MGE detailed information
MGE type: Mobilizable plasmid MGE length: 76208 bp
Accession: NZ_CP087281 Location: 1..76208 Organism: Leclercia adecarboxylata strain SH19PE29 Replicon: plasmid pYUSHP29-1
Accession: NZ_CP087281 Location: 1..76208 Organism: Leclercia adecarboxylata strain SH19PE29 Replicon: plasmid pYUSHP29-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LO739_RS22945 (LO739_22940) | 209..1414 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| LO739_RS22950 (LO739_22945) | 1414..2388 | + | 975 | WP_000064119.1 | ParB family protein | - |
| LO739_RS22955 (LO739_22950) | 2470..3741 | - | 1272 | WP_001754953.1 | Y-family DNA polymerase | - |
| LO739_RS22960 (LO739_22955) | 3741..4172 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LO739_RS22965 (LO739_22960) | 4578..6065 | + | 1488 | Protein_4 | group II intron reverse transcriptase/maturase | - |
| LO739_RS22970 (LO739_22965) | 6217..6914 | + | 698 | WP_223229472.1 | IS1-like element IS1X3 family transposase | - |
| LO739_RS22975 (LO739_22970) | 6924..7232 | + | 309 | Protein_6 | replication initiation protein | - |
| LO739_RS22980 (LO739_22975) | 8635..9603 | + | 969 | WP_030005799.1 | IS5 family transposase IS903B | Transposase |
| LO739_RS22985 (LO739_22980) | 9743..10129 | - | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| LO739_RS22990 (LO739_22985) | 10711..10944 | + | 234 | Protein_9 | transposase | - |
| LO739_RS22995 (LO739_22990) | 10977..12728 | - | 1752 | Protein_10 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| LO739_RS23000 (LO739_22995) | 12732..13124 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LO739_RS23005 (LO739_23000) | 13262..14146 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| LO739_RS23010 (LO739_23005) | 14178..15377 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| LO739_RS23015 (LO739_23010) | 15483..16133 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LO739_RS23020 (LO739_23015) | 16165..16407 | - | 243 | WP_000844627.1 | transposase | - |
| LO739_RS23025 (LO739_23020) | 16570..17115 | + | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| LO739_RS23030 (LO739_23025) | 17252..17824 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| LO739_RS23035 (LO739_23030) | 17861..19252 | + | 1392 | WP_230431556.1 | ISKra4 family transposase ISKpn19 | Transposase |
| LO739_RS23040 (LO739_23035) | 19285..19713 | + | 429 | Protein_19 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LO739_RS23045 (LO739_23040) | 20032..20688 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| LO739_RS23050 (LO739_23045) | 21084..21700 | + | 617 | Protein_21 | transposase | - |
| LO739_RS23055 (LO739_23050) | 21767..22471 | + | 705 | WP_086525284.1 | IS6 family transposase IS26 | Transposase |
| LO739_RS23060 (LO739_23055) | 22417..23529 | - | 1113 | WP_024166810.1 | IS91 family transposase ISAzo26 | Transposase |
| LO739_RS23065 (LO739_23060) | 23685..24158 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| LO739_RS23070 (LO739_23065) | 24405..25109 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LO739_RS23075 (LO739_23070) | 25163..25435 | - | 273 | Protein_26 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| LO739_RS23080 (LO739_23075) | 25566..25916 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| LO739_RS23085 (LO739_23080) | 26119..27132 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LO739_RS23090 (LO739_23085) | 27424..27978 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| LO739_RS23095 (LO739_23090) | 28109..28939 | + | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| LO739_RS23100 (LO739_23095) | 29077..29709 | + | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| LO739_RS23105 (LO739_23100) | 29794..30246 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| LO739_RS23110 (LO739_23105) | 30469..30816 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LO739_RS23115 (LO739_23110) | 30810..31649 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| LO739_RS23120 (LO739_23115) | 31777..31980 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| LO739_RS23125 (LO739_23120) | 32136..33341 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| LO739_RS23130 (LO739_23125) | 33352..33657 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| LO739_RS23135 (LO739_23130) | 33701..33766 | + | 66 | Protein_38 | EAL domain-containing protein | - |
| LO739_RS23140 (LO739_23135) | 33884..34648 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| LO739_RS23145 (LO739_23140) | 35141..35725 | - | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| LO739_RS23150 (LO739_23145) | 35725..36963 | - | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| LO739_RS23155 (LO739_23150) | 36960..37865 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| LO739_RS23160 (LO739_23155) | 37987..38691 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LO739_RS23165 (LO739_23160) | 38756..39049 | + | 294 | Protein_44 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| LO739_RS23175 (LO739_23170) | 39206..39907 | - | 702 | WP_230431555.1 | IS6 family transposase IS26 | Transposase |
| LO739_RS23180 (LO739_23175) | 39991..40875 | - | 885 | WP_000155092.1 | hypothetical protein | ARG |
| LO739_RS23185 (LO739_23180) | 40931..42406 | - | 1476 | WP_000052512.1 | putative ABC transporter ATP-binding protein YbiT | ARG |
| LO739_RS23190 (LO739_23185) | 42856..43560 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LO739_RS23195 (LO739_23190) | 43622..43975 | - | 354 | Protein_49 | IS91 family transposase ISPps1 | Transposase |
| LO739_RS23200 (LO739_23195) | 44087..44392 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| LO739_RS23205 (LO739_23200) | 44420..45634 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| LO739_RS23210 (LO739_23205) | 45851..46735 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| LO739_RS23215 (LO739_23210) | 46766..47596 | - | 831 | Protein_53 | IS91 family transposase ISVsa3 | Transposase |
| LO739_RS23220 (LO739_23215) | 47660..48364 | + | 705 | WP_001067784.1 | IS6 family transposase IS1006 | Transposase |
| LO739_RS23225 (LO739_23220) | 48449..48886 | - | 438 | WP_000030933.1 | hypothetical protein | - |
| LO739_RS23230 (LO739_23225) | 48937..49716 | - | 780 | WP_223307992.1 | hypothetical protein | - |
| LO739_RS23235 (LO739_23230) | 49722..50426 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LO739_RS23240 (LO739_23235) | 50556..51371 | + | 816 | WP_000018323.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LO739_RS23245 (LO739_23240) | 51508..51909 | - | 402 | WP_001183556.1 | LysR substrate-binding domain-containing protein | - |
| LO739_RS23250 (LO739_23245) | 51949..52653 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LO739_RS23255 (LO739_23250) | 52718..53968 | - | 1251 | Protein_61 | transposase | - |
| LO739_RS23260 (LO739_23255) | 54043..54711 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| LO739_RS23265 (LO739_23260) | 54747..54983 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| LO739_RS23270 (LO739_23265) | 54980..55342 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| LO739_RS23275 (LO739_23270) | 55360..57054 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| LO739_RS23280 (LO739_23275) | 57106..57528 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| LO739_RS23285 (LO739_23280) | 57564..57839 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| LO739_RS23290 (LO739_23285) | 57853..58203 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| LO739_RS23295 (LO739_23290) | 58275..58709 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| LO739_RS23300 (LO739_23295) | 58742..59638 | + | 897 | Protein_70 | Methyl-accepting chemotaxis protein McpQ | VF |
| LO739_RS23305 (LO739_23300) | 59828..60502 | + | 675 | Protein_71 | IS5 family transposase IS903 | Transposase |
| LO739_RS23310 (LO739_23305) | 60608..61444 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| LO739_RS23315 (LO739_23310) | 61444..62247 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LO739_RS23325 (LO739_23320) | 63548..64162 | - | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LO739_RS23330 (LO739_23325) | 64288..67173 | + | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LO739_RS23335 (LO739_23330) | 67336..67419 | - | 84 | Protein_77 | SOS response-associated peptidase | - |
| LO739_RS23340 (LO739_23335) | 67939..68040 | + | 102 | Protein_78 | Tn3 family transposase | - |
| LO739_RS23345 (LO739_23340) | 68060..69136 | - | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| LO739_RS23350 (LO739_23345) | 69418..70274 | - | 857 | Protein_80 | IS3 family transposase ISEc15 | Transposase |
| LO739_RS23355 (LO739_23350) | 70478..70894 | - | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LO739_RS23360 (LO739_23355) | 70891..71121 | - | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LO739_RS23365 (LO739_23360) | 71695..72045 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| LO739_RS23370 (LO739_23365) | 72096..72839 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| LO739_RS23375 (LO739_23370) | 72836..73612 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| LO739_RS23380 (LO739_23375) | 73670..73927 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| LO739_RS23385 (LO739_23380) | 74056..74160 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| LO739_RS23390 (LO739_23385) | 74690..75556 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| LO739_RS23395 (LO739_23390) | 75733..76002 | - | 270 | WP_000339857.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|