MGE detailed information
MGE type: Genomic_island MGE length: 19253 bp
Accession: NZ_CP087110 Location: 3880847..3900099 Organism: Escherichia coli strain PJ-T13 Replicon: chromosome
Accession: NZ_CP087110 Location: 3880847..3900099 Organism: Escherichia coli strain PJ-T13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LM520_RS19015 (3876326) | 3876326..3876829 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| LM520_RS19020 (3876842) | 3876842..3877372 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| LM520_RS19025 (3877382) | 3877382..3880018 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| LM520_RS19030 (3880085) | 3880085..3880810 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| LM520_RS19035 (3880847) | 3880847..3881386 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| LM520_RS19040 (3881451) | 3881451..3881999 | - | 549 | WP_000695564.1 | hypothetical protein | VF |
| LM520_RS19045 (3882481) | 3882481..3883077 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| LM520_RS19050 (3883555) | 3883555..3884157 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| LM520_RS19055 (3885613) | 3885613..3886329 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LM520_RS19060 (3886349) | 3886349..3887455 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| LM520_RS19065 (3887520) | 3887520..3888500 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| LM520_RS19070 (3888610) | 3888610..3888815 | + | 206 | Protein_3733 | HNH endonuclease | - |
| LM520_RS19075 (3889083) | 3889083..3890323 | - | 1241 | Protein_3734 | helicase YjhR | - |
| LM520_RS19080 (3890439) | 3890439..3890570 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| LM520_RS19085 (3891061) | 3891061..3891318 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| LM520_RS19090 (3891330) | 3891330..3891875 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| LM520_RS19095 (3891931) | 3891931..3892677 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| LM520_RS19100 (3892846) | 3892846..3893064 | + | 219 | Protein_3739 | hypothetical protein | - |
| LM520_RS19105 (3893102) | 3893102..3893218 | + | 117 | Protein_3740 | VOC family protein | - |
| LM520_RS19110 (3893463) | 3893463..3894584 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| LM520_RS19115 (3894581) | 3894581..3894859 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| LM520_RS19120 (3894871) | 3894871..3896184 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| LM520_RS19125 (3896197) | 3896197..3897003 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| LM520_RS19130 (3897134) | 3897134..3897565 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| LM520_RS19135 (3897577) | 3897577..3898209 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| LM520_RS19140 (3898226) | 3898226..3899008 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LM520_RS19145 (3899311) | 3899311..3900099 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| LM520_RS19150 (3900104) | 3900104..3901009 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| LM520_RS19155 (3901020) | 3901020..3902987 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| LM520_RS19160 (3903094) | 3903094..3904443 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|