MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 81304 bp
Accession: NZ_CP087132 Location: 3065514..3146817 Organism: Flavobacterium sp. F-29 Replicon: chromosome
Accession: NZ_CP087132 Location: 3065514..3146817 Organism: Flavobacterium sp. F-29 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNP19_RS13240 (LNP19_13240) | 3061975..3062652 | - | 678 | WP_230062374.1 | DUF4294 domain-containing protein | - |
| LNP19_RS13245 (LNP19_13245) | 3062733..3063821 | + | 1089 | WP_230062375.1 | M42 family metallopeptidase | - |
| LNP19_RS13250 (LNP19_13250) | 3063947..3064324 | - | 378 | WP_230062376.1 | ankyrin repeat domain-containing protein | - |
| LNP19_RS13255 (LNP19_13255) | 3064561..3065022 | + | 462 | WP_230062377.1 | DUF1801 domain-containing protein | - |
| LNP19_RS13260 (LNP19_13260) | 3065046..3065585 | + | 540 | WP_230062378.1 | SRPBCC family protein | - |
| LNP19_RS13265 (LNP19_13265) | 3065666..3066619 | - | 954 | WP_230062379.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| LNP19_RS13270 (LNP19_13270) | 3066713..3069064 | - | 2352 | WP_230062380.1 | prolyl oligopeptidase family serine peptidase | - |
| LNP19_RS13275 (LNP19_13275) | 3069136..3069981 | - | 846 | WP_230064242.1 | Cof-type HAD-IIB family hydrolase | - |
| LNP19_RS13280 (LNP19_13280) | 3070180..3071130 | - | 951 | WP_230062381.1 | PhoH family protein | - |
| LNP19_RS13285 (LNP19_13285) | 3071326..3072156 | + | 831 | WP_230062382.1 | SAM-dependent chlorinase/fluorinase | - |
| LNP19_RS13290 (LNP19_13290) | 3072237..3072533 | + | 297 | WP_230062383.1 | antibiotic biosynthesis monooxygenase family protein | - |
| LNP19_RS13295 (LNP19_13295) | 3072597..3073322 | + | 726 | WP_230062384.1 | gliding motility-associated ABC transporter permease subunit GldF | - |
| LNP19_RS13300 (LNP19_13300) | 3073322..3075007 | + | 1686 | WP_230062385.1 | gliding motility-associated ABC transporter substrate-binding protein GldG | - |
| LNP19_RS13305 (LNP19_13305) | 3075114..3076232 | + | 1119 | WP_230062386.1 | DNA polymerase III subunit beta | - |
| LNP19_RS13310 (LNP19_13310) | 3076526..3078298 | - | 1773 | WP_230062387.1 | DNA mismatch repair protein | - |
| LNP19_RS13315 (LNP19_13315) | 3078384..3079217 | - | 834 | WP_230062388.1 | universal stress protein | - |
| LNP19_RS13320 (LNP19_13320) | 3080181..3081584 | + | 1404 | WP_230062389.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| LNP19_RS13325 (LNP19_13325) | 3082861..3083616 | + | 756 | WP_230062390.1 | hypothetical protein | - |
| LNP19_RS13330 (LNP19_13330) | 3083618..3084013 | + | 396 | WP_230062391.1 | DUF5675 family protein | - |
| LNP19_RS13335 (LNP19_13335) | 3084045..3084272 | + | 228 | WP_230062392.1 | hypothetical protein | - |
| LNP19_RS13340 (LNP19_13340) | 3085506..3085703 | + | 198 | WP_230062393.1 | hypothetical protein | - |
| LNP19_RS13345 (LNP19_13345) | 3085974..3087164 | + | 1191 | WP_230062394.1 | hypothetical protein | - |
| LNP19_RS13350 (LNP19_13350) | 3087409..3087549 | + | 141 | WP_230062395.1 | hypothetical protein | - |
| LNP19_RS13355 (LNP19_13355) | 3087588..3088154 | + | 567 | WP_230062396.1 | hypothetical protein | - |
| LNP19_RS13360 (LNP19_13360) | 3088253..3088936 | + | 684 | WP_230062397.1 | hypothetical protein | - |
| LNP19_RS13365 (LNP19_13365) | 3089435..3089638 | - | 204 | WP_072944544.1 | hypothetical protein | - |
| LNP19_RS13370 (LNP19_13370) | 3090003..3091925 | + | 1923 | WP_230062398.1 | helix-turn-helix domain-containing protein | - |
| LNP19_RS13375 (LNP19_13375) | 3092271..3093140 | - | 870 | WP_230062399.1 | hypothetical protein | - |
| LNP19_RS13380 (LNP19_13380) | 3093423..3093851 | - | 429 | WP_230062400.1 | hypothetical protein | - |
| LNP19_RS13385 (LNP19_13385) | 3093998..3094603 | + | 606 | WP_230062401.1 | hypothetical protein | - |
| LNP19_RS13390 (LNP19_13390) | 3094623..3094961 | + | 339 | WP_230062402.1 | hypothetical protein | - |
| LNP19_RS13395 (LNP19_13395) | 3095143..3095313 | + | 171 | WP_230062403.1 | hypothetical protein | - |
| LNP19_RS13400 (LNP19_13400) | 3095482..3095829 | + | 348 | WP_230062404.1 | hypothetical protein | - |
| LNP19_RS13405 (LNP19_13405) | 3095884..3096414 | + | 531 | WP_230062405.1 | hypothetical protein | - |
| LNP19_RS13410 (LNP19_13410) | 3096536..3096936 | - | 401 | Protein_2615 | hypothetical protein | - |
| LNP19_RS13415 (LNP19_13415) | 3097091..3097957 | - | 867 | WP_230062406.1 | hypothetical protein | - |
| LNP19_RS13420 (LNP19_13420) | 3098128..3098528 | - | 401 | Protein_2617 | hypothetical protein | - |
| LNP19_RS13425 (LNP19_13425) | 3098749..3099084 | + | 336 | WP_230062407.1 | hypothetical protein | - |
| LNP19_RS13430 (LNP19_13430) | 3099084..3099581 | + | 498 | WP_230062408.1 | endonuclease V | - |
| LNP19_RS13435 (LNP19_13435) | 3099747..3100511 | + | 765 | WP_230062409.1 | hypothetical protein | - |
| LNP19_RS13440 (LNP19_13440) | 3100517..3100900 | + | 384 | WP_230062410.1 | hypothetical protein | - |
| LNP19_RS13445 (LNP19_13445) | 3100991..3101521 | + | 531 | WP_230062411.1 | hypothetical protein | - |
| LNP19_RS13450 (LNP19_13450) | 3101779..3102048 | - | 270 | WP_230062412.1 | hypothetical protein | - |
| LNP19_RS13455 (LNP19_13455) | 3102516..3102860 | + | 345 | WP_230062413.1 | hypothetical protein | - |
| LNP19_RS13460 (LNP19_13460) | 3103097..3103708 | + | 612 | WP_230062414.1 | hypothetical protein | - |
| LNP19_RS13465 (LNP19_13465) | 3103796..3104037 | - | 242 | Protein_2626 | integrase core domain-containing protein | - |
| LNP19_RS13470 (LNP19_13470) | 3104205..3104549 | - | 345 | Protein_2627 | hypothetical protein | - |
| LNP19_RS13475 (LNP19_13475) | 3104672..3105403 | - | 732 | WP_230062415.1 | IS21-like element helper ATPase IstB | - |
| LNP19_RS13480 (LNP19_13480) | 3105426..3106991 | - | 1566 | WP_230062416.1 | IS21 family transposase | - |
| LNP19_RS13485 (LNP19_13485) | 3107452..3107622 | + | 171 | WP_230062417.1 | hypothetical protein | - |
| LNP19_RS13490 (LNP19_13490) | 3107946..3109703 | - | 1758 | WP_230062418.1 | reverse transcriptase domain-containing protein | - |
| LNP19_RS13495 (LNP19_13495) | 3109883..3110842 | + | 960 | WP_230062419.1 | BT4734/BF3469 family protein | - |
| LNP19_RS13500 (LNP19_13500) | 3111055..3113184 | + | 2130 | WP_230062420.1 | ATP-binding protein | - |
| LNP19_RS13505 (LNP19_13505) | 3113187..3114080 | + | 894 | WP_230062421.1 | hypothetical protein | - |
| LNP19_RS13510 (LNP19_13510) | 3116548..3119577 | + | 3030 | WP_230062422.1 | SusC/RagA family TonB-linked outer membrane protein | - |
| LNP19_RS13515 (LNP19_13515) | 3119589..3121001 | + | 1413 | WP_230062423.1 | RagB/SusD family nutrient uptake outer membrane protein | - |
| LNP19_RS13520 (LNP19_13520) | 3121003..3123642 | + | 2640 | WP_230062424.1 | prolyl oligopeptidase family serine peptidase | - |
| LNP19_RS13525 (LNP19_13525) | 3123715..3123969 | - | 255 | WP_230062425.1 | hypothetical protein | - |
| LNP19_RS13530 (LNP19_13530) | 3124008..3125807 | + | 1800 | WP_230062426.1 | hypothetical protein | - |
| LNP19_RS13535 (LNP19_13535) | 3125979..3126437 | - | 459 | WP_230062427.1 | RNA methyltransferase | - |
| LNP19_RS13540 (LNP19_13540) | 3126611..3127537 | - | 927 | WP_230062428.1 | HipA domain-containing protein | Toxin Detail |
| LNP19_RS13545 (LNP19_13545) | 3127530..3127844 | - | 315 | WP_230062429.1 | HipA N-terminal domain-containing protein | Antitoxin Detail |
| LNP19_RS13550 (LNP19_13550) | 3127847..3128056 | - | 210 | WP_230062430.1 | helix-turn-helix domain-containing protein | - |
| LNP19_RS13555 (LNP19_13555) | 3128288..3128785 | + | 498 | WP_230062431.1 | helix-turn-helix domain-containing protein | - |
| LNP19_RS13560 (LNP19_13560) | 3128785..3129432 | + | 648 | WP_230062432.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LNP19_RS13565 (LNP19_13565) | 3129454..3129570 | + | 117 | WP_255666013.1 | type II toxin-antitoxin system HigB family toxin | - |
| LNP19_RS13570 (LNP19_13570) | 3129615..3129971 | + | 357 | WP_230062433.1 | helix-turn-helix domain-containing protein | - |
| LNP19_RS13575 (LNP19_13575) | 3130683..3131300 | + | 618 | WP_230062434.1 | GNAT family N-acetyltransferase | - |
| LNP19_RS13580 (LNP19_13580) | 3131384..3132577 | + | 1194 | WP_230062435.1 | argininosuccinate synthase | - |
| LNP19_RS13585 (LNP19_13585) | 3132752..3133729 | + | 978 | WP_230062436.1 | N-acetyl-gamma-glutamyl-phosphate reductase | - |
| LNP19_RS13590 (LNP19_13590) | 3133828..3134967 | + | 1140 | WP_230062437.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| LNP19_RS13595 (LNP19_13595) | 3135084..3136280 | + | 1197 | WP_230062438.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LNP19_RS13600 (LNP19_13600) | 3136479..3137240 | + | 762 | WP_230062439.1 | glutamate 5-kinase | - |
| LNP19_RS13605 (LNP19_13605) | 3137335..3138327 | + | 993 | WP_230062440.1 | N-acetylornithine carbamoyltransferase | - |
| LNP19_RS13610 (LNP19_13610) | 3138328..3139131 | + | 804 | WP_230062441.1 | acetylglutamate kinase | - |
| LNP19_RS13615 (LNP19_13615) | 3139220..3140290 | + | 1071 | WP_230062442.1 | M20 family metallo-hydrolase | - |
| LNP19_RS13620 (LNP19_13620) | 3140411..3141691 | + | 1281 | WP_230062443.1 | argininosuccinate lyase | - |
| LNP19_RS13625 (LNP19_13625) | 3141762..3142151 | - | 390 | WP_230062444.1 | bacillithiol system redox-active protein YtxJ | - |
| LNP19_RS13630 (LNP19_13630) | 3142295..3144898 | + | 2604 | WP_230062445.1 | ATP-dependent chaperone ClpB | - |
| LNP19_RS13635 (LNP19_13635) | 3145105..3145992 | + | 888 | WP_230062446.1 | carbon-nitrogen hydrolase | - |
| LNP19_RS13640 (LNP19_13640) | 3146067..3147590 | - | 1524 | WP_230062447.1 | choice-of-anchor I family protein | - |
| LNP19_RS13645 (LNP19_13645) | 3147786..3148826 | + | 1041 | WP_230062448.1 | agmatine deiminase family protein | - |
| LNP19_RS13650 (LNP19_13650) | 3148904..3151177 | - | 2274 | WP_230062449.1 | M1 family metallopeptidase | - |
| LNP19_RS13655 (LNP19_13655) | 3151365..3151646 | - | 282 | WP_230062450.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|