
| LPH42_RS10985 (LPH42_10985) | 2635875..2636327 | + | 453 | WP_038272094.1 | ribonuclease HI | - |
| LPH42_RS10990 (LPH42_10990) | 2636324..2637046 | + | 723 | WP_038272095.1 | DNA polymerase III subunit epsilon | - |
| LPH42_RS10995 (LPH42_10995) | 2637097..2637813 | - | 717 | WP_038272160.1 | hypothetical protein | VF |
| LPH42_RS11005 (LPH42_11005) | 2639759..2640166 | + | 408 | WP_038272096.1 | DUF6165 family protein | - |
| LPH42_RS11010 (LPH42_11010) | 2640184..2641236 | - | 1053 | WP_038272098.1 | hypothetical protein | VF |
| LPH42_RS11015 (LPH42_11015) | 2641258..2642007 | + | 750 | WP_038272101.1 | 3-deoxy-D-manno-octulosonic acid kinase | - |
| LPH42_RS11020 (LPH42_11020) | 2642579..2644483 | + | 1905 | WP_230428205.1 | glucans biosynthesis glucosyltransferase MdoH | - |
| LPH42_RS11025 (LPH42_11025) | 2644516..2645187 | + | 672 | WP_038272161.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|