MGE detailed information
MGE type: Genomic_island MGE length: 11601 bp
Accession: NZ_CP087136 Location: 1575646..1587246 Organism: Escherichia coli strain JW5503 Replicon: chromosome
Accession: NZ_CP087136 Location: 1575646..1587246 Organism: Escherichia coli strain JW5503 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOX89_RS07740 (1572461) | 1572461..1574146 | - | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| LOX89_RS07745 (1574349) | 1574349..1574471 | + | 123 | WP_120795387.1 | protein YneP | - |
| LOX89_RS07750 (1574437) | 1574437..1575594 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| LOX89_RS07755 (1575646) | 1575646..1577328 | - | 1683 | WP_001295684.1 | sulfatase | - |
| LOX89_RS07760 (1577730) | 1577730..1578491 | - | 762 | WP_000060495.1 | acid stress response transcriptional regulator YdeO | - |
| LOX89_RS07765 (1578566) | 1578566..1578763 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| LOX89_RS07770 (1579011) | 1579011..1581290 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| LOX89_RS07775 (1581624) | 1581624..1582538 | - | 915 | WP_000520676.1 | hypothetical protein | VF |
| LOX89_RS07780 (1582597) | 1582597..1583100 | - | 504 | WP_000825452.1 | hypothetical protein | VF |
| LOX89_RS07785 (1583113) | 1583113..1583643 | - | 531 | WP_000876763.1 | hypothetical protein | VF |
| LOX89_RS07790 (1583657) | 1583657..1584883 | - | 1227 | Protein_1526 | hypothetical protein | VF |
| LOX89_RS07795 (1585138) | 1585138..1585346 | - | 209 | Protein_1527 | AraC family transcriptional regulator | - |
| LOX89_RS07800 (1585658) | 1585658..1586980 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| LOX89_RS07805 (1586980) | 1586980..1587246 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.003 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0 |