MGE detailed information
MGE type: Genomic_island MGE length: 18262 bp
Accession: NZ_CP087111 Location: 1276498..1294759 Organism: Pseudomonas palleroniana strain X49 Replicon: chromosome
Accession: NZ_CP087111 Location: 1276498..1294759 Organism: Pseudomonas palleroniana strain X49 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDL65_RS05940 (LDL65_05940) | 1272366..1272704 | - | 339 | WP_003175975.1 | preprotein translocase subunit YajC | - |
| LDL65_RS05945 (LDL65_05945) | 1272748..1273863 | - | 1116 | WP_199777945.1 | tRNA guanosine(34) transglycosylase Tgt | - |
| LDL65_RS05950 (LDL65_05950) | 1273869..1274933 | - | 1065 | WP_244700480.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| LDL65_RS05960 (LDL65_05960) | 1275374..1276501 | + | 1128 | WP_244700483.1 | AAA family ATPase | - |
| LDL65_RS05965 (LDL65_05965) | 1276498..1277172 | + | 675 | WP_280518019.1 | DUF4276 family protein | - |
| LDL65_RS05970 (LDL65_05970) | 1277476..1277808 | + | 333 | WP_244700487.1 | IS66 family transposase ISPpu19 | Transposase |
| LDL65_RS05975 (LDL65_05975) | 1277805..1278140 | + | 336 | WP_244700489.1 | IS66 family transposase ISPpu14 | Transposase |
| LDL65_RS05980 (LDL65_05980) | 1278202..1279638 | + | 1437 | WP_244700491.1 | IS66 family transposase ISSal1 | Transposase |
| LDL65_RS05985 (LDL65_05985) | 1279669..1280307 | + | 639 | WP_244700493.1 | DUF2625 domain-containing protein | - |
| LDL65_RS05990 (LDL65_05990) | 1280497..1281003 | - | 507 | WP_244700496.1 | hypothetical protein | - |
| LDL65_RS05995 (LDL65_05995) | 1281377..1282009 | - | 633 | WP_244700499.1 | hypothetical protein | - |
| LDL65_RS06000 (LDL65_06000) | 1282064..1282183 | - | 120 | Protein_1172 | gamma-glutamylcyclotransferase | - |
| LDL65_RS06005 (LDL65_06005) | 1282480..1282788 | - | 309 | WP_244700502.1 | DUF3077 domain-containing protein | - |
| LDL65_RS06010 (LDL65_06010) | 1284397..1284591 | - | 195 | WP_158510690.1 | hypothetical protein | - |
| LDL65_RS06015 (LDL65_06015) | 1284588..1286645 | - | 2058 | WP_244700505.1 | FUSC family protein | - |
| LDL65_RS06020 (LDL65_06020) | 1286645..1287547 | - | 903 | WP_090368689.1 | HlyD family secretion protein | - |
| LDL65_RS06025 (LDL65_06025) | 1287559..1287747 | - | 189 | WP_060754331.1 | DUF1656 domain-containing protein | - |
| LDL65_RS06030 (LDL65_06030) | 1287890..1288690 | + | 801 | WP_060754332.1 | HTH-type transcriptional activator RhaR | VF |
| LDL65_RS06035 (LDL65_06035) | 1288804..1289184 | + | 381 | WP_060754333.1 | cupin domain-containing protein | - |
| LDL65_RS06040 (LDL65_06040) | 1289374..1289703 | + | 330 | WP_244700507.1 | hypothetical protein | - |
| LDL65_RS06045 (LDL65_06045) | 1289728..1290363 | - | 636 | WP_244700509.1 | LysE family translocator | - |
| LDL65_RS06050 (LDL65_06050) | 1290531..1290902 | + | 372 | WP_244700511.1 | PH domain-containing protein | - |
| LDL65_RS06055 (LDL65_06055) | 1291024..1291518 | + | 495 | WP_244700513.1 | hypothetical protein | - |
| LDL65_RS06060 (LDL65_06060) | 1291589..1292164 | - | 576 | WP_244700515.1 | PIN domain-containing protein | Toxin Detail |
| LDL65_RS06065 (LDL65_06065) | 1292161..1292631 | - | 471 | WP_244700517.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| LDL65_RS06070 (LDL65_06070) | 1292828..1293991 | + | 1164 | WP_161550064.1 | S-type pyocin domain-containing protein | - |
| LDL65_RS06075 (LDL65_06075) | 1294006..1294293 | + | 288 | WP_161550063.1 | colicin E3-like toxin immunity protein | - |
| LDL65_RS06080 (LDL65_06080) | 1294298..1294759 | + | 462 | WP_244700518.1 | hypothetical protein | - |
| LDL65_RS06085 (LDL65_06085) | 1294887..1296239 | - | 1353 | WP_161550061.1 | sensor histidine kinase | - |
| LDL65_RS06090 (LDL65_06090) | 1296236..1296898 | - | 663 | WP_060754342.1 | response regulator | - |
| LDL65_RS06095 (LDL65_06095) | 1297046..1297312 | + | 267 | WP_060754343.1 | PepSY domain-containing protein | - |
| LDL65_RS06100 (LDL65_06100) | 1297314..1297859 | + | 546 | WP_244700521.1 | cytochrome b/b6 domain-containing protein | - |
| LDL65_RS06105 (LDL65_06105) | 1297880..1299148 | + | 1269 | WP_060754345.1 | sialidase family protein | - |
| LDL65_RS06110 (LDL65_06110) | 1299148..1299759 | + | 612 | WP_244700523.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|