MGE detailed information
MGE type: Prophage MGE length: 24304 bp
Accession: NZ_CP087678 Location: 2270042..2294345 Organism: Xylella taiwanensis strain PLS206 Replicon: chromosome
Accession: NZ_CP087678 Location: 2270042..2294345 Organism: Xylella taiwanensis strain PLS206 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH42_RS09325 (LPH42_09325) | 2266211..2266369 | + | 159 | WP_160165146.1 | hypothetical protein | - |
| LPH42_RS09330 (LPH42_09330) | 2266571..2266816 | + | 246 | WP_230428174.1 | hypothetical protein | - |
| LPH42_RS09335 (LPH42_09335) | 2267153..2268256 | + | 1104 | WP_038270679.1 | sulfate ABC transporter substrate-binding protein | - |
| LPH42_RS09340 (LPH42_09340) | 2268260..2269120 | + | 861 | WP_038270680.1 | sulfate ABC transporter permease subunit CysT | - |
| LPH42_RS09345 (LPH42_09345) | 2269132..2270076 | + | 945 | WP_051482278.1 | sulfate ABC transporter permease subunit CysW | - |
| LPH42_RS09350 (LPH42_09350) | 2270090..2271136 | + | 1047 | WP_038270717.1 | putative diguanylate cyclase DgcJ | VF |
| LPH42_RS09355 (LPH42_09355) | 2271823..2272419 | - | 597 | WP_162814073.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| LPH42_RS09360 (LPH42_09360) | 2272631..2272687 | - | 57 | Protein_1845 | phage tail protein | - |
| LPH42_RS09365 (LPH42_09365) | 2272684..2272938 | - | 255 | WP_230428278.1 | phage tail protein | - |
| LPH42_RS09370 (LPH42_09370) | 2273011..2273415 | - | 405 | Protein_1847 | phage tail protein I | - |
| LPH42_RS09375 (LPH42_09375) | 2273486..2274379 | - | 894 | WP_038270682.1 | baseplate J/gp47 family protein | - |
| LPH42_RS09380 (LPH42_09380) | 2274379..2274708 | - | 330 | WP_230428175.1 | GPW/gp25 family protein | - |
| LPH42_RS09385 (LPH42_09385) | 2274809..2275087 | + | 279 | WP_038270683.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LPH42_RS09390 (LPH42_09390) | 2275091..2275390 | + | 300 | WP_081755408.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| LPH42_RS09395 (LPH42_09395) | 2275400..2275696 | - | 297 | WP_230428176.1 | phage baseplate assembly protein V | - |
| LPH42_RS09400 (LPH42_09400) | 2275650..2275859 | - | 210 | WP_230428177.1 | phage baseplate assembly protein V | - |
| LPH42_RS09405 (LPH42_09405) | 2275859..2276512 | - | 654 | WP_230428178.1 | hypothetical protein | - |
| LPH42_RS09410 (LPH42_09410) | 2276488..2276937 | - | 450 | WP_230428179.1 | hypothetical protein | - |
| LPH42_RS09415 (LPH42_09415) | 2277027..2277320 | - | 294 | WP_038270685.1 | hypothetical protein | - |
| LPH42_RS09420 (LPH42_09420) | 2277658..2277906 | - | 249 | WP_038270686.1 | hypothetical protein | - |
| LPH42_RS09425 (LPH42_09425) | 2277945..2279329 | - | 1385 | Protein_1858 | phage major capsid protein | - |
| LPH42_RS09430 (LPH42_09430) | 2279428..2279877 | - | 450 | WP_230428180.1 | hypothetical protein | - |
| LPH42_RS09435 (LPH42_09435) | 2279896..2280537 | - | 642 | WP_038270687.1 | phage terminase large subunit family protein | - |
| LPH42_RS09440 (LPH42_09440) | 2280521..2280727 | - | 207 | WP_038270689.1 | phage terminase large subunit family protein | - |
| LPH42_RS09445 (LPH42_09445) | 2281165..2281470 | + | 306 | WP_051482274.1 | hypothetical protein | - |
| LPH42_RS09450 (LPH42_09450) | 2281548..2281739 | + | 192 | WP_051482275.1 | hypothetical protein | - |
| LPH42_RS09455 (LPH42_09455) | 2281850..2282200 | - | 351 | WP_230428181.1 | hypothetical protein | - |
| LPH42_RS09460 (LPH42_09460) | 2282802..2283134 | + | 333 | WP_038270693.1 | hypothetical protein | - |
| LPH42_RS09465 (LPH42_09465) | 2283138..2283965 | + | 828 | WP_038270695.1 | DUF2303 family protein | - |
| LPH42_RS09470 (LPH42_09470) | 2284122..2284523 | + | 402 | WP_160165148.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LPH42_RS09475 (LPH42_09475) | 2284527..2284871 | + | 345 | WP_038270697.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LPH42_RS09480 (LPH42_09480) | 2284881..2285453 | + | 573 | WP_051482276.1 | hypothetical protein | - |
| LPH42_RS09485 (LPH42_09485) | 2286107..2287033 | - | 927 | WP_038270698.1 | lauroyl acyltransferase | - |
| LPH42_RS09490 (LPH42_09490) | 2287431..2289296 | + | 1866 | WP_038270699.1 | RNA polymerase sigma factor RpoD | - |
| LPH42_RS09495 (LPH42_09495) | 2289906..2290097 | + | 192 | WP_038270700.1 | hypothetical protein | - |
| LPH42_RS09500 (LPH42_09500) | 2292096..2294345 | - | 2250 | WP_038272689.1 | DNA topoisomerase IV subunit A | - |
| LPH42_RS09505 (LPH42_09505) | 2294743..2295174 | + | 432 | WP_038272687.1 | MarR family transcriptional regulator | - |
| LPH42_RS09510 (LPH42_09510) | 2295171..2296661 | + | 1491 | WP_038272685.1 | efflux transporter outer membrane subunit | - |
| LPH42_RS09515 (LPH42_09515) | 2296672..2297850 | + | 1179 | WP_038272696.1 | efflux RND transporter periplasmic adaptor subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|