MGE detailed information
MGE type: Prophage MGE length: 23880 bp
Accession: NZ_CP087564 Location: 736037..759916 Organism: Escherichia coli strain CM2010-0578/1 Replicon: chromosome
Accession: NZ_CP087564 Location: 736037..759916 Organism: Escherichia coli strain CM2010-0578/1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOF66_RS03675 (731631) | 731631..731834 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| LOF66_RS03680 (731869) | 731869..733329 | - | 1461 | WP_274480414.1 | mannitol dehydrogenase family protein | - |
| LOF66_RS03685 (733418) | 733418..734701 | - | 1284 | Protein_727 | MHS family MFS transporter YdfJ | - |
| LOF66_RS03690 (735305) | 735305..735418 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| LOF66_RS03695 (735487) | 735487..735720 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| LOF66_RS03700 (736037) | 736037..736627 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| LOF66_RS03705 (736725) | 736725..737300 | - | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| LOF66_RS03710 (737300) | 737300..737512 | - | 213 | Protein_732 | hypothetical protein | - |
| LOF66_RS03715 (737599) | 737599..737901 | - | 303 | Protein_733 | hypothetical protein | - |
| LOF66_RS03720 (737859) | 737859..738405 | - | 547 | Protein_734 | DNA-packaging protein | - |
| LOF66_RS03725 (738794) | 738794..739027 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| LOF66_RS03730 (739085) | 739085..739499 | + | 415 | Protein_736 | DUF1398 domain-containing protein | - |
| LOF66_RS03735 (739651) | 739651..739824 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| LOF66_RS03740 (739996) | 739996..740226 | - | 231 | WP_000720962.1 | protein YnfN | - |
| LOF66_RS03745 (740231) | 740231..740296 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| LOF66_RS03750 (740299) | 740299..740487 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| LOF66_RS03755 (740498) | 740498..740710 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| LOF66_RS03760 (741073) | 741073..741570 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| LOF66_RS03765 (741567) | 741567..742100 | - | 534 | WP_001092971.1 | lysozyme | - |
| LOF66_RS03770 (742097) | 742097..742408 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| LOF66_RS03775 (742413) | 742413..742628 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| LOF66_RS03780 (742848) | 742848..743018 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| LOF66_RS03785 (743382) | 743382..743597 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| LOF66_RS03790 (743898) | 743898..744110 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| LOF66_RS03795 (744165) | 744165..744254 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| LOF66_RS03800 (744532) | 744532..744855 | - | 324 | Protein_750 | antitermination protein | - |
| LOF66_RS03805 (744884) | 744884..745162 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| LOF66_RS03810 (745229) | 745229..745480 | - | 252 | WP_000980994.1 | protein Rem | - |
| LOF66_RS03815 (745697) | 745697..745852 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| LOF66_RS03820 (745924) | 745924..746211 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| LOF66_RS03825 (746211) | 746211..746450 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| LOF66_RS03830 (746475) | 746475..746780 | + | 306 | WP_001326990.1 | protein YdfV | - |
| LOF66_RS03835 (746983) | 746983..747315 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| LOF66_RS03840 (747752) | 747752..747901 | - | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| LOF66_RS03845 (748022) | 748022..749044 | - | 1023 | Protein_759 | ISNCY family transposase ISCARN112 | Transposase |
| LOF66_RS03850 (749834) | 749834..750121 | - | 288 | Protein_760 | hypothetical protein | - |
| LOF66_RS03855 (750599) | 750599..751088 | - | 490 | Protein_761 | class I SAM-dependent methyltransferase | - |
| LOF66_RS03860 (751085) | 751085..751336 | - | 252 | Protein_762 | DUF977 family protein | - |
| LOF66_RS03865 (751326) | 751326..751706 | + | 381 | Protein_763 | hypothetical protein | - |
| LOF66_RS03870 (751749) | 751749..752645 | - | 897 | Protein_764 | IS3 family transposase ISSd1 | Transposase |
| LOF66_RS03875 (752652) | 752652..753803 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| LOF66_RS03880 (753800) | 753800..753886 | - | 87 | Protein_766 | IS3 family transposase ISSfl10 | Transposase |
| LOF66_RS03885 (753868) | 753868..754128 | - | 261 | Protein_767 | IS3 family transposase ISSfl10 | Transposase |
| LOF66_RS03890 (754191) | 754191..755798 | + | 1608 | Protein_768 | 3'-5' exoribonuclease | - |
| LOF66_RS03895 (755871) | 755871..756122 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| LOF66_RS03900 (756157) | 756157..757483 | + | 1327 | Protein_770 | Tyrosine recombinase XerD ; Integrase | Integrase |
| LOF66_RS03905 (757671) | 757671..758690 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| LOF66_RS03910 (758702) | 758702..759916 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| LOF66_RS03915 (760122) | 760122..760448 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| LOF66_RS03920 (760583) | 760583..760924 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| LOF66_RS03925 (760959) | 760959..761519 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| LOF66_RS03930 (761522) | 761522..762232 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| LOF66_RS03935 (762340) | 762340..762645 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|