MGE detailed information
MGE type: IS/Tn MGE length: 1209 bp
Accession: NZ_CP087392 Location: 3673598..3674806 Organism: Pectobacterium parvum strain FN20211 Replicon: chromosome
Accession: NZ_CP087392 Location: 3673598..3674806 Organism: Pectobacterium parvum strain FN20211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOZ86_RS16445 (LOZ86_16445) | 3668711..3668953 | + | 243 | WP_230242359.1 | DUF2732 family protein | - |
| LOZ86_RS16450 (LOZ86_16450) | 3668953..3669261 | + | 309 | WP_230242372.1 | DUF5405 family protein | - |
| LOZ86_RS16455 (LOZ86_16455) | 3669261..3669485 | + | 225 | WP_230243169.1 | TraR/DksA family transcriptional regulator | - |
| LOZ86_RS16460 (LOZ86_16460) | 3669673..3671976 | + | 2304 | WP_230242374.1 | replication endonuclease | - |
| LOZ86_RS16465 (LOZ86_16465) | 3671973..3672281 | + | 309 | WP_230242376.1 | hypothetical protein | - |
| LOZ86_RS16470 (LOZ86_16470) | 3672281..3672481 | + | 201 | WP_230242378.1 | hypothetical protein | - |
| LOZ86_RS16475 (LOZ86_16475) | 3673199..3673414 | + | 216 | WP_230242379.1 | hypothetical protein | - |
| LOZ86_RS16480 (LOZ86_16480) | 3673598..3674806 | - | 1209 | WP_230242335.1 | IS256 family transposase ISEc39 | Transposase |
| LOZ86_RS16485 (LOZ86_16485) | 3674892..3675605 | + | 714 | WP_230242381.1 | hypothetical protein | - |
| LOZ86_RS16490 (LOZ86_16490) | 3675911..3676204 | - | 294 | WP_230242397.1 | Arc family DNA-binding protein | - |
| LOZ86_RS16495 (LOZ86_16495) | 3676501..3677178 | + | 678 | WP_230242399.1 | ORF6N domain-containing protein | - |
| LOZ86_RS16500 (LOZ86_16500) | 3677265..3677519 | + | 255 | WP_116238280.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LOZ86_RS16505 (LOZ86_16505) | 3677516..3677857 | + | 342 | WP_039288288.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LOZ86_RS16510 (LOZ86_16510) | 3677890..3678909 | - | 1020 | WP_230242401.1 | phage portal protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|