MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 46788 bp
Accession: NZ_CP087392 Location: 1827050..1873837 Organism: Pectobacterium parvum strain FN20211 Replicon: chromosome
Accession: NZ_CP087392 Location: 1827050..1873837 Organism: Pectobacterium parvum strain FN20211 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOZ86_RS08140 (LOZ86_08140) | 1822209..1825298 | + | 3090 | WP_039484159.1 | efflux RND transporter permease subunit | - |
| LOZ86_RS08145 (LOZ86_08145) | 1825414..1825671 | + | 258 | Protein_1568 | MFS transporter | - |
| LOZ86_RS08150 (LOZ86_08150) | 1825739..1826814 | + | 1076 | Protein_1569 | IS3 family transposase | - |
| LOZ86_RS08155 (LOZ86_08155) | 1827256..1827473 | - | 218 | Protein_1570 | transposase | - |
| LOZ86_RS08165 (LOZ86_08165) | 1827572..1827817 | + | 246 | Protein_1571 | IS5/IS1182 family transposase | - |
| LOZ86_RS08170 (LOZ86_08170) | 1828161..1829222 | + | 1062 | WP_161547091.1 | GNAT family N-acetyltransferase | - |
| LOZ86_RS08175 (LOZ86_08175) | 1829233..1830399 | + | 1167 | WP_039513688.1 | pyridoxal phosphate-dependent aminotransferase family protein | - |
| LOZ86_RS08180 (LOZ86_08180) | 1830416..1831156 | + | 741 | WP_156890175.1 | hypothetical protein | - |
| LOZ86_RS08185 (LOZ86_08185) | 1831153..1831710 | + | 558 | WP_039513692.1 | histidine phosphatase family protein | - |
| LOZ86_RS08190 (LOZ86_08190) | 1831707..1832600 | + | 894 | WP_039513693.1 | NAD-dependent epimerase/dehydratase family protein | - |
| LOZ86_RS08195 (LOZ86_08195) | 1832597..1833205 | + | 609 | WP_039513694.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| LOZ86_RS08200 (LOZ86_08200) | 1833220..1833486 | + | 267 | WP_039513695.1 | hypothetical protein | VF |
| LOZ86_RS08205 (LOZ86_08205) | 1833483..1834706 | + | 1224 | WP_039513697.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| LOZ86_RS08210 (LOZ86_08210) | 1834699..1835649 | + | 951 | WP_039513699.1 | hypothetical protein | - |
| LOZ86_RS08215 (LOZ86_08215) | 1835646..1835999 | + | 354 | WP_039513700.1 | hypothetical protein | - |
| LOZ86_RS08220 (LOZ86_08220) | 1835989..1836444 | + | 456 | WP_052237787.1 | hypothetical protein | - |
| LOZ86_RS08225 (LOZ86_08225) | 1836460..1837206 | + | 747 | WP_039513702.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| LOZ86_RS08230 (LOZ86_08230) | 1837348..1838517 | + | 1170 | WP_230243059.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | VF |
| LOZ86_RS08235 (LOZ86_08235) | 1838514..1841603 | + | 3090 | WP_052237789.1 | efflux RND transporter permease subunit | - |
| LOZ86_RS08240 (LOZ86_08240) | 1841600..1844686 | + | 3087 | WP_052237790.1 | efflux RND transporter permease subunit | - |
| LOZ86_RS08245 (LOZ86_08245) | 1845311..1846255 | + | 945 | WP_039513709.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOZ86_RS08250 (LOZ86_08250) | 1846576..1846812 | + | 237 | WP_014699357.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| LOZ86_RS08255 (LOZ86_08255) | 1846815..1847129 | + | 315 | WP_039513711.1 | CcdB family protein | Toxin Detail |
| LOZ86_RS08260 (LOZ86_08260) | 1847163..1847915 | - | 753 | WP_039513714.1 | MobC family replication-relaxation protein | - |
| LOZ86_RS08265 (LOZ86_08265) | 1847924..1849660 | - | 1737 | WP_039513716.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LOZ86_RS08270 (LOZ86_08270) | 1850454..1850756 | - | 303 | WP_161547089.1 | conjugal transfer protein | - |
| LOZ86_RS08275 (LOZ86_08275) | 1850800..1851816 | - | 1017 | WP_039513719.1 | hypothetical protein | VF |
| LOZ86_RS08280 (LOZ86_08280) | 1851806..1853038 | - | 1233 | WP_230243061.1 | Glucose-1-phosphate adenylyltransferase | VF |
| LOZ86_RS08285 (LOZ86_08285) | 1853035..1853928 | - | 894 | WP_230243063.1 | P-type conjugative transfer protein VirB9 | - |
| LOZ86_RS08290 (LOZ86_08290) | 1853925..1854608 | - | 684 | WP_230243065.1 | hypothetical protein | VF |
| LOZ86_RS08295 (LOZ86_08295) | 1854601..1854741 | - | 141 | WP_181892575.1 | hypothetical protein | - |
| LOZ86_RS08300 (LOZ86_08300) | 1854829..1855869 | - | 1041 | WP_039513725.1 | type IV secretion system protein | - |
| LOZ86_RS08305 (LOZ86_08305) | 1855881..1856105 | - | 225 | WP_039513726.1 | EexN family lipoprotein | - |
| LOZ86_RS08310 (LOZ86_08310) | 1856116..1856832 | - | 717 | WP_039513729.1 | type IV secretion system protein | - |
| LOZ86_RS08315 (LOZ86_08315) | 1856856..1859603 | - | 2748 | WP_230243067.1 | hypothetical protein | VF |
| LOZ86_RS08320 (LOZ86_08320) | 1859613..1859894 | - | 282 | WP_107332632.1 | TrbC/VirB2 family protein | - |
| LOZ86_RS08325 (LOZ86_08325) | 1859891..1860556 | - | 666 | WP_039513734.1 | hypothetical protein | VF |
| LOZ86_RS08330 (LOZ86_08330) | 1860636..1860857 | - | 222 | WP_039513735.1 | hypothetical protein | - |
| LOZ86_RS08335 (LOZ86_08335) | 1862795..1863475 | + | 681 | WP_052237791.1 | guanitoxin biosynthesis heme-dependent pre-guanitoxin N-hydroxylase GntA | - |
| LOZ86_RS08340 (LOZ86_08340) | 1863497..1864252 | + | 756 | WP_039513738.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| LOZ86_RS08345 (LOZ86_08345) | 1864249..1865280 | + | 1032 | WP_039513740.1 | hypothetical protein | - |
| LOZ86_RS08350 (LOZ86_08350) | 1865314..1865985 | + | 672 | WP_039513742.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| LOZ86_RS08355 (LOZ86_08355) | 1865988..1866632 | + | 645 | WP_039513744.1 | LysE family translocator | - |
| LOZ86_RS08360 (LOZ86_08360) | 1866634..1867326 | + | 693 | WP_039513747.1 | phenylalanine--tRNA ligase beta subunit-related protein | - |
| LOZ86_RS08365 (LOZ86_08365) | 1867323..1868081 | + | 759 | WP_039513750.1 | MOSC domain-containing protein | - |
| LOZ86_RS08370 (LOZ86_08370) | 1868548..1868757 | - | 210 | WP_039513753.1 | TraR/DksA family transcriptional regulator | - |
| LOZ86_RS08375 (LOZ86_08375) | 1868747..1869331 | - | 585 | WP_039513756.1 | DUF2857 domain-containing protein | - |
| LOZ86_RS08380 (LOZ86_08380) | 1869348..1869542 | - | 195 | WP_024108950.1 | AlpA family transcriptional regulator | - |
| LOZ86_RS08385 (LOZ86_08385) | 1869696..1870610 | - | 915 | WP_230243069.1 | hypothetical protein | - |
| LOZ86_RS08390 (LOZ86_08390) | 1871025..1871297 | - | 273 | WP_014699383.1 | helix-turn-helix transcriptional regulator | - |
| LOZ86_RS08395 (LOZ86_08395) | 1871444..1871758 | + | 315 | WP_039513758.1 | helix-turn-helix transcriptional regulator | - |
| LOZ86_RS08400 (LOZ86_08400) | 1871943..1872257 | + | 315 | WP_025918867.1 | helix-turn-helix transcriptional regulator | - |
| LOZ86_RS08405 (LOZ86_08405) | 1872389..1873660 | - | 1272 | WP_230243070.1 | HTH-type transcriptional regulator HdfR ; Integrase | Integrase |
| LOZ86_RS08415 (LOZ86_08415) | 1874008..1874805 | - | 798 | WP_039480098.1 | DgsA anti-repressor MtfA | - |
| LOZ86_RS08425 (LOZ86_08425) | 1876085..1876483 | - | 399 | WP_039480102.1 | H-NS family nucleoid-associated regulatory protein | - |
| LOZ86_RS08430 (LOZ86_08430) | 1877010..1877177 | + | 168 | WP_039480104.1 | YqaE/Pmp3 family membrane protein | - |
| LOZ86_RS08435 (LOZ86_08435) | 1877259..1878734 | - | 1476 | WP_230243155.1 | sensor domain-containing diguanylate cyclase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|