MGE detailed information
MGE type: Genomic_island MGE length: 22413 bp
Accession: NZ_CP087190 Location: 924805..947217 Organism: Pseudomonas sp. B21-023 Replicon: chromosome
Accession: NZ_CP087190 Location: 924805..947217 Organism: Pseudomonas sp. B21-023 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOY42_RS04210 (LOY42_04215) | 919920..920120 | - | 201 | WP_046854173.1 | DNA gyrase inhibitor YacG | - |
| LOY42_RS04215 (LOY42_04220) | 920117..920740 | - | 624 | WP_038706809.1 | dephospho-CoA kinase | - |
| LOY42_RS04220 (LOY42_04225) | 920740..921606 | - | 867 | WP_258599846.1 | A24 family peptidase | - |
| LOY42_RS04225 (LOY42_04230) | 921609..922817 | - | 1209 | WP_258599848.1 | type II secretion system F family protein | - |
| LOY42_RS04230 (LOY42_04235) | 923045..923455 | + | 411 | WP_258599850.1 | pilin | - |
| LOY42_RS04240 (LOY42_04245) | 923871..924794 | + | 924 | WP_258599852.1 | hypothetical protein | - |
| LOY42_RS04245 (LOY42_04250) | 924805..925485 | + | 681 | WP_258599854.1 | hypothetical protein | - |
| LOY42_RS04250 (LOY42_04255) | 925492..926103 | - | 612 | WP_258599856.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LOY42_RS04255 (LOY42_04260) | 926237..926530 | - | 294 | WP_258599858.1 | hypothetical protein | - |
| LOY42_RS04260 (LOY42_04265) | 926558..929335 | - | 2778 | WP_258599860.1 | phage tail tape measure protein | - |
| LOY42_RS04265 (LOY42_04270) | 929332..930192 | - | 861 | WP_258599862.1 | hypothetical protein | - |
| LOY42_RS04270 (LOY42_04275) | 930183..930395 | - | 213 | WP_258599864.1 | hypothetical protein | - |
| LOY42_RS04275 (LOY42_04280) | 930373..930798 | - | 426 | WP_258599866.1 | hypothetical protein | - |
| LOY42_RS04280 (LOY42_04285) | 930795..931229 | - | 435 | WP_258599868.1 | DUF5681 domain-containing protein | - |
| LOY42_RS04285 (LOY42_04290) | 931213..931398 | - | 186 | WP_258599870.1 | hypothetical protein | - |
| LOY42_RS04290 (LOY42_04295) | 932390..933388 | - | 999 | WP_258599871.1 | hypothetical protein | - |
| LOY42_RS04295 (LOY42_04300) | 933544..933765 | + | 222 | WP_258599872.1 | hypothetical protein | - |
| LOY42_RS04300 (LOY42_04305) | 933856..934326 | + | 471 | WP_258599873.1 | hypothetical protein | - |
| LOY42_RS04305 (LOY42_04310) | 934667..935068 | - | 402 | WP_258599874.1 | helix-turn-helix domain-containing protein | - |
| LOY42_RS04310 (LOY42_04315) | 935129..935398 | - | 270 | WP_258599875.1 | helix-turn-helix domain-containing protein | - |
| LOY42_RS04315 (LOY42_04320) | 935864..936076 | - | 213 | WP_258599876.1 | hypothetical protein | - |
| LOY42_RS04320 (LOY42_04325) | 936073..936273 | - | 201 | WP_258599877.1 | helix-turn-helix domain-containing protein | - |
| LOY42_RS04325 (LOY42_04330) | 936425..936919 | + | 495 | WP_258599878.1 | hypothetical protein | - |
| LOY42_RS04330 (LOY42_04335) | 936912..938120 | - | 1209 | WP_258599880.1 | IS91 family transposase ISShvi3 | Transposase |
| LOY42_RS04335 (LOY42_04340) | 938603..939058 | - | 456 | WP_258599881.1 | hypothetical protein | - |
| LOY42_RS04340 (LOY42_04345) | 940032..944171 | + | 4140 | WP_258599883.1 | tetratricopeptide repeat protein | - |
| LOY42_RS04345 (LOY42_04350) | 945170..945310 | + | 141 | WP_258599885.1 | hypothetical protein | - |
| LOY42_RS04350 (LOY42_04355) | 945303..945533 | + | 231 | WP_102682137.1 | hypothetical protein | - |
| LOY42_RS04355 (LOY42_04360) | 945679..946331 | - | 653 | Protein_847 | hypothetical protein | - |
| LOY42_RS04360 (LOY42_04365) | 946698..946988 | - | 291 | WP_258599887.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOY42_RS04365 (LOY42_04370) | 946978..947217 | - | 240 | WP_203648016.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOY42_RS04370 (LOY42_04375) | 947309..948796 | - | 1488 | WP_258599889.1 | methylenetetrahydrofolate reductase C-terminal domain-containing protein | - |
| LOY42_RS04375 (LOY42_04380) | 949098..951401 | + | 2304 | WP_258599891.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| LOY42_RS04380 (LOY42_04385) | 951469..951987 | + | 519 | WP_258599893.1 | histidine phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|