MGE detailed information
MGE type: Genomic_island MGE length: 42310 bp
Accession: NZ_CP087226 Location: 1656181..1698490 Organism: Dickeya fangzhongdai strain B16 Replicon: chromosome
Accession: NZ_CP087226 Location: 1656181..1698490 Organism: Dickeya fangzhongdai strain B16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QR68_RS07230 (QR68_07230) | 1652522..1653463 | + | 942 | WP_231348851.1 | helix-turn-helix domain-containing protein | - |
| QR68_RS07235 (QR68_07235) | 1653792..1655459 | + | 1668 | WP_038918463.1 | thiamine pyrophosphate-binding protein | - |
| QR68_RS07240 (QR68_07240) | 1655635..1656120 | + | 486 | WP_038918465.1 | DUF2501 domain-containing protein | - |
| QR68_RS07245 (QR68_07245) | 1656181..1656771 | - | 591 | WP_038918466.1 | flavin reductase family protein | - |
| QR68_RS07250 (QR68_07250) | 1656999..1657331 | + | 333 | WP_071605183.1 | DUF1971 domain-containing protein | - |
| QR68_RS07255 (QR68_07255) | 1657342..1657680 | + | 339 | WP_038918468.1 | DUF1869 domain-containing protein | - |
| QR68_RS07260 (QR68_07260) | 1657980..1659179 | + | 1200 | WP_049842690.1 | multidrug effflux MFS transporter | - |
| QR68_RS07265 (QR68_07265) | 1659222..1659320 | + | 99 | Protein_1415 | flavodoxin | - |
| QR68_RS07270 (QR68_07270) | 1659521..1659847 | - | 327 | WP_038920877.1 | EthD family reductase | - |
| QR68_RS07275 (QR68_07275) | 1660155..1661066 | + | 912 | WP_038918469.1 | hypothetical protein | VF |
| QR68_RS07280 (QR68_07280) | 1661225..1662145 | - | 921 | WP_038918470.1 | DMT family transporter | - |
| QR68_RS07285 (QR68_07285) | 1662433..1663269 | + | 837 | WP_038918471.1 | transporter substrate-binding domain-containing protein | - |
| QR68_RS07290 (QR68_07290) | 1663273..1663962 | + | 690 | WP_038918472.1 | 5-oxoprolinase subunit PxpB | - |
| QR68_RS07295 (QR68_07295) | 1663959..1664930 | + | 972 | WP_038918473.1 | biotin-dependent carboxyltransferase family protein | - |
| QR68_RS07300 (QR68_07300) | 1664948..1665718 | + | 771 | WP_038668683.1 | 5-oxoprolinase subunit PxpA | - |
| QR68_RS07305 (QR68_07305) | 1665787..1667076 | - | 1290 | WP_038920879.1 | HipA domain-containing protein | - |
| QR68_RS07310 (QR68_07310) | 1667066..1667404 | - | 339 | WP_038918474.1 | helix-turn-helix transcriptional regulator | - |
| QR68_RS07315 (QR68_07315) | 1667644..1668846 | - | 1203 | WP_038918475.1 | pyridoxal phosphate-dependent aminotransferase | - |
| QR68_RS07320 (QR68_07320) | 1669191..1670114 | + | 924 | WP_038918477.1 | nitrogen assimilation transcriptional regulator NAC | - |
| QR68_RS07325 (QR68_07325) | 1670223..1670654 | + | 432 | WP_071605184.1 | acetyl-CoA carboxylase | - |
| QR68_RS07330 (QR68_07330) | 1670777..1671529 | + | 753 | WP_038918478.1 | SDR family oxidoreductase | - |
| QR68_RS07335 (QR68_07335) | 1671552..1672247 | + | 696 | WP_038918479.1 | amino acid ABC transporter permease | - |
| QR68_RS07340 (QR68_07340) | 1672253..1673023 | + | 771 | WP_038918480.1 | amino acid ABC transporter permease | - |
| QR68_RS07345 (QR68_07345) | 1673020..1673754 | + | 735 | WP_038660262.1 | hypothetical protein | VF |
| QR68_RS07350 (QR68_07350) | 1674021..1674428 | - | 408 | WP_038918481.1 | very short patch repair endonuclease | - |
| QR68_RS07355 (QR68_07355) | 1674533..1680373 | - | 5841 | WP_038918482.1 | DEAD/DEAH box helicase | - |
| QR68_RS07360 (QR68_07360) | 1680393..1682480 | - | 2088 | WP_038918483.1 | hypothetical protein | - |
| QR68_RS07365 (QR68_07365) | 1682493..1685054 | - | 2562 | WP_038918484.1 | hypothetical protein | - |
| QR68_RS07370 (QR68_07370) | 1685051..1686286 | - | 1236 | WP_038918486.1 | DNA cytosine methyltransferase | - |
| QR68_RS07375 (QR68_07375) | 1686571..1687593 | + | 1023 | WP_038920880.1 | DUF4917 family protein | - |
| QR68_RS07380 (QR68_07380) | 1688338..1689282 | + | 945 | WP_038918487.1 | zincin-like metallopeptidase domain-containing protein | - |
| QR68_RS07385 (QR68_07385) | 1689603..1689839 | + | 237 | WP_038918488.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| QR68_RS07390 (QR68_07390) | 1689842..1690156 | + | 315 | WP_038900914.1 | CcdB family protein | Toxin Detail |
| QR68_RS07395 (QR68_07395) | 1690153..1690275 | - | 123 | Protein_1441 | mobilization protein mobC | - |
| QR68_RS07400 (QR68_07400) | 1690479..1692131 | + | 1653 | WP_038918489.1 | hypothetical protein | - |
| QR68_RS07405 (QR68_07405) | 1692131..1693621 | + | 1491 | WP_038918490.1 | hypothetical protein | - |
| QR68_RS07410 (QR68_07410) | 1693893..1695002 | - | 1110 | WP_198677320.1 | hypothetical protein | - |
| QR68_RS07415 (QR68_07415) | 1695125..1696236 | + | 1112 | WP_121479603.1 | IS3 family transposase IS1400 | Transposase |
| QR68_RS07420 (QR68_07420) | 1696248..1697363 | - | 1116 | WP_231348852.1 | P-loop NTPase fold protein | - |
| QR68_RS07425 (QR68_07425) | 1697382..1698490 | - | 1109 | Protein_1447 | IS3 family transposase | - |
| QR68_RS07430 (QR68_07430) | 1698543..1698689 | + | 147 | WP_231348853.1 | hypothetical protein | - |
| QR68_RS07440 (QR68_07440) | 1699043..1702156 | - | 3114 | WP_038918514.1 | beta-galactosidase | - |
| QR68_RS07445 (QR68_07445) | 1702339..1703412 | - | 1074 | WP_038660256.1 | LacI family DNA-binding transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|