MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 131853 bp
Accession: NZ_CP087114 Location: 2004136..2135988 Organism: Bartonella machadoae strain 46A Replicon: chromosome
Accession: NZ_CP087114 Location: 2004136..2135988 Organism: Bartonella machadoae strain 46A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LNM86_RS09415 (LNM86_09415) | 1999242..1999445 | - | 204 | WP_241437471.1 | NepR family anti-sigma factor | - |
| LNM86_RS09420 (LNM86_09420) | 1999612..2000406 | + | 795 | WP_241437472.1 | response regulator | - |
| LNM86_RS09425 (LNM86_09425) | 2000427..2001443 | + | 1017 | WP_241437473.1 | PAS domain-containing sensor histidine kinase | - |
| LNM86_RS09430 (LNM86_09430) | 2001576..2002370 | - | 795 | WP_241437474.1 | hypothetical protein | - |
| LNM86_RS09435 (LNM86_09435) | 2002409..2002771 | + | 363 | WP_241437475.1 | hypothetical protein | - |
| LNM86_RS09440 (LNM86_09440) | 2002819..2003271 | + | 453 | WP_241437476.1 | hypothetical protein | - |
| LNM86_RS09445 (LNM86_09445) | 2003811..2004007 | + | 197 | Protein_1846 | Arm DNA-binding domain-containing protein | - |
| LNM86_RS09450 (LNM86_09450) | 2004267..2004509 | - | 243 | WP_241437477.1 | hypothetical protein | - |
| LNM86_RS09455 (LNM86_09455) | 2004807..2008777 | - | 3971 | Protein_1848 | hypothetical protein | VF |
| LNM86_RS09460 (LNM86_09460) | 2009564..2009815 | + | 252 | WP_241437478.1 | hypothetical protein | - |
| LNM86_RS09465 (LNM86_09465) | 2010375..2010491 | - | 117 | Protein_1850 | DUF4167 domain-containing protein | - |
| LNM86_RS09470 (LNM86_09470) | 2010617..2011384 | - | 768 | WP_241437479.1 | DUF4167 domain-containing protein | - |
| LNM86_RS09475 (LNM86_09475) | 2012236..2013168 | + | 933 | WP_241437480.1 | formate dehydrogenase accessory protein FdhE | - |
| LNM86_RS09480 (LNM86_09480) | 2013617..2014787 | + | 1171 | Protein_1853 | tyrosine-type recombinase/integrase | - |
| LNM86_RS09485 (LNM86_09485) | 2014893..2015336 | - | 444 | WP_241437481.1 | hypothetical protein | - |
| LNM86_RS09490 (LNM86_09490) | 2015491..2015745 | - | 255 | WP_241437482.1 | hypothetical protein | - |
| LNM86_RS09495 (LNM86_09495) | 2016790..2017083 | - | 294 | WP_241437483.1 | hypothetical protein | - |
| LNM86_RS09500 (LNM86_09500) | 2017271..2018059 | - | 789 | WP_241437484.1 | phage tail protein | - |
| LNM86_RS09505 (LNM86_09505) | 2018056..2019180 | - | 1125 | WP_241437485.1 | tail fiber domain-containing protein | - |
| LNM86_RS09510 (LNM86_09510) | 2019177..2019635 | - | 459 | WP_241437486.1 | hypothetical protein | - |
| LNM86_RS09515 (LNM86_09515) | 2020336..2020515 | - | 180 | WP_241439048.1 | hypothetical protein | - |
| LNM86_RS09520 (LNM86_09520) | 2020984..2022447 | - | 1464 | WP_241437487.1 | hypothetical protein | - |
| LNM86_RS09525 (LNM86_09525) | 2022914..2023618 | - | 705 | WP_241437488.1 | hypothetical protein | - |
| LNM86_RS09530 (LNM86_09530) | 2023739..2024857 | - | 1119 | WP_241438978.1 | N4-gp56 family major capsid protein | - |
| LNM86_RS09535 (LNM86_09535) | 2025400..2026239 | - | 840 | WP_241437489.1 | hypothetical protein | - |
| LNM86_RS09540 (LNM86_09540) | 2026566..2028413 | - | 1848 | WP_241437490.1 | portal protein | - |
| LNM86_RS09545 (LNM86_09545) | 2028414..2029739 | - | 1326 | WP_241437491.1 | phage terminase large subunit | - |
| LNM86_RS09550 (LNM86_09550) | 2030167..2030493 | - | 327 | WP_241438980.1 | hypothetical protein | - |
| LNM86_RS09555 (LNM86_09555) | 2032103..2032345 | - | 243 | WP_241437492.1 | hypothetical protein | - |
| LNM86_RS12770 | 2032840..2032974 | - | 135 | WP_256460927.1 | hypothetical protein | - |
| LNM86_RS09560 (LNM86_09560) | 2032919..2033267 | - | 349 | Protein_1870 | hypothetical protein | - |
| LNM86_RS09565 (LNM86_09565) | 2033466..2034632 | + | 1167 | WP_241437374.1 | hypothetical protein ; Integrase | Integrase |
| LNM86_RS09570 (LNM86_09570) | 2034852..2035058 | + | 207 | WP_241437493.1 | DNA-binding protein | - |
| LNM86_RS09575 (LNM86_09575) | 2035159..2035498 | + | 340 | Protein_1873 | virulence-associated protein E | - |
| LNM86_RS09580 (LNM86_09580) | 2035571..2037187 | + | 1617 | WP_241437372.1 | YfjI family protein | - |
| LNM86_RS09585 (LNM86_09585) | 2037789..2042750 | + | 4962 | WP_241437494.1 | DEAD/DEAH box helicase family protein | - |
| LNM86_RS09590 (LNM86_09590) | 2044160..2044945 | + | 786 | WP_241437495.1 | hypothetical protein | - |
| LNM86_RS09595 (LNM86_09595) | 2045028..2045525 | + | 498 | WP_241437496.1 | hypothetical protein | - |
| LNM86_RS09600 (LNM86_09600) | 2045618..2046418 | + | 801 | WP_241437497.1 | hypothetical protein | - |
| LNM86_RS09605 (LNM86_09605) | 2046492..2046989 | + | 498 | WP_241437498.1 | hypothetical protein | - |
| LNM86_RS09610 (LNM86_09610) | 2047066..2047845 | + | 780 | WP_241438981.1 | hypothetical protein | - |
| LNM86_RS09615 (LNM86_09615) | 2049484..2049855 | + | 372 | WP_241437499.1 | helix-turn-helix transcriptional regulator | - |
| LNM86_RS09620 (LNM86_09620) | 2050486..2050836 | + | 351 | Protein_1882 | helix-turn-helix domain-containing protein | - |
| LNM86_RS09625 (LNM86_09625) | 2051114..2051485 | + | 372 | WP_241437500.1 | helix-turn-helix transcriptional regulator | - |
| LNM86_RS09630 (LNM86_09630) | 2052106..2052477 | + | 372 | WP_241437501.1 | helix-turn-helix transcriptional regulator | - |
| LNM86_RS09635 (LNM86_09635) | 2053012..2055591 | - | 2580 | WP_241437502.1 | hypothetical protein | VF |
| LNM86_RS09640 (LNM86_09640) | 2056308..2057324 | + | 1017 | WP_241437503.1 | hypothetical protein | - |
| LNM86_RS09645 (LNM86_09645) | 2057321..2057668 | - | 348 | WP_241437504.1 | hypothetical protein | - |
| LNM86_RS09650 (LNM86_09650) | 2058177..2058470 | + | 294 | WP_241437505.1 | hypothetical protein | - |
| LNM86_RS09655 (LNM86_09655) | 2058492..2059202 | + | 711 | Protein_1889 | hypothetical protein | - |
| LNM86_RS09660 (LNM86_09660) | 2060016..2060237 | - | 222 | WP_241437506.1 | DNA gyrase inhibitor YacG | - |
| LNM86_RS09665 (LNM86_09665) | 2060324..2061046 | - | 723 | WP_241437507.1 | Maf family nucleotide pyrophosphatase | - |
| LNM86_RS09670 (LNM86_09670) | 2061274..2061432 | - | 159 | WP_241437508.1 | translation initiation factor IF-1 | - |
| LNM86_RS09675 (LNM86_09675) | 2062488..2062709 | + | 222 | WP_241437509.1 | hypothetical protein | - |
| LNM86_RS09680 (LNM86_09680) | 2062920..2063141 | + | 222 | WP_241437509.1 | hypothetical protein | - |
| LNM86_RS09685 (LNM86_09685) | 2063984..2064193 | - | 210 | WP_241437510.1 | hypothetical protein | - |
| LNM86_RS09690 (LNM86_09690) | 2064265..2064999 | - | 735 | Protein_1896 | nuclease | - |
| LNM86_RS09695 (LNM86_09695) | 2065123..2065470 | + | 348 | WP_241437511.1 | hypothetical protein | VF |
| LNM86_RS09700 (LNM86_09700) | 2065493..2065819 | + | 327 | WP_241437512.1 | hypothetical protein | VF |
| LNM86_RS09705 (LNM86_09705) | 2065816..2066427 | + | 612 | Protein_1899 | hypothetical protein | VF |
| LNM86_RS09710 (LNM86_09710) | 2066603..2067769 | + | 1167 | WP_241437513.1 | hypothetical protein ; Integrase | Integrase |
| LNM86_RS09715 (LNM86_09715) | 2067988..2068194 | + | 207 | WP_241437301.1 | DNA-binding protein | - |
| LNM86_RS09720 (LNM86_09720) | 2068294..2069191 | + | 898 | Protein_1902 | toprim domain-containing protein | - |
| LNM86_RS09725 (LNM86_09725) | 2069196..2070797 | + | 1602 | WP_241437514.1 | YfjI family protein | - |
| LNM86_RS09730 (LNM86_09730) | 2071369..2076357 | + | 4989 | WP_241437515.1 | DEAD/DEAH box helicase family protein | - |
| LNM86_RS09735 (LNM86_09735) | 2077756..2078472 | + | 717 | WP_241437516.1 | hypothetical protein | - |
| LNM86_RS09740 (LNM86_09740) | 2078553..2079236 | + | 684 | WP_241437517.1 | hypothetical protein | - |
| LNM86_RS09745 (LNM86_09745) | 2079309..2079806 | + | 498 | WP_241437518.1 | hypothetical protein | - |
| LNM86_RS09750 (LNM86_09750) | 2079883..2080662 | + | 780 | WP_241438981.1 | hypothetical protein | - |
| LNM86_RS09755 (LNM86_09755) | 2081566..2083320 | + | 1755 | Protein_1909 | hypothetical protein | VF |
| LNM86_RS09760 (LNM86_09760) | 2083317..2083727 | + | 411 | WP_256460909.1 | type IV secretion system protein | - |
| LNM86_RS09765 (LNM86_09765) | 2084582..2085361 | - | 780 | WP_241438967.1 | hypothetical protein | - |
| LNM86_RS09770 (LNM86_09770) | 2085438..2085935 | - | 498 | WP_241437519.1 | hypothetical protein | - |
| LNM86_RS09775 (LNM86_09775) | 2086005..2086805 | - | 801 | WP_241437520.1 | hypothetical protein | - |
| LNM86_RS09780 (LNM86_09780) | 2086889..2087572 | - | 684 | WP_241437521.1 | hypothetical protein | - |
| LNM86_RS09785 (LNM86_09785) | 2087659..2088387 | - | 729 | WP_241437522.1 | hypothetical protein | - |
| LNM86_RS09790 (LNM86_09790) | 2089833..2094821 | - | 4989 | WP_241437523.1 | DEAD/DEAH box helicase family protein | - |
| LNM86_RS09795 (LNM86_09795) | 2095393..2096532 | - | 1140 | WP_241437524.1 | DUF3987 domain-containing protein | - |
| LNM86_RS09800 (LNM86_09800) | 2096505..2096867 | - | 363 | Protein_1918 | YfjI family protein | - |
| LNM86_RS09805 (LNM86_09805) | 2096981..2097633 | - | 653 | Protein_1919 | hypothetical protein | - |
| LNM86_RS09810 (LNM86_09810) | 2097734..2097940 | - | 207 | WP_241437301.1 | DNA-binding protein | - |
| LNM86_RS09815 (LNM86_09815) | 2098159..2099325 | - | 1167 | WP_241437525.1 | hypothetical protein ; Integrase | Integrase |
| LNM86_RS09820 (LNM86_09820) | 2099502..2099909 | + | 408 | Protein_1922 | type IV secretion protein VblB5 | - |
| LNM86_RS09825 (LNM86_09825) | 2099933..2100199 | + | 267 | WP_241437526.1 | EexN family lipoprotein | - |
| LNM86_RS09830 (LNM86_09830) | 2100202..2100552 | + | 351 | WP_241437527.1 | EexN family lipoprotein | - |
| LNM86_RS09835 (LNM86_09835) | 2100686..2101087 | + | 402 | WP_241437528.1 | EexN family lipoprotein | - |
| LNM86_RS09840 (LNM86_09840) | 2101090..2101362 | + | 273 | WP_241437529.1 | EexN family lipoprotein | - |
| LNM86_RS09845 (LNM86_09845) | 2101501..2101896 | + | 396 | WP_241437530.1 | EexN family lipoprotein | - |
| LNM86_RS09850 (LNM86_09850) | 2101940..2102866 | + | 927 | WP_241437531.1 | hypothetical protein | VF |
| LNM86_RS09855 (LNM86_09855) | 2102884..2103177 | + | 294 | WP_241437532.1 | type IV secretion protein VblB7 | - |
| LNM86_RS09860 (LNM86_09860) | 2103174..2103845 | + | 672 | WP_241437533.1 | hypothetical protein | VF |
| LNM86_RS09865 (LNM86_09865) | 2103849..2104700 | + | 852 | WP_241437534.1 | hypothetical protein | VF |
| LNM86_RS09870 (LNM86_09870) | 2104851..2106059 | + | 1209 | WP_241437535.1 | hypothetical protein | VF |
| LNM86_RS09875 (LNM86_09875) | 2106087..2107139 | + | 1053 | WP_241437536.1 | hypothetical protein | VF |
| LNM86_RS09880 (LNM86_09880) | 2107192..2107454 | + | 263 | Protein_1934 | hypothetical protein | VF |
| LNM86_RS09885 (LNM86_09885) | 2107507..2107770 | + | 264 | Protein_1935 | hypothetical protein | VF |
| LNM86_RS09890 (LNM86_09890) | 2107823..2108086 | + | 264 | Protein_1936 | hypothetical protein | VF |
| LNM86_RS09895 (LNM86_09895) | 2108139..2108402 | + | 264 | Protein_1937 | hypothetical protein | VF |
| LNM86_RS09900 (LNM86_09900) | 2108415..2108489 | - | 75 | WP_241438983.1 | type II toxin-antitoxin system YafQ family toxin | - |
| LNM86_RS09905 (LNM86_09905) | 2108657..2108956 | - | 300 | WP_241437537.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| LNM86_RS09910 (LNM86_09910) | 2109033..2109707 | - | 675 | WP_241437538.1 | BID domain-containing protein | - |
| LNM86_RS09915 (LNM86_09915) | 2109796..2110548 | - | 753 | WP_241437539.1 | Fic family protein | Toxin Detail |
| LNM86_RS09920 (LNM86_09920) | 2110535..2110723 | - | 189 | WP_241437540.1 | antitoxin VbhA family protein | Antitoxin Detail |
| LNM86_RS09925 (LNM86_09925) | 2110736..2111050 | - | 315 | WP_241437541.1 | helix-turn-helix domain-containing protein | - |
| LNM86_RS09930 (LNM86_09930) | 2111254..2114952 | - | 3699 | WP_241437542.1 | Ti-type conjugative transfer relaxase TraA | - |
| LNM86_RS09935 (LNM86_09935) | 2115160..2115390 | + | 231 | WP_241437543.1 | TraC family protein | - |
| LNM86_RS09940 (LNM86_09940) | 2115443..2115649 | + | 207 | WP_241437544.1 | conjugal transfer protein TraD | - |
| LNM86_RS09945 (LNM86_09945) | 2115646..2117562 | + | 1917 | WP_241437545.1 | hypothetical protein | VF |
| LNM86_RS09950 (LNM86_09950) | 2117916..2118152 | - | 237 | WP_241437546.1 | hypothetical protein | - |
| LNM86_RS09955 (LNM86_09955) | 2118372..2118692 | - | 321 | WP_241437547.1 | helix-turn-helix transcriptional regulator | - |
| LNM86_RS09960 (LNM86_09960) | 2118695..2119045 | - | 351 | WP_241437548.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LNM86_RS09965 (LNM86_09965) | 2119174..2119860 | - | 687 | WP_241437549.1 | hypothetical protein | - |
| LNM86_RS09970 (LNM86_09970) | 2120474..2125438 | - | 4965 | WP_241437550.1 | DEAD/DEAH box helicase family protein | - |
| LNM86_RS09975 (LNM86_09975) | 2126245..2126697 | - | 453 | WP_241437551.1 | hypothetical protein | - |
| LNM86_RS09980 (LNM86_09980) | 2126783..2127088 | - | 306 | WP_241437552.1 | hypothetical protein | - |
| LNM86_RS09985 (LNM86_09985) | 2127149..2127790 | - | 642 | WP_241437553.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LNM86_RS09990 (LNM86_09990) | 2128218..2128574 | + | 357 | WP_241437554.1 | helix-turn-helix transcriptional regulator | - |
| LNM86_RS09995 (LNM86_09995) | 2130159..2130740 | - | 582 | WP_241437555.1 | disulfide bond formation protein B | - |
| LNM86_RS10000 (LNM86_10000) | 2130751..2130903 | - | 153 | WP_241438984.1 | DUF5993 family protein | - |
| LNM86_RS10005 (LNM86_10005) | 2131302..2131772 | + | 471 | WP_241437556.1 | hypothetical protein | - |
| LNM86_RS10010 (LNM86_10010) | 2132346..2132843 | + | 498 | WP_241437557.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| LNM86_RS10015 (LNM86_10015) | 2132859..2133365 | - | 507 | WP_241437558.1 | hypothetical protein | - |
| LNM86_RS10020 (LNM86_10020) | 2133379..2134458 | + | 1080 | WP_256460910.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| LNM86_RS10025 (LNM86_10025) | 2136537..2136662 | + | 126 | WP_220717794.1 | type B 50S ribosomal protein L36 | - |
| LNM86_RS10030 (LNM86_10030) | 2136797..2137594 | + | 798 | WP_241438986.1 | hypothetical protein | - |
| LNM86_RS10035 (LNM86_10035) | 2137755..2137956 | + | 202 | Protein_1965 | hypothetical protein | - |
| LNM86_RS10045 (LNM86_10045) | 2138940..2139542 | + | 603 | WP_241437559.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| LNM86_RS10050 (LNM86_10050) | 2139561..2140382 | + | 822 | WP_241437560.1 | TIGR00282 family metallophosphoesterase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|