MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 23562 bp
Accession: NZ_CP087181 Location: 5107994..5131555 Organism: Pseudomonas sp. B21-031 Replicon: chromosome
Accession: NZ_CP087181 Location: 5107994..5131555 Organism: Pseudomonas sp. B21-031 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOY53_RS22820 (LOY53_22810) | 5103911..5104516 | + | 606 | WP_252825871.1 | CDP-alcohol phosphatidyltransferase family protein | - |
| LOY53_RS22825 (LOY53_22815) | 5104547..5106304 | + | 1758 | WP_258703312.1 | bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase | - |
| LOY53_RS22830 (LOY53_22820) | 5106301..5107623 | + | 1323 | WP_258703313.1 | phosphatase PAP2/dual specificity phosphatase family protein | - |
| LOY53_RS22835 (LOY53_22825) | 5107620..5108051 | + | 432 | WP_252825874.1 | hypothetical protein | - |
| LOY53_RS22840 (LOY53_22830) | 5108062..5108685 | + | 624 | WP_027595452.1 | lysophospholipid acyltransferase family protein | - |
| LOY53_RS22845 (LOY53_22835) | 5108687..5109619 | + | 933 | WP_027595453.1 | hypothetical protein | VF |
| LOY53_RS22850 (LOY53_22840) | 5109654..5110061 | - | 408 | WP_099430452.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LOY53_RS22855 (LOY53_22845) | 5110058..5110285 | - | 228 | WP_099430453.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LOY53_RS22860 (LOY53_22850) | 5110561..5110905 | + | 345 | WP_003251579.1 | cupin domain-containing protein | - |
| LOY53_RS22865 (LOY53_22855) | 5111240..5112127 | - | 888 | WP_027595454.1 | 3-hydroxyisobutyrate dehydrogenase | - |
| LOY53_RS22870 (LOY53_22860) | 5112138..5113664 | - | 1527 | WP_085273919.1 | CoA-acylating methylmalonate-semialdehyde dehydrogenase | - |
| LOY53_RS22875 (LOY53_22865) | 5113797..5114747 | + | 951 | WP_258703314.1 | LysR family transcriptional regulator | - |
| LOY53_RS22880 (LOY53_22870) | 5115556..5116056 | + | 501 | WP_258703315.1 | hypothetical protein | - |
| LOY53_RS22885 (LOY53_22875) | 5116060..5116602 | + | 543 | WP_258703316.1 | hypothetical protein | - |
| LOY53_RS22890 (LOY53_22880) | 5117001..5117651 | + | 651 | WP_258703317.1 | hypothetical protein | - |
| LOY53_RS22895 (LOY53_22885) | 5118292..5118726 | + | 435 | WP_104962567.1 | hypothetical protein | - |
| LOY53_RS22900 (LOY53_22890) | 5119456..5120016 | + | 561 | WP_258704184.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| LOY53_RS22905 (LOY53_22895) | 5120313..5121122 | - | 810 | WP_258703318.1 | hypothetical protein | - |
| LOY53_RS22910 | 5121293..5121415 | + | 123 | WP_258704193.1 | hypothetical protein | - |
| LOY53_RS22915 (LOY53_22900) | 5121516..5122526 | - | 1011 | WP_258703319.1 | hypothetical protein | - |
| LOY53_RS22920 (LOY53_22905) | 5122685..5123725 | - | 1041 | WP_258703320.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LOY53_RS22925 (LOY53_22910) | 5124084..5124221 | + | 138 | Protein_4498 | LysR family transcriptional regulator | - |
| LOY53_RS22930 (LOY53_22915) | 5124363..5124851 | - | 489 | WP_099455320.1 | hypothetical protein | VF |
| LOY53_RS22935 (LOY53_22920) | 5124856..5126124 | - | 1269 | WP_258703321.1 | hypothetical protein | VF |
| LOY53_RS22940 (LOY53_22925) | 5126121..5126687 | - | 567 | WP_099430460.1 | YfiR family protein | - |
| LOY53_RS22945 (LOY53_22930) | 5126766..5128841 | - | 2076 | WP_258703322.1 | exodeoxyribonuclease V subunit alpha | - |
| LOY53_RS22950 (LOY53_22935) | 5128838..5132515 | - | 3678 | WP_258703323.1 | exodeoxyribonuclease V subunit beta | - |
| LOY53_RS22955 (LOY53_22940) | 5132512..5135994 | - | 3483 | WP_258703324.1 | exodeoxyribonuclease V subunit gamma | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|