MGE detailed information
MGE type: Genomic_island MGE length: 21203 bp
Accession: NZ_CP087195 Location: 4615520..4636722 Organism: Pseudomonas brassicacearum strain B21-016 Replicon: chromosome
Accession: NZ_CP087195 Location: 4615520..4636722 Organism: Pseudomonas brassicacearum strain B21-016 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOY47_RS20200 (LOY47_20185) | 4611135..4611341 | + | 207 | WP_027912993.1 | hypothetical protein | - |
| LOY47_RS20205 (LOY47_20190) | 4611395..4611703 | - | 309 | WP_003203770.1 | AzlD domain-containing protein | - |
| LOY47_RS20210 (LOY47_20195) | 4611700..4612410 | - | 711 | WP_003203772.1 | AzlC family ABC transporter permease | - |
| LOY47_RS20215 (LOY47_20200) | 4612504..4613268 | - | 765 | WP_028236718.1 | TSUP family transporter | - |
| LOY47_RS20220 (LOY47_20205) | 4613502..4614416 | + | 915 | WP_003203776.1 | LysR family transcriptional regulator | - |
| LOY47_RS20225 (LOY47_20210) | 4614655..4615083 | + | 429 | WP_013693809.1 | DUF2628 domain-containing protein | - |
| LOY47_RS20230 (LOY47_20215) | 4615184..4615336 | - | 153 | WP_167780664.1 | hypothetical protein | - |
| LOY47_RS20235 (LOY47_20220) | 4615505..4615873 | + | 369 | Protein_4011 | phosphotransferase | - |
| LOY47_RS20240 (LOY47_20225) | 4615931..4616257 | - | 327 | WP_013693810.1 | PDZ domain-containing protein | - |
| LOY47_RS20245 (LOY47_20230) | 4616889..4617338 | - | 450 | WP_013693812.1 | PACE efflux transporter | - |
| LOY47_RS20250 (LOY47_20235) | 4617445..4618329 | + | 885 | WP_258636018.1 | LysR substrate-binding domain-containing protein | - |
| LOY47_RS20255 (LOY47_20240) | 4618955..4619164 | + | 210 | WP_003203789.1 | hypothetical protein | - |
| LOY47_RS20260 (LOY47_20245) | 4619302..4620033 | - | 732 | WP_100264116.1 | polyphenol oxidase family protein | - |
| LOY47_RS20265 (LOY47_20250) | 4620224..4620661 | - | 438 | WP_233839792.1 | GNAT family N-acetyltransferase | - |
| LOY47_RS20270 (LOY47_20255) | 4620725..4621231 | - | 507 | WP_100264118.1 | AAA family ATPase | - |
| LOY47_RS20275 (LOY47_20260) | 4621532..4621732 | - | 201 | WP_013693816.1 | hypothetical protein | - |
| LOY47_RS20280 (LOY47_20265) | 4621838..4622263 | - | 426 | WP_003203795.1 | hypothetical protein | - |
| LOY47_RS20285 (LOY47_20270) | 4622517..4622735 | - | 219 | WP_043042785.1 | hypothetical protein | - |
| LOY47_RS20290 (LOY47_20275) | 4622797..4623342 | - | 546 | WP_043042784.1 | DUF4410 domain-containing protein | - |
| LOY47_RS20295 (LOY47_20280) | 4624044..4624469 | + | 426 | WP_258636024.1 | hypothetical protein | - |
| LOY47_RS20300 (LOY47_20285) | 4624741..4625031 | + | 291 | WP_198286652.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOY47_RS20305 (LOY47_20290) | 4625034..4625342 | + | 309 | WP_038858737.1 | putative addiction module antidote protein | Antitoxin Detail |
| LOY47_RS20310 (LOY47_20295) | 4625469..4625741 | - | 273 | WP_003203821.1 | hypothetical protein | - |
| LOY47_RS20315 (LOY47_20300) | 4626394..4626726 | + | 333 | WP_218180050.1 | IS66 family transposase ISPpu19 | Transposase |
| LOY47_RS20320 (LOY47_20305) | 4626723..4627058 | + | 336 | WP_258636028.1 | IS66 family transposase ISPsy43 | Transposase |
| LOY47_RS20325 (LOY47_20310) | 4627140..4628708 | + | 1569 | WP_258636035.1 | IS66 family transposase ISPpu19 | Transposase |
| LOY47_RS20330 (LOY47_20315) | 4629251..4629748 | - | 498 | WP_258636037.1 | hypothetical protein | - |
| LOY47_RS20335 (LOY47_20320) | 4630017..4630886 | - | 870 | WP_258636042.1 | HEPN domain-containing protein | - |
| LOY47_RS20340 (LOY47_20325) | 4631266..4631526 | - | 261 | WP_258636046.1 | hypothetical protein | - |
| LOY47_RS20345 (LOY47_20330) | 4632760..4633626 | + | 867 | WP_003203827.1 | HTH-type transcriptional activator RhaS | VF |
| LOY47_RS20350 (LOY47_20335) | 4633947..4634120 | + | 174 | WP_038856576.1 | hypothetical protein | - |
| LOY47_RS20355 (LOY47_20340) | 4634173..4634565 | + | 393 | Protein_4035 | type II toxin-antitoxin system HicB family antitoxin | - |
| LOY47_RS20360 (LOY47_20345) | 4635223..4635852 | + | 630 | WP_028236709.1 | LysE family translocator | - |
| LOY47_RS20365 (LOY47_20350) | 4636078..4636722 | - | 645 | WP_003203831.1 | hypothetical protein | - |
| LOY47_RS20375 (LOY47_20360) | 4637065..4638348 | + | 1284 | WP_003203834.1 | FAD-binding oxidoreductase | - |
| LOY47_RS20395 (LOY47_20380) | 4639061..4639834 | - | 774 | WP_003203835.1 | SDR family oxidoreductase | - |
| LOY47_RS20400 (LOY47_20385) | 4639831..4641042 | - | 1212 | WP_258636047.1 | O-succinylhomoserine sulfhydrylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|