MGE detailed information
MGE type: IS/Tn MGE length: 1425 bp
Accession: NZ_CP087187 Location: 1439787..1441211 Organism: Pseudomonas atacamensis strain B21-026 Replicon: chromosome
Accession: NZ_CP087187 Location: 1439787..1441211 Organism: Pseudomonas atacamensis strain B21-026 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LOY41_RS06260 (LOY41_06250) | 1435881..1436384 | + | 504 | WP_110644971.1 | DUF4142 domain-containing protein | - |
LOY41_RS06265 (LOY41_06255) | 1436546..1436956 | - | 411 | WP_016771301.1 | low affinity iron permease family protein | - |
LOY41_RS06270 (LOY41_06260) | 1437116..1437886 | + | 771 | WP_110644972.1 | trans-aconitate 2-methyltransferase | - |
LOY41_RS06275 (LOY41_06265) | 1438414..1438641 | - | 228 | Protein_1232 | transcriptional regulator | - |
LOY41_RS06280 (LOY41_06270) | 1438701..1439108 | - | 408 | WP_024011974.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
LOY41_RS06285 (LOY41_06275) | 1439144..1439323 | - | 180 | WP_016771297.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
LOY41_RS06290 (LOY41_06280) | 1439396..1439656 | - | 261 | WP_163032966.1 | hypothetical protein | - |
LOY41_RS06295 (LOY41_06285) | 1439787..1441211 | - | 1425 | WP_163032960.1 | IS1182 family transposase ISPsy6 | Transposase |
LOY41_RS06305 (LOY41_06295) | 1441589..1442473 | - | 885 | WP_016771295.1 | alpha/beta hydrolase | - |
LOY41_RS06310 (LOY41_06300) | 1442790..1443482 | - | 693 | WP_122704859.1 | pseudouridine synthase | - |
LOY41_RS06315 (LOY41_06305) | 1443516..1443746 | - | 231 | WP_073473113.1 | cysteine-rich CWC family protein | - |
LOY41_RS06320 (LOY41_06310) | 1443739..1445226 | - | 1488 | WP_122704857.1 | sensor domain-containing diguanylate cyclase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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