NZ_CP0876651..141469

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 141469 bp
Accession: NZ_CP087665        Location: 1..141469         Organism: Klebsiella pneumoniae subsp. pneumoniae strain DD01845       Replicon: plasmid pDD01845-2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LMH56_RS27930 (LMH56_27930) 19..894 + 876 WP_004098982.1 replication initiation protein -
LMH56_RS27935 (LMH56_27935) 1567..2193 + 627 WP_004197649.1 Chromosome-partitioning ATPase Soj VF
LMH56_RS27940 (LMH56_27940) 2190..2492 + 303 WP_004197636.1 hypothetical protein -
LMH56_RS27945 (LMH56_27945) 2940..3734 - 795 WP_004197635.1 site-specific integrase -
LMH56_RS27950 (LMH56_27950) 3932..4948 - 1017 WP_017899884.1 hypothetical protein -
LMH56_RS27955 (LMH56_27955) 4959..5273 - 315 WP_053389906.1 hypothetical protein -
LMH56_RS27960 (LMH56_27960) 5300..5695 - 396 WP_017899885.1 hypothetical protein -
LMH56_RS27965 (LMH56_27965) 5864..6169 - 306 WP_013023785.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
LMH56_RS27970 (LMH56_27970) 6171..6389 - 219 WP_001568025.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
LMH56_RS27975 (LMH56_27975) 7207..7497 - 291 WP_013023783.1 hypothetical protein -
LMH56_RS27980 (LMH56_27980) 7494..8621 - 1128 WP_013023782.1 DUF4238 domain-containing protein -
LMH56_RS27985 (LMH56_27985) 8655..10178 - 1524 WP_223174996.1 hypothetical protein -
LMH56_RS27990 (LMH56_27990) 10454..11233 - 780 WP_013023780.1 hypothetical protein -
LMH56_RS27995 (LMH56_27995) 11246..11746 - 501 WP_013023779.1 HEPN family nuclease -
LMH56_RS28000 (LMH56_28000) 12021..12284 + 264 WP_013023778.1 hypothetical protein -
LMH56_RS28005 (LMH56_28005) 12281..12847 + 567 WP_013023777.1 hypothetical protein -
LMH56_RS28010 (LMH56_28010) 12878..13372 + 495 WP_013023776.1 hypothetical protein -
LMH56_RS28015 (LMH56_28015) 13416..13784 + 369 WP_048337418.1 hypothetical protein -
LMH56_RS28020 (LMH56_28020) 13818..14021 + 204 WP_004098931.1 HHA domain-containing protein -
LMH56_RS28025 (LMH56_28025) 14070..14327 + 258 WP_017899889.1 hypothetical protein -
LMH56_RS28030 (LMH56_28030) 14403..14657 + 255 WP_009653916.1 hypothetical protein -
LMH56_RS28035 (LMH56_28035) 14793..15569 - 777 WP_013609504.1 DUF2971 domain-containing protein -
LMH56_RS28040 (LMH56_28040) 15810..16133 - 324 WP_017899891.1 hypothetical protein -
LMH56_RS28045 (LMH56_28045) 16312..16581 - 270 Protein_23 SOS response-associated peptidase family protein -
LMH56_RS28050 (LMH56_28050) 16717..16884 + 168 Protein_24 IS5/IS1182 family transposase -
LMH56_RS28055 (LMH56_28055) 16940..17089 + 150 Protein_25 IS110 family transposase -
LMH56_RS28060 (LMH56_28060) 17372..18553 + 1182 WP_013023770.1 DUF4268 domain-containing protein -
LMH56_RS28065 (LMH56_28065) 19745..20602 - 858 WP_013023768.1 incFII family plasmid replication initiator RepA -
LMH56_RS28075 (LMH56_28075) 20904..21173 - 270 WP_013609506.1 replication regulatory protein RepA -
LMH56_RS28080 (LMH56_28080) 21291..21800 - 510 WP_052145515.1 Phospholipase D VF
LMH56_RS28085 (LMH56_28085) 21974..23551 - 1578 WP_001323889.1 Aerotaxis receptor VF
LMH56_RS28090 (LMH56_28090) 23875..24579 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH56_RS28095 (LMH56_28095) 24769..25584 - 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
LMH56_RS28100 (LMH56_28100) 25735..26439 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH56_RS28105 (LMH56_28105) 26629..27444 - 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
LMH56_RS28110 (LMH56_28110) 27595..28299 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH56_RS28115 (LMH56_28115) 28489..29304 - 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
LMH56_RS28120 (LMH56_28120) 29455..30159 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH56_RS28125 (LMH56_28125) 30220..31056 - 837 WP_000480968.1 hypothetical protein ARG
LMH56_RS28130 (LMH56_28130) 31056..31859 - 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
LMH56_RS28135 (LMH56_28135) 31920..32735 - 816 WP_001043265.1 Dihydropteroate synthase ARG
LMH56_RS28140 (LMH56_28140) 33044..33895 - 852 WP_000240536.1 replication protein C, IncQ-type -
LMH56_RS28145 (LMH56_28145) 33882..34601 - 720 Protein_42 helicase RepA family protein -
LMH56_RS28150 (LMH56_28150) 34651..35355 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH56_RS28155 (LMH56_28155) 35506..36321 + 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
LMH56_RS28160 (LMH56_28160) 36511..37215 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH56_RS28165 (LMH56_28165) 37280..37633 - 354 Protein_46 IS6 family transposase IS15DI Transposase
LMH56_RS28170 (LMH56_28170) 37696..37989 - 294 Protein_47 tunicamycin resistance protein -
LMH56_RS28175 (LMH56_28175) 38002..38862 - 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
LMH56_RS28180 (LMH56_28180) 39095..39799 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH56_RS28185 (LMH56_28185) 40270..41283 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
LMH56_RS28190 (LMH56_28190) 41575..42129 + 555 WP_063840321.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
LMH56_RS28195 (LMH56_28195) 42226..42678 + 453 WP_001749986.1 hypothetical protein ARG
LMH56_RS28200 (LMH56_28200) 42811..43284 + 474 WP_001749985.1 Dihydrofolate reductase type 1 ARG
LMH56_RS28205 (LMH56_28205) 43465..44310 + 846 WP_001749984.1 Streptomycin 3''-adenylyltransferase ARG
LMH56_RS28210 (LMH56_28210) 44427..44774 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
LMH56_RS28215 (LMH56_28215) 44768..45607 + 840 WP_000259031.1 Dihydropteroate synthase ARG
LMH56_RS28220 (LMH56_28220) 45735..46235 + 501 WP_000376623.1 GNAT family N-acetyltransferase -
LMH56_RS28225 (LMH56_28225) 46556..46624 + 69 Protein_58 EAL domain-containing protein -
LMH56_RS28230 (LMH56_28230) 46742..47506 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
LMH56_RS28235 (LMH56_28235) 47999..48583 - 585 WP_001137892.1 macrolide-binding transcriptional repressor MphR(A) -
LMH56_RS28240 (LMH56_28240) 48583..49821 - 1239 WP_000004159.1 macrolide resistance MFS transporter Mrx(A) -
LMH56_RS28245 (LMH56_28245) 49818..50723 - 906 WP_000219391.1 hypothetical protein ARG
LMH56_RS28250 (LMH56_28250) 50845..51549 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LMH56_RS28255 (LMH56_28255) 51614..51868 + 255 Protein_64 Tn3 family transposase -
LMH56_RS28260 (LMH56_28260) 51926..52168 + 243 WP_000844627.1 transposase -
LMH56_RS28265 (LMH56_28265) 52200..52850 - 651 WP_000164043.1 tetracycline resistance transcriptional repressor TetR(A) -
LMH56_RS28270 (LMH56_28270) 52956..54155 + 1200 WP_000804063.1 Tetracycline resistance protein, class C ARG
LMH56_RS28275 (LMH56_28275) 54122..54310 - 189 Protein_68 IS91 family transposase -
LMH56_RS28280 (LMH56_28280) 54422..54727 - 306 WP_001255015.1 HTH-type transcriptional regulator CynR VF
LMH56_RS28285 (LMH56_28285) 54755..55969 - 1215 WP_000214121.1 Bicyclomycin resistance protein ARG
LMH56_RS28290 (LMH56_28290) 56186..56821 - 636 WP_001253263.1 DUF3363 domain-containing protein -
LMH56_RS28295 (LMH56_28295) 56916..59921 - 3006 WP_247284842.1 Tn3 family transposase TnpA_Tn3 Transposase
LMH56_RS28300 (LMH56_28300) 60085..60642 + 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
LMH56_RS28305 (LMH56_28305) 60825..61685 + 861 WP_000027057.1 Beta-lactamase TEM ARG
LMH56_RS28310 (LMH56_28310) 61944..62420 + 477 WP_013023839.1 WbuC family cupin fold metalloprotein -
LMH56_RS28315 (LMH56_28315) 62467..63342 - 876 WP_011091028.1 Beta-lactamase CTX-M-1 ARG
LMH56_RS28320 (LMH56_28320) 63677..63871 - 195 Protein_77 IS1380 family transposase -
LMH56_RS28325 (LMH56_28325) 63928..64625 + 698 WP_223216367.1 IS1 family transposase IS1G Transposase
LMH56_RS28330 (LMH56_28330) 64641..65546 - 906 Protein_79 IS1380 family transposase ISEcp1 Transposase
LMH56_RS28335 (LMH56_28335) 65785..66527 + 743 Protein_80 ISKra4 family transposase ISKpn19 Transposase
LMH56_RS28340 (LMH56_28340) 66560..66988 + 429 Protein_81 Tn3 family transposase TnpR_ISMex22 Transposase
LMH56_RS28345 (LMH56_28345) 67307..67963 - 657 WP_001516695.1 Pentapeptide repeat protein ARG
LMH56_RS28350 (LMH56_28350) 68245..69636 - 1392 WP_001493761.1 ISKra4 family transposase ISKpn19 Transposase
LMH56_RS28355 (LMH56_28355) 69673..70245 - 573 WP_001493762.1 Tn3 family transposase TnpR_ISPa40 Transposase
LMH56_RS28360 (LMH56_28360) 70382..70927 - 546 WP_001493763.1 plasmid pRiA4b ORF-3 family protein -
LMH56_RS28365 (LMH56_28365) 71023..71598 + 576 WP_077256884.1 DUF4113 domain-containing protein -
LMH56_RS28370 (LMH56_28370) 71745..72026 - 282 WP_000780222.1 helix-turn-helix transcriptional regulator -
LMH56_RS28375 (LMH56_28375) 72007..72336 - 330 WP_000493286.1 type II toxin-antitoxin system RelE/ParE family toxin -
LMH56_RS28380 (LMH56_28380) 72572..72829 + 258 WP_048337415.1 hypothetical protein -
LMH56_RS28385 (LMH56_28385) 72863..73567 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
LMH56_RS28390 (LMH56_28390) 73614..73898 - 285 WP_247476052.1 hypothetical protein -
LMH56_RS28395 (LMH56_28395) 73895..74545 - 651 WP_014343480.1 DUF2726 domain-containing protein -
LMH56_RS28400 (LMH56_28400) 74601..75245 - 645 WP_014343481.1 hypothetical protein -
LMH56_RS28405 (LMH56_28405) 75295..75897 - 603 WP_013023836.1 PIN domain-containing protein -
LMH56_RS28410 (LMH56_28410) 76058..76651 - 594 WP_013609537.1 fertility inhibition protein FinO -
LMH56_RS28415 (LMH56_28415) 76723..77448 - 726 WP_013023834.1 type-F conjugative transfer system pilin acetylase TraX -
LMH56_RS28420 (LMH56_28420) 77529..82790 - 5262 WP_047665818.1 Multifunctional conjugation protein TraI Relaxase
LMH56_RS28425 (LMH56_28425) 82790..85102 - 2313 WP_013023832.1 type IV conjugative transfer system coupling protein TraD -
LMH56_RS28430 (LMH56_28430) 85229..85918 - 690 WP_013023831.1 hypothetical protein -
LMH56_RS28435 (LMH56_28435) 86111..86842 - 732 WP_013023830.1 conjugal transfer complement resistance protein TraT -
LMH56_RS28440 (LMH56_28440) 87028..87561 - 534 WP_014343486.1 conjugal transfer protein TraS -
LMH56_RS28445 (LMH56_28445) 87564..87866 - 303 WP_247476054.1 hypothetical protein -
LMH56_RS28450 (LMH56_28450) 87848..88828 - 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
LMH56_RS28455 (LMH56_28455) 88878..91613 - 2736 Protein_104 conjugal transfer mating-pair stabilization protein TraG -
LMH56_RS28460 (LMH56_28460) 91613..92992 - 1380 WP_014343487.1 conjugal transfer pilus assembly protein TraH -
LMH56_RS28465 (LMH56_28465) 92970..93413 - 444 WP_013023828.1 F-type conjugal transfer protein TrbF -
LMH56_RS28470 (LMH56_28470) 93459..94016 - 558 WP_013214031.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
LMH56_RS28475 (LMH56_28475) 93988..94227 - 240 WP_004144400.1 type-F conjugative transfer system pilin chaperone TraQ -
LMH56_RS28480 (LMH56_28480) 94238..94990 - 753 WP_048337413.1 type-F conjugative transfer system pilin assembly protein TraF -
LMH56_RS28485 (LMH56_28485) 95011..95337 - 327 WP_004152676.1 hypothetical protein -
LMH56_RS28490 (LMH56_28490) 95350..95598 - 249 WP_004152675.1 hypothetical protein -
LMH56_RS28495 (LMH56_28495) 95576..95830 - 255 WP_004152674.1 conjugal transfer protein TrbE -
LMH56_RS28500 (LMH56_28500) 95862..97817 - 1956 WP_013023827.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
LMH56_RS28505 (LMH56_28505) 97876..98514 - 639 WP_011977786.1 type-F conjugative transfer system pilin assembly protein TrbC -
LMH56_RS28510 (LMH56_28510) 98527..99516 - 990 WP_009309872.1 conjugal transfer pilus assembly protein TraU -
LMH56_RS28515 (LMH56_28515) 99513..99902 - 390 WP_004194992.1 hypothetical protein -
LMH56_RS28520 (LMH56_28520) 99944..100570 - 627 WP_009309871.1 type-F conjugative transfer system protein TraW -
LMH56_RS28525 (LMH56_28525) 100570..100959 - 390 WP_004197815.1 type-F conjugative transfer system protein TrbI -
LMH56_RS28530 (LMH56_28530) 100959..103598 - 2640 WP_013023824.1 type IV secretion system protein TraC -
LMH56_RS28535 (LMH56_28535) 103670..104068 - 399 WP_013609531.1 hypothetical protein -
LMH56_RS28540 (LMH56_28540) 104444..104848 - 405 WP_004197817.1 hypothetical protein -
LMH56_RS28545 (LMH56_28545) 104915..105226 - 312 WP_015344986.1 hypothetical protein -
LMH56_RS28550 (LMH56_28550) 105227..105445 - 219 WP_015344987.1 hypothetical protein -
LMH56_RS28555 (LMH56_28555) 105551..105961 - 411 WP_009309869.1 hypothetical protein -
LMH56_RS28560 (LMH56_28560) 106093..106677 - 585 WP_013023822.1 type IV conjugative transfer system lipoprotein TraV -
LMH56_RS28565 (LMH56_28565) 106791..108215 - 1425 WP_004194260.1 F-type conjugal transfer pilus assembly protein TraB -
LMH56_RS28570 (LMH56_28570) 108215..108955 - 741 WP_013023821.1 type-F conjugative transfer system secretin TraK -
LMH56_RS28575 (LMH56_28575) 108942..109508 - 567 WP_004144423.1 type IV conjugative transfer system protein TraE -
LMH56_RS28580 (LMH56_28580) 109528..109833 - 306 WP_004144424.1 type IV conjugative transfer system protein TraL -
LMH56_RS28585 (LMH56_28585) 109847..110215 - 369 WP_004194426.1 type IV conjugative transfer system pilin TraA -
LMH56_RS29780 110284..110484 - 201 WP_004194116.1 TraY domain-containing protein -
LMH56_RS28590 (LMH56_28590) 110570..111271 - 702 WP_004194113.1 hypothetical protein -
LMH56_RS28595 (LMH56_28595) 111501..111893 - 393 WP_004194114.1 conjugal transfer relaxosome DNA-binding protein TraM -
LMH56_RS28600 (LMH56_28600) 112325..112810 + 486 WP_001568108.1 hypothetical protein VF
LMH56_RS28605 (LMH56_28605) 112843..113172 - 330 WP_013214015.1 DUF5983 family protein -
LMH56_RS28610 (LMH56_28610) 113205..114026 - 822 WP_004152492.1 DUF932 domain-containing protein -
LMH56_RS28615 (LMH56_28615) 114834..116042 + 1209 WP_015344990.1 IS256 family transposase ISEic2 Transposase
LMH56_RS28620 (LMH56_28620) 116178..116591 - 414 WP_013023817.1 helix-turn-helix domain-containing protein -
LMH56_RS28625 (LMH56_28625) 116592..116870 - 279 WP_004152721.1 helix-turn-helix transcriptional regulator -
LMH56_RS28630 (LMH56_28630) 116860..117180 - 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
LMH56_RS28635 (LMH56_28635) 117261..117485 - 225 WP_004152719.1 hypothetical protein -
LMH56_RS28640 (LMH56_28640) 117496..117708 - 213 WP_013023815.1 hypothetical protein -
LMH56_RS28645 (LMH56_28645) 117769..118125 - 357 WP_013023814.1 hypothetical protein -
LMH56_RS28650 (LMH56_28650) 118967..119284 - 318 WP_014343505.1 hypothetical protein -
LMH56_RS28655 (LMH56_28655) 119299..119649 - 351 WP_040245917.1 hypothetical protein -
LMH56_RS28660 (LMH56_28660) 119646..119918 - 273 WP_040245921.1 hypothetical protein -
LMH56_RS28665 (LMH56_28665) 120611..120730 - 120 WP_159376494.1 type I toxin-antitoxin system Hok family toxin -
LMH56_RS28670 (LMH56_28670) 120675..120827 - 153 WP_004150508.1 DUF5431 family protein -
LMH56_RS28675 (LMH56_28675) 120997..121371 - 375 WP_014343510.1 hypothetical protein -
LMH56_RS28680 (LMH56_28680) 121427..121753 - 327 WP_013023807.1 hypothetical protein -
LMH56_RS28685 (LMH56_28685) 121750..122478 - 729 WP_001568058.1 plasmid SOS inhibition protein A -
LMH56_RS28690 (LMH56_28690) 122475..122906 - 432 WP_001568057.1 conjugation system SOS inhibitor PsiB -
LMH56_RS28695 (LMH56_28695) 122951..125008 - 2058 WP_247476056.1 ParB/RepB/Spo0J family partition protein -
LMH56_RS28700 (LMH56_28700) 125078..125326 - 249 WP_001568055.1 DUF905 domain-containing protein -
LMH56_RS28705 (LMH56_28705) 125375..125917 - 543 WP_014343512.1 single-stranded DNA-binding protein -
LMH56_RS28710 (LMH56_28710) 126747..127310 - 564 WP_004152756.1 methyltransferase -
LMH56_RS28715 (LMH56_28715) 127358..128713 - 1356 WP_065801336.1 DUF3560 domain-containing protein -
LMH56_RS28720 (LMH56_28720) 128765..128995 - 231 WP_001568051.1 hypothetical protein -
LMH56_RS28725 (LMH56_28725) 129087..129314 - 228 WP_001568050.1 hypothetical protein -
LMH56_RS28730 (LMH56_28730) 129994..130314 - 321 WP_001568049.1 hypothetical protein -
LMH56_RS28735 (LMH56_28735) 130349..130603 - 255 WP_011977779.1 DNA polymerase III subunit theta -
LMH56_RS28740 (LMH56_28740) 130791..130982 - 192 WP_001568047.1 hypothetical protein -
LMH56_RS28745 (LMH56_28745) 131025..131531 - 507 WP_013214014.1 antirestriction protein ArdA -
LMH56_RS28750 (LMH56_28750) 131574..132002 - 429 WP_004152356.1 antirestriction protein -
LMH56_RS28755 (LMH56_28755) 132683..133450 - 768 WP_013214013.1 hypothetical protein -
LMH56_RS28760 (LMH56_28760) 133504..133923 - 420 WP_001568043.1 DUF1380 domain-containing protein -
LMH56_RS28765 (LMH56_28765) 133933..134154 - 222 WP_001568042.1 hypothetical protein -
LMH56_RS28770 (LMH56_28770) 134154..134855 - 702 WP_001568041.1 DNA methylase -
LMH56_RS28775 (LMH56_28775) 134927..135096 - 170 Protein_169 hypothetical protein -
LMH56_RS28780 (LMH56_28780) 135292..135522 - 231 WP_001568040.1 hypothetical protein -
LMH56_RS28785 (LMH56_28785) 135586..136257 - 672 WP_015345000.1 plasmid partitioning/stability family protein -
LMH56_RS28790 (LMH56_28790) 136260..137231 - 972 WP_001568038.1 plasmid segregation protein ParM -
LMH56_RS28795 (LMH56_28795) 137480..138967 - 1488 WP_004178082.1 group II intron reverse transcriptase/maturase -
LMH56_RS28800 (LMH56_28800) 139374..139805 + 432 WP_001568036.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
LMH56_RS28805 (LMH56_28805) 139805..141076 + 1272 WP_004197646.1 Y-family DNA polymerase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance