MGE detailed information
MGE type: Conjugative plasmid MGE length: 99753 bp
Accession: NZ_CP087632 Location: 1..99753 Organism: Klebsiella pneumoniae subsp. pneumoniae strain DD02341 Replicon: plasmid pDD02341-3
Accession: NZ_CP087632 Location: 1..99753 Organism: Klebsiella pneumoniae subsp. pneumoniae strain DD02341 Replicon: plasmid pDD02341-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH53_RS28775 (46) | 46..1077 | + | 1032 | WP_000907866.1 | plasmid replication initiator RepA | - |
| LMH53_RS28780 (1775) | 1775..1990 | + | 216 | WP_000841013.1 | hypothetical protein | - |
| LMH53_RS28785 (1987) | 1987..2979 | + | 993 | WP_001579760.1 | hypothetical protein | - |
| LMH53_RS28790 (3038) | 3038..3655 | - | 618 | WP_000521604.1 | ProQ/FINO family protein | - |
| LMH53_RS28795 (3850) | 3850..5406 | - | 1557 | WP_001579759.1 | AAA family ATPase | - |
| LMH53_RS28800 (5671) | 5671..6261 | - | 591 | WP_000194568.1 | hypothetical protein | - |
| LMH53_RS28805 (6261) | 6261..6518 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| LMH53_RS28810 (6847) | 6847..7950 | + | 1104 | WP_001127573.1 | nucleotide-binding protein | - |
| LMH53_RS28815 (7980) | 7980..9110 | + | 1131 | WP_000542417.1 | DUF4238 domain-containing protein | - |
| LMH53_RS28820 (9110) | 9110..9400 | + | 291 | WP_001229373.1 | hypothetical protein | - |
| LMH53_RS28825 (9397) | 9397..9594 | - | 198 | WP_000215655.1 | hypothetical protein | - |
| LMH53_RS28830 (9919) | 9919..11052 | + | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| LMH53_RS28835 (11072) | 11072..11356 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| LMH53_RS28840 (11527) | 11527..12174 | - | 648 | WP_000074712.1 | hypothetical protein | - |
| LMH53_RS28845 (12162) | 12162..12497 | - | 336 | WP_000628093.1 | hypothetical protein | - |
| LMH53_RS28850 (12677) | 12677..13258 | - | 582 | WP_000139427.1 | hypothetical protein | - |
| LMH53_RS28855 (13828) | 13828..14178 | + | 351 | WP_000493380.1 | hypothetical protein | - |
| LMH53_RS28860 (14399) | 14399..15103 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LMH53_RS28865 (15339) | 15339..15623 | - | 285 | WP_170932188.1 | hypothetical protein | - |
| LMH53_RS28870 (15694) | 15694..16398 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LMH53_RS28875 (16939) | 16939..17496 | - | 558 | WP_024266330.1 | hypothetical protein | - |
| LMH53_RS28880 (17493) | 17493..18080 | - | 588 | WP_004187392.1 | restriction endonuclease | - |
| LMH53_RS28885 (18073) | 18073..18321 | - | 249 | WP_004187394.1 | helix-turn-helix transcriptional regulator | - |
| LMH53_RS28890 (18318) | 18318..18779 | - | 462 | WP_004187397.1 | hypothetical protein | - |
| LMH53_RS28895 (18920) | 18920..19396 | + | 477 | WP_024266329.1 | hypothetical protein | - |
| LMH53_RS28900 (19433) | 19433..20137 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LMH53_RS28905 (20160) | 20160..20291 | + | 132 | Protein_26 | hypothetical protein | - |
| LMH53_RS28910 (20429) | 20429..20704 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| LMH53_RS28915 (20698) | 20698..21342 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| LMH53_RS28920 (21571) | 21571..22542 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| LMH53_RS28925 (22547) | 22547..22939 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| LMH53_RS28930 (22944) | 22944..24215 | - | 1272 | WP_000457523.1 | Y-family DNA polymerase | - |
| LMH53_RS28935 (24215) | 24215..24652 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LMH53_RS28940 (24649) | 24649..24897 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| LMH53_RS28945 (25315) | 25315..26217 | + | 903 | WP_072748701.1 | DUF1281 domain-containing protein | - |
| LMH53_RS28950 (26214) | 26214..26525 | + | 312 | WP_032072582.1 | hypothetical protein | - |
| LMH53_RS28955 (26602) | 26602..27285 | + | 684 | WP_000086147.1 | DNA methylase | - |
| LMH53_RS28960 (27286) | 27286..27507 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| LMH53_RS28965 (27521) | 27521..27955 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| LMH53_RS28970 (28001) | 28001..28777 | + | 777 | WP_001005023.1 | hypothetical protein | - |
| LMH53_RS28975 (29189) | 29189..29614 | + | 426 | WP_001579750.1 | antirestriction protein | - |
| LMH53_RS28980 (29661) | 29661..30083 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| LMH53_RS28985 (30080) | 30080..30271 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| LMH53_RS28990 (30585) | 30585..32252 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| LMH53_RS28995 (33419) | 33419..33946 | + | 528 | WP_001276107.1 | single-stranded DNA-binding protein | - |
| LMH53_RS29000 (34004) | 34004..34237 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| LMH53_RS29005 (34296) | 34296..36254 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| LMH53_RS29010 (36309) | 36309..36743 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| LMH53_RS29015 (36740) | 36740..37459 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| LMH53_RS29020 (37456) | 37456..38052 | + | 597 | Protein_49 | hypothetical protein | - |
| LMH53_RS29025 (38514) | 38514..39014 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| LMH53_RS29030 (39743) | 39743..40177 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| LMH53_RS29035 (40271) | 40271..40537 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| LMH53_RS29040 (40602) | 40602..41528 | + | 927 | WP_000038402.1 | Recombination-promoting nuclease RpnA | VF |
| LMH53_RS29045 (41551) | 41551..41748 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| LMH53_RS29050 (41779) | 41779..42030 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| LMH53_RS29055 (42610) | 42610..43458 | + | 849 | WP_094819162.1 | DUF4942 domain-containing protein | - |
| LMH53_RS29060 (43544) | 43544..43879 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| LMH53_RS29065 (44113) | 44113..44445 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| LMH53_RS29070 (44456) | 44456..47155 | + | 2700 | WP_001405892.1 | Protein TraI | Relaxase |
| LMH53_RS29075 (47192) | 47192..49483 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| LMH53_RS29080 (49476) | 49476..50546 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| LMH53_RS29085 (50565) | 50565..51773 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (51953) | 51953..52013 | - | 61 | NuclAT_1 | - | - |
| - (51953) | 51953..52013 | - | 61 | NuclAT_1 | - | - |
| - (51953) | 51953..52013 | - | 61 | NuclAT_1 | - | - |
| - (51953) | 51953..52013 | - | 61 | NuclAT_1 | - | - |
| LMH53_RS29090 (52080) | 52080..52859 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (53374) | 53374..53436 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (53374) | 53374..53436 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (53374) | 53374..53436 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (53374) | 53374..53436 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| LMH53_RS29095 (53486) | 53486..53638 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| LMH53_RS29100 (53710) | 53710..53961 | - | 252 | WP_001291968.1 | hypothetical protein | - |
| - (54348) | 54348..54399 | - | 52 | NuclAT_2 | - | - |
| - (54348) | 54348..54399 | - | 52 | NuclAT_2 | - | - |
| - (54348) | 54348..54399 | - | 52 | NuclAT_2 | - | - |
| - (54348) | 54348..54399 | - | 52 | NuclAT_2 | - | - |
| LMH53_RS29105 (54885) | 54885..55061 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| LMH53_RS29110 (55270) | 55270..55479 | - | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| LMH53_RS29115 (55577) | 55577..56191 | - | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LMH53_RS29120 (56267) | 56267..58435 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| LMH53_RS29125 (58532) | 58532..59116 | - | 585 | WP_001579774.1 | IncI1-type conjugal transfer protein TraX | - |
| LMH53_RS29130 (59145) | 59145..60347 | - | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| LMH53_RS29135 (60314) | 60314..60928 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| LMH53_RS29140 (60928) | 60928..63972 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| LMH53_RS29145 (64062) | 64062..64862 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| LMH53_RS29150 (64846) | 64846..65034 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| LMH53_RS29155 (65098) | 65098..65502 | - | 405 | WP_001579770.1 | hypothetical protein | - |
| LMH53_RS29160 (65553) | 65553..66080 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| LMH53_RS29165 (66080) | 66080..66784 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| LMH53_RS29170 (66784) | 66784..68073 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| LMH53_RS29175 (68076) | 68076..69059 | - | 984 | WP_001579769.1 | hypothetical protein | VF |
| LMH53_RS29180 (69070) | 69070..69762 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| LMH53_RS29185 (69759) | 69759..70106 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| LMH53_RS29190 (70124) | 70124..73891 | - | 3768 | WP_001579768.1 | DUF5710 domain-containing protein | - |
| LMH53_RS29195 (73981) | 73981..74532 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| LMH53_RS29200 (74547) | 74547..74837 | - | 291 | WP_001372180.1 | hypothetical protein | - |
| LMH53_RS29205 (74834) | 74834..75982 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| LMH53_RS29210 (75979) | 75979..76797 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| LMH53_RS29215 (76794) | 76794..77252 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| LMH53_RS29220 (77647) | 77647..78231 | - | 585 | WP_001579766.1 | histidine phosphatase family protein | - |
| LMH53_RS29225 (78291) | 78291..79493 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| LMH53_RS29230 (79579) | 79579..80403 | - | 825 | WP_001238929.1 | conjugal transfer protein TraE | - |
| LMH53_RS29235 (80554) | 80554..81708 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| LMH53_RS29240 (83474) | 83474..84766 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| LMH53_RS29245 (84766) | 84766..85422 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| LMH53_RS29250 (85407) | 85407..85967 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| LMH53_RS29255 (85977) | 85977..86591 | - | 615 | WP_094819134.1 | hypothetical protein | VF |
| LMH53_RS29260 (86609) | 86609..87706 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| LMH53_RS29265 (87719) | 87719..89272 | - | 1554 | WP_001579763.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| LMH53_RS29270 (89283) | 89283..89735 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| LMH53_RS29275 (89722) | 89722..91017 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| LMH53_RS29280 (91010) | 91010..92692 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| LMH53_RS29285 (92706) | 92706..93143 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| LMH53_RS29290 (93143) | 93143..94210 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| LMH53_RS29295 (94834) | 94834..95130 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| LMH53_RS29300 (95306) | 95306..95560 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| LMH53_RS29305 (95722) | 95722..96273 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| LMH53_RS29310 (96446) | 96446..97129 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| LMH53_RS29315 (97383) | 97383..97916 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| LMH53_RS29320 (98358) | 98358..98645 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| LMH53_RS29325 (98683) | 98683..98841 | - | 159 | Protein_110 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|