MGE detailed information
MGE type: Prophage MGE length: 60239 bp
Accession: NZ_CP087290 Location: 2692279..2752517 Organism: Escherichia coli strain APEC 102026 Replicon: chromosome
Accession: NZ_CP087290 Location: 2692279..2752517 Organism: Escherichia coli strain APEC 102026 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LO741_RS12955 (2687670) | 2687670..2688167 | + | 498 | WP_000019227.1 | chorismate lyase | - |
| LO741_RS12960 (2688180) | 2688180..2689052 | + | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| LO741_RS12965 (2689207) | 2689207..2691630 | - | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| LO741_RS12970 (2691801) | 2691801..2692169 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| LO741_RS12975 (2692279) | 2692279..2692887 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| LO741_RS12980 (2692960) | 2692960..2694285 | + | 1326 | WP_001318177.1 | MATE family efflux transporter DinF | - |
| LO741_RS12985 (2694401) | 2694401..2694610 | + | 210 | WP_001296638.1 | CsbD family protein | - |
| LO741_RS12990 (2694652) | 2694652..2695167 | - | 516 | WP_000416264.1 | zinc uptake transcriptional repressor Zur | - |
| LO741_RS12995 (2695702) | 2695702..2696211 | + | 510 | WP_024174200.1 | Panacea domain-containing protein | Antitoxin Detail |
| LO741_RS13000 (2696241) | 2696241..2696627 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| LO741_RS13005 (2696667) | 2696667..2696840 | + | 174 | WP_165386319.1 | hypothetical protein | - |
| LO741_RS13010 (2696888) | 2696888..2697169 | - | 282 | WP_039023331.1 | pyocin activator PrtN family protein | - |
| LO741_RS13015 (2697206) | 2697206..2697778 | - | 573 | WP_052970437.1 | 3'-5' exonuclease | - |
| LO741_RS13020 (2697778) | 2697778..2697939 | - | 162 | WP_230989213.1 | DUF551 domain-containing protein | - |
| LO741_RS13025 (2698171) | 2698171..2698296 | - | 126 | Protein_2532 | hypothetical protein | - |
| LO741_RS13030 (2698299) | 2698299..2698490 | - | 192 | WP_052970435.1 | hypothetical protein | - |
| LO741_RS13035 (2698492) | 2698492..2699214 | - | 723 | WP_052970434.1 | ead/Ea22-like family protein | - |
| LO741_RS13040 (2699211) | 2699211..2699450 | - | 240 | WP_000476211.1 | hypothetical protein | - |
| LO741_RS13045 (2699443) | 2699443..2699646 | - | 204 | WP_000111289.1 | hypothetical protein | - |
| LO741_RS13050 (2699643) | 2699643..2700005 | - | 363 | WP_001242718.1 | phage protein | - |
| LO741_RS13055 (2699996) | 2699996..2700532 | - | 537 | WP_001401560.1 | 5'-deoxynucleotidase | - |
| LO741_RS13060 (2700660) | 2700660..2701484 | - | 825 | WP_052970433.1 | DUF2303 family protein | - |
| LO741_RS13065 (2701550) | 2701550..2701912 | - | 363 | WP_000135680.1 | protein YfdP | - |
| LO741_RS13070 (2702613) | 2702613..2703305 | - | 693 | WP_001345148.1 | helix-turn-helix transcriptional regulator | - |
| LO741_RS13075 (2703403) | 2703403..2703663 | + | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| LO741_RS13080 (2703656) | 2703656..2704207 | + | 552 | WP_052970432.1 | protein YmfL | - |
| LO741_RS13085 (2704353) | 2704353..2704532 | + | 180 | WP_001341559.1 | DUF4222 domain-containing protein | - |
| LO741_RS13090 (2704462) | 2704462..2705352 | + | 891 | WP_224446590.1 | Rha family phage regulatory protein | - |
| LO741_RS13095 (2705349) | 2705349..2705573 | + | 225 | WP_000620696.1 | hypothetical protein | - |
| LO741_RS13100 (2705570) | 2705570..2706388 | + | 819 | WP_000061529.1 | helix-turn-helix domain-containing protein | - |
| LO741_RS13105 (2706385) | 2706385..2706879 | + | 495 | WP_072110351.1 | PerC family transcriptional regulator | - |
| LO741_RS13110 (2706879) | 2706879..2707532 | + | 654 | WP_001522181.1 | phage N-6-adenine-methyltransferase | - |
| LO741_RS13115 (2707529) | 2707529..2707855 | + | 327 | WP_000210144.1 | LexA repressor | - |
| LO741_RS13120 (2707852) | 2707852..2708268 | + | 417 | WP_052970431.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LO741_RS13125 (2708261) | 2708261..2709070 | + | 810 | WP_001061445.1 | KilA-N domain-containing protein | - |
| LO741_RS13130 (2709078) | 2709078..2710067 | + | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| LO741_RS13135 (2710085) | 2710085..2710450 | + | 366 | WP_001204819.1 | antiterminator Q family protein | - |
| LO741_RS13140 (2710535) | 2710535..2710981 | - | 447 | WP_001038608.1 | hypothetical protein | - |
| LO741_RS13145 (2711252) | 2711252..2711455 | + | 204 | WP_000917724.1 | hypothetical protein | - |
| LO741_RS13150 (2711606) | 2711606..2712658 | + | 1053 | WP_000799656.1 | site-specific DNA-methyltransferase | - |
| LO741_RS13155 (2712725) | 2712725..2712940 | + | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| LO741_RS13160 (2712940) | 2712940..2713437 | + | 498 | WP_000075159.1 | lysozyme RrrD | - |
| LO741_RS13165 (2713654) | 2713654..2713839 | + | 186 | WP_123058507.1 | Rz1 family lipoprotein | - |
| LO741_RS13170 (2713923) | 2713923..2714285 | + | 363 | WP_000232224.1 | hypothetical protein | - |
| LO741_RS13175 (2714749) | 2714749..2715285 | + | 537 | WP_047649230.1 | DUF1441 family protein | - |
| LO741_RS13180 (2715285) | 2715285..2717384 | + | 2100 | WP_052940525.1 | phage terminase large subunit family protein | - |
| LO741_RS13185 (2717381) | 2717381..2717593 | + | 213 | WP_001072975.1 | hypothetical protein | - |
| LO741_RS13190 (2717593) | 2717593..2719068 | + | 1476 | WP_001460789.1 | phage portal protein | - |
| LO741_RS13195 (2719046) | 2719046..2721073 | + | 2028 | WP_086258542.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| LO741_RS13200 (2721160) | 2721160..2721483 | + | 324 | WP_001097045.1 | DUF2190 family protein | - |
| LO741_RS13205 (2721476) | 2721476..2721751 | + | 276 | WP_052940527.1 | DNA breaking-rejoining protein | - |
| LO741_RS13210 (2721763) | 2721763..2722353 | + | 591 | WP_052970428.1 | phage tail protein | - |
| LO741_RS13215 (2722350) | 2722350..2722751 | + | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| LO741_RS13220 (2722763) | 2722763..2723506 | + | 744 | WP_000211109.1 | phage tail protein | - |
| LO741_RS13225 (2723567) | 2723567..2723953 | + | 387 | WP_001297778.1 | phage minor tail protein G | - |
| LO741_RS13230 (2723962) | 2723962..2724291 | + | 330 | WP_052970427.1 | phage tail assembly protein T | - |
| LO741_RS13235 (2724263) | 2724263..2727319 | + | 3057 | WP_052970426.1 | phage tail tape measure protein | - |
| LO741_RS13240 (2727319) | 2727319..2727648 | + | 330 | WP_000447253.1 | phage tail protein | - |
| LO741_RS13245 (2727658) | 2727658..2728356 | + | 699 | WP_052979527.1 | phage minor tail protein L | - |
| LO741_RS13250 (2728362) | 2728362..2729105 | + | 744 | WP_173002640.1 | C40 family peptidase | - |
| LO741_RS13255 (2729102) | 2729102..2729650 | + | 549 | WP_112016285.1 | tail assembly protein | - |
| LO741_RS13260 (2729711) | 2729711..2733106 | + | 3396 | WP_112016284.1 | host specificity protein J | - |
| LO741_RS13265 (2733174) | 2733174..2733773 | + | 600 | WP_112016283.1 | hypothetical protein | VF |
| LO741_RS13270 (2733838) | 2733838..2737308 | + | 3471 | WP_112026871.1 | prophage tail fiber N-terminal domain-containing protein | - |
| LO741_RS13275 (2737308) | 2737308..2737892 | + | 585 | WP_053003902.1 | tail fiber assembly protein | - |
| LO741_RS13280 (2738008) | 2738008..2738256 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| LO741_RS13285 (2738318) | 2738318..2739415 | - | 1098 | WP_021557428.1 | hypothetical protein ; Integrase | Integrase |
| LO741_RS13290 (2739504) | 2739504..2740541 | + | 1038 | WP_187183328.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| LO741_RS13295 (2740675) | 2740675..2740917 | + | 243 | WP_000891406.1 | envelope stress response protein PspG | - |
| LO741_RS13300 (2741083) | 2741083..2742066 | - | 984 | WP_000235522.1 | hypothetical protein | VF |
| LO741_RS13305 (2742149) | 2742149..2743564 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| LO741_RS13310 (2743617) | 2743617..2744696 | + | 1080 | WP_001147328.1 | alanine racemase | - |
| LO741_RS13315 (2744949) | 2744949..2746142 | + | 1194 | WP_001696415.1 | aromatic amino acid transaminase | - |
| LO741_RS13320 (2746364) | 2746364..2746615 | - | 252 | WP_224471525.1 | hypothetical protein | - |
| LO741_RS13325 (2746645) | 2746645..2746867 | - | 223 | Protein_2592 | hypothetical protein | - |
| LO741_RS13330 (2747269) | 2747269..2747982 | + | 714 | WP_001317548.1 | acid phosphatase AphA | - |
| LO741_RS13335 (2748093) | 2748093..2748509 | + | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| LO741_RS13340 (2748513) | 2748513..2748869 | + | 357 | WP_000155648.1 | MmcQ/YjbR family DNA-binding protein | - |
| LO741_RS13345 (2748904) | 2748904..2751726 | - | 2823 | WP_000357740.1 | excinuclease ABC subunit UvrA | - |
| LO741_RS13350 (2751981) | 2751981..2752517 | + | 537 | WP_000168305.1 | single-stranded DNA-binding protein SSB1 | - |
| LO741_RS13355 (2752616) | 2752616..2752897 | - | 282 | WP_001295689.1 | YjcB family protein | - |
| LO741_RS13360 (2753326) | 2753326..2754912 | + | 1587 | WP_000017978.1 | c-di-GMP phosphodiesterase PdeC | - |
| LO741_RS13365 (2754915) | 2754915..2755238 | - | 324 | WP_000019358.1 | superoxide response transcriptional regulator SoxS | - |
| LO741_RS13370 (2755324) | 2755324..2755788 | + | 465 | WP_000412424.1 | redox-sensitive transcriptional activator SoxR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|