MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 118098 bp
Accession: NZ_CP087290 Location: 1342030..1460127 Organism: Escherichia coli strain APEC 102026 Replicon: chromosome
Accession: NZ_CP087290 Location: 1342030..1460127 Organism: Escherichia coli strain APEC 102026 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LO741_RS06365 (1337577) | 1337577..1337774 | - | 198 | WP_001238008.1 | hypothetical protein | - |
| LO741_RS06370 (1337914) | 1337914..1338180 | - | 267 | WP_000766272.1 | YkgJ family cysteine cluster protein | - |
| LO741_RS06375 (1338177) | 1338177..1339748 | - | 1572 | WP_167777162.1 | coiled-coil domain-containing protein 22 | - |
| LO741_RS06380 (1339795) | 1339795..1340874 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| LO741_RS06385 (1340923) | 1340923..1341819 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| LO741_RS06390 (1342239) | 1342239..1342976 | - | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| LO741_RS06395 (1343206) | 1343206..1343384 | + | 179 | Protein_1246 | integrase | - |
| LO741_RS06400 (1343607) | 1343607..1343885 | - | 279 | WP_225882951.1 | hypothetical protein | - |
| LO741_RS06405 (1343939) | 1343939..1344286 | - | 348 | WP_244591806.1 | hypothetical protein | - |
| LO741_RS06410 (1344500) | 1344500..1344994 | - | 495 | WP_250189147.1 | hypothetical protein | - |
| LO741_RS06415 (1345063) | 1345063..1345368 | - | 306 | WP_274434843.1 | hypothetical protein | - |
| LO741_RS06420 (1345337) | 1345337..1345918 | - | 582 | WP_274434845.1 | hypothetical protein | - |
| LO741_RS06425 (1345893) | 1345893..1346123 | - | 231 | WP_274434847.1 | AAA family ATPase | - |
| LO741_RS06430 (1346132) | 1346132..1347274 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| LO741_RS06435 (1347271) | 1347271..1348905 | - | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| LO741_RS06440 (1348969) | 1348969..1352382 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| LO741_RS06445 (1352990) | 1352990..1353504 | + | 515 | Protein_1256 | ISL3 family transposase ISEc38 | Transposase |
| LO741_RS06450 (1353804) | 1353804..1354070 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| LO741_RS06455 (1354537) | 1354537..1355619 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| LO741_RS06460 (1355622) | 1355622..1356566 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| LO741_RS06465 (1356563) | 1356563..1357543 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| LO741_RS06470 (1357711) | 1357711..1358872 | + | 1162 | Protein_1261 | IS3 family transposase ISEc17 | Transposase |
| LO741_RS06475 (1359005) | 1359005..1359865 | - | 861 | Protein_1262 | VENN motif pre-toxin domain-containing protein | - |
| LO741_RS06480 (1360572) | 1360572..1361792 | + | 1221 | WP_000410951.1 | arginine deiminase | - |
| LO741_RS06485 (1361803) | 1361803..1362714 | + | 912 | WP_001564269.1 | carbamate kinase | - |
| LO741_RS06490 (1362799) | 1362799..1363803 | + | 1005 | WP_000154545.1 | Ornithine carbamoyltransferase | VF |
| LO741_RS06495 (1363851) | 1363851..1365254 | + | 1404 | WP_187183369.1 | YfcC family protein | - |
| LO741_RS06500 (1365335) | 1365335..1365814 | + | 480 | WP_024191448.1 | ArgR family transcriptional regulator | - |
| LO741_RS06505 (1365888) | 1365888..1366049 | + | 162 | WP_088459633.1 | pyrBI operon leader peptide | - |
| LO741_RS06510 (1366052) | 1366052..1366309 | + | 258 | WP_029402540.1 | hypothetical protein | - |
| LO741_RS06515 (1366461) | 1366461..1366820 | - | 360 | WP_029402539.1 | tRNA nuclease CdiA | VF |
| LO741_RS06520 (1366833) | 1366833..1368599 | - | 1767 | WP_029402537.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| LO741_RS06525 (1368963) | 1368963..1369196 | - | 234 | WP_029402536.1 | hypothetical protein | - |
| LO741_RS06530 (1369293) | 1369293..1369916 | - | 624 | WP_029402534.1 | hypothetical protein | - |
| LO741_RS06535 (1370005) | 1370005..1370517 | - | 513 | WP_058128118.1 | hypothetical protein | - |
| LO741_RS06540 (1370786) | 1370786..1371022 | - | 237 | WP_058128119.1 | AlpA family transcriptional regulator | - |
| LO741_RS06545 (1371091) | 1371091..1371663 | - | 573 | WP_058128120.1 | hypothetical protein | - |
| LO741_RS06550 (1371910) | 1371910..1372476 | - | 567 | WP_075326465.1 | inovirus-type Gp2 protein | - |
| LO741_RS06555 (1374041) | 1374041..1375645 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| LO741_RS06560 (1376079) | 1376079..1376285 | + | 207 | WP_025492114.1 | hypothetical protein | - |
| LO741_RS06565 (1376297) | 1376297..1376557 | - | 261 | WP_223362175.1 | hypothetical protein | - |
| LO741_RS06570 (1376581) | 1376581..1376736 | + | 156 | WP_020923993.1 | hypothetical protein | - |
| LO741_RS06575 (1376830) | 1376830..1377561 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| LO741_RS06580 (1379312) | 1379312..1380121 | + | 810 | WP_023155731.1 | hypothetical protein | - |
| LO741_RS06585 (1380118) | 1380118..1381050 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| LO741_RS06590 (1381157) | 1381157..1382041 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| LO741_RS06595 (1382160) | 1382160..1382837 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| LO741_RS06600 (1382867) | 1382867..1383076 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| LO741_RS06605 (1383167) | 1383167..1383985 | + | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| LO741_RS06610 (1384077) | 1384077..1384562 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| LO741_RS06615 (1384578) | 1384578..1385054 | + | 477 | WP_001186715.1 | RadC family protein | - |
| LO741_RS06620 (1385123) | 1385123..1385344 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| LO741_RS06625 (1385424) | 1385424..1385798 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| LO741_RS06630 (1385845) | 1385845..1386222 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| LO741_RS06635 (1386219) | 1386219..1386710 | + | 492 | WP_023155722.1 | DUF5983 family protein | - |
| LO741_RS06640 (1386722) | 1386722..1386919 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| LO741_RS06645 (1387004) | 1387004..1387870 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| LO741_RS06650 (1387942) | 1387942..1388205 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LO741_RS06655 (1388202) | 1388202..1388528 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LO741_RS06660 (1388992) | 1388992..1390254 | + | 1263 | WP_001218753.1 | Prophage integrase IntS ; Integrase | Integrase |
| LO741_RS06665 (1390706) | 1390706..1394221 | + | 3516 | WP_021572001.1 | AAA domain-containing protein | - |
| LO741_RS06670 (1394330) | 1394330..1395829 | - | 1500 | WP_001313263.1 | phosphoethanolamine transferase | - |
| LO741_RS06675 (1396011) | 1396011..1396751 | - | 741 | WP_000755103.1 | outer membrane beta-barrel protein | - |
| LO741_RS06680 (1397551) | 1397551..1397982 | - | 432 | Protein_1303 | iron ABC transporter permease | - |
| LO741_RS06685 (1398078) | 1398078..1400057 | - | 1980 | WP_000533458.1 | PhoX family phosphatase | - |
| LO741_RS06690 (1400784) | 1400784..1401084 | + | 301 | Protein_1305 | transposase | - |
| LO741_RS06695 (1401148) | 1401148..1401288 | + | 141 | WP_000598241.1 | IS3 family transposase ISKpn37 | Transposase |
| LO741_RS06700 (1401397) | 1401397..1401951 | + | 555 | WP_000409994.1 | IS3 family transposase ISKpn37 | Transposase |
| LO741_RS06705 (1401985) | 1401985..1403489 | - | 1505 | Protein_1308 | IS66 family transposase ISEc8 | Transposase |
| LO741_RS06710 (1403539) | 1403539..1403886 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| LO741_RS06715 (1403883) | 1403883..1404263 | - | 381 | WP_021572005.1 | IS66 family transposase ISEc8 | Transposase |
| LO741_RS06720 (1404428) | 1404428..1404598 | - | 171 | Protein_1311 | IS66 family transposase ISSfl3 | Transposase |
| LO741_RS06725 (1404843) | 1404843..1405634 | - | 792 | WP_000977396.1 | DUF4198 domain-containing protein | - |
| LO741_RS06730 (1405653) | 1405653..1407623 | - | 1971 | WP_001313270.1 | Hemin receptor | VF |
| LO741_RS06735 (1407790) | 1407790..1408448 | - | 659 | Protein_1314 | DDE-type integrase/transposase/recombinase | - |
| LO741_RS06740 (1408642) | 1408642..1409854 | - | 1213 | Protein_1315 | IS3 family transposase IS1203 | Transposase |
| LO741_RS06745 (1409910) | 1409910..1410145 | - | 236 | Protein_1316 | IS3 family transposase ISEcl1 | Transposase |
| LO741_RS06750 (1410923) | 1410923..1411078 | - | 156 | WP_232380132.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LO741_RS06755 (1411279) | 1411279..1412595 | + | 1317 | WP_000803220.1 | sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB | - |
| LO741_RS06760 (1412734) | 1412734..1413731 | + | 998 | Protein_1319 | IS110 family transposase | - |
| LO741_RS06765 (1414090) | 1414090..1415433 | + | 1344 | WP_000551919.1 | esterase-like activity of phytase family protein | - |
| LO741_RS06770 (1415590) | 1415590..1416414 | - | 825 | WP_001293448.1 | MurR/RpiR family transcriptional regulator | - |
| LO741_RS06775 (1416580) | 1416580..1418136 | + | 1557 | WP_000983423.1 | maltose/glucose-specific PTS transporter subunit IIC | - |
| LO741_RS06780 (1418136) | 1418136..1418825 | + | 690 | WP_000859647.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| LO741_RS06785 (1419381) | 1419381..1419668 | + | 288 | WP_094122411.1 | c-type lysozyme inhibitor | - |
| LO741_RS06790 (1420025) | 1420025..1420480 | - | 456 | WP_000884153.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| LO741_RS06795 (1420569) | 1420569..1421705 | + | 1137 | WP_114139578.1 | IS4 family transposase IS186B | Transposase |
| LO741_RS06800 (1421820) | 1421820..1422380 | + | 561 | Protein_1327 | IS21 family transposase ISEc12 | Transposase |
| LO741_RS06810 (1423682) | 1423682..1424674 | + | 993 | Protein_1329 | IS21 family transposase ISEc12 | Transposase |
| LO741_RS06815 (1424689) | 1424689..1425435 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| LO741_RS06820 (1425528) | 1425528..1425743 | + | 216 | Protein_1331 | IS4 family transposase IS186B | Transposase |
| LO741_RS06825 (1425790) | 1425790..1427055 | - | 1266 | WP_000919999.1 | YadA-like family protein | - |
| LO741_RS06830 (1427918) | 1427918..1428093 | - | 176 | Protein_1333 | transposase | - |
| LO741_RS06835 (1428282) | 1428282..1429235 | - | 954 | WP_274434888.1 | transketolase family protein | - |
| LO741_RS06840 (1429228) | 1429228..1430058 | - | 831 | WP_001101067.1 | transketolase | - |
| LO741_RS06845 (1430055) | 1430055..1431443 | - | 1389 | WP_000470229.1 | PTS ascorbate transporter subunit IIC | - |
| LO741_RS06850 (1431466) | 1431466..1431738 | - | 273 | WP_000699820.1 | PTS sugar transporter subunit IIB | - |
| LO741_RS06855 (1431817) | 1431817..1432260 | - | 444 | WP_001317566.1 | PTS sugar transporter subunit IIA | - |
| LO741_RS06860 (1432518) | 1432518..1433537 | + | 1020 | WP_001018808.1 | LacI family DNA-binding transcriptional regulator | - |
| LO741_RS06865 (1434103) | 1434103..1434582 | + | 480 | WP_021572006.1 | ProQ/FinO family protein | - |
| LO741_RS06870 (1434678) | 1434678..1434866 | + | 189 | WP_223718411.1 | hypothetical protein | - |
| LO741_RS06875 (1435427) | 1435427..1435663 | - | 237 | WP_000958152.1 | AlpA family transcriptional regulator | - |
| LO741_RS06880 (1435732) | 1435732..1436304 | - | 573 | WP_000991576.1 | hypothetical protein | - |
| LO741_RS06885 (1436562) | 1436562..1437128 | - | 567 | WP_001126822.1 | inovirus-type Gp2 protein | - |
| LO741_RS06890 (1438264) | 1438264..1439477 | - | 1214 | Protein_1345 | IS3 family transposase | - |
| LO741_RS06895 (1439515) | 1439515..1440679 | + | 1165 | Protein_1346 | IS256 family transposase ISSod4 | Transposase |
| LO741_RS06900 (1440859) | 1440859..1442907 | - | 2049 | WP_000792543.1 | TonB-dependent siderophore receptor IreA | - |
| LO741_RS06905 (1443100) | 1443100..1444328 | + | 1229 | WP_153275894.1 | IS3 family transposase IS2 | Transposase |
| LO741_RS06910 (1444439) | 1444439..1445170 | - | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| LO741_RS06915 (1445840) | 1445840..1446370 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| LO741_RS06920 (1447570) | 1447570..1448700 | - | 1131 | WP_021572008.1 | hypothetical protein | - |
| LO741_RS06925 (1448885) | 1448885..1449769 | + | 885 | WP_000010392.1 | 50S ribosome-binding GTPase | - |
| LO741_RS06930 (1449888) | 1449888..1450565 | + | 678 | WP_001097368.1 | hypothetical protein | - |
| LO741_RS06935 (1450571) | 1450571..1450804 | + | 234 | WP_001278287.1 | DUF905 family protein | - |
| LO741_RS06940 (1450894) | 1450894..1451712 | + | 819 | WP_001175153.1 | DUF932 domain-containing protein | - |
| LO741_RS06945 (1451738) | 1451738..1451878 | - | 141 | WP_000997937.1 | hypothetical protein | - |
| LO741_RS06950 (1451978) | 1451978..1452457 | + | 480 | WP_001696591.1 | antirestriction protein | - |
| LO741_RS06955 (1452473) | 1452473..1452949 | + | 477 | WP_001696592.1 | RadC family protein | - |
| LO741_RS06960 (1453036) | 1453036..1453257 | + | 222 | Protein_1359 | DUF987 domain-containing protein | - |
| LO741_RS06965 (1453337) | 1453337..1453705 | + | 369 | WP_001285605.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LO741_RS06970 (1453795) | 1453795..1454172 | + | 378 | WP_000854694.1 | TA system toxin CbtA family protein | Toxin Detail |
| LO741_RS06975 (1454169) | 1454169..1454318 | + | 150 | Protein_1362 | DUF5983 family protein | - |
| LO741_RS06980 (1454394) | 1454394..1454591 | + | 198 | WP_086795284.1 | DUF957 domain-containing protein | - |
| LO741_RS06985 (1454676) | 1454676..1455518 | + | 843 | WP_021572009.1 | DUF4942 domain-containing protein | - |
| LO741_RS06990 (1455798) | 1455798..1456334 | - | 537 | WP_000942807.1 | Type II secretion system protein M | VF |
| LO741_RS06995 (1456336) | 1456336..1457514 | - | 1179 | WP_000097200.1 | Type II secretion system protein L | VF |
| LO741_RS07000 (1457511) | 1457511..1458488 | - | 978 | WP_000633196.1 | Putative type II secretion system protein K | VF |
| LO741_RS07005 (1458485) | 1458485..1459090 | - | 606 | WP_001318033.1 | Type II secretion system protein J | VF |
| LO741_RS07010 (1459087) | 1459087..1459458 | - | 372 | WP_000820091.1 | Type II secretion system protein I | VF |
| LO741_RS07015 (1459455) | 1459455..1460018 | - | 564 | WP_001115149.1 | Type II secretion system protein H | VF |
| LO741_RS07020 (1460022) | 1460022..1460477 | - | 456 | WP_001087296.1 | type II secretion system major pseudopilin GspG | - |
| LO741_RS07025 (1460494) | 1460494..1461717 | - | 1224 | WP_001173415.1 | type II secretion system inner membrane protein GspF | - |
| LO741_RS07030 (1461717) | 1461717..1463210 | - | 1494 | WP_000249319.1 | type II secretion system ATPase GspE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|