MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82230 bp
Accession: NZ_CP087071 Location: 1..82230 Organism: Pseudosulfitobacter pseudonitzschiae strain MC36-22 Replicon: plasmid P5
Accession: NZ_CP087071 Location: 1..82230 Organism: Pseudosulfitobacter pseudonitzschiae strain MC36-22 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE34_RS22500 (LOE34_22495) | 1223..1786 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE34_RS22505 (LOE34_22500) | 2074..2661 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE34_RS22510 (LOE34_22505) | 2819..4273 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE34_RS22515 (LOE34_22510) | 4315..5640 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE34_RS22520 (LOE34_22515) | 5637..6332 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE34_RS22525 (LOE34_22520) | 6325..7575 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE34_RS22530 (LOE34_22525) | 7766..8386 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE34_RS22535 (LOE34_22530) | 8398..10470 | + | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE34_RS22540 (LOE34_22535) | 10569..11549 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE34_RS22545 (LOE34_22540) | 11546..12748 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE34_RS22550 (LOE34_22545) | 13374..14384 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE34_RS22555 (LOE34_22550) | 14521..15957 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE34_RS22560 (LOE34_22555) | 15954..17543 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE34_RS22565 (LOE34_22560) | 18118..18873 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE34_RS22570 (LOE34_22565) | 18986..19693 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE34_RS22575 (LOE34_22570) | 19690..20376 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE34_RS22580 (LOE34_22575) | 20585..22420 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE34_RS22585 (LOE34_22580) | 22589..24112 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE34_RS22590 (LOE34_22585) | 24242..25198 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE34_RS22595 (LOE34_22590) | 25607..26473 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE34_RS22600 (LOE34_22595) | 26485..26787 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE34_RS22605 (LOE34_22600) | 26877..27809 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE34_RS22610 (LOE34_22605) | 27978..29042 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE34_RS22615 (LOE34_22610) | 29124..30644 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE34_RS22620 (LOE34_22615) | 30657..31853 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE34_RS22625 (LOE34_22620) | 31866..33608 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE34_RS22630 (LOE34_22625) | 33608..34534 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE34_RS22635 (LOE34_22630) | 34571..35488 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE34_RS22640 (LOE34_22635) | 35577..36137 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE34_RS22645 (LOE34_22640) | 36134..37189 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE34_RS22650 (LOE34_22645) | 37186..38064 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE34_RS22655 (LOE34_22650) | 38355..39050 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE34_RS22660 (LOE34_22655) | 39249..40427 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE34_RS22665 (LOE34_22660) | 40427..41743 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE34_RS22670 (LOE34_22665) | 41760..43307 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE34_RS22675 (LOE34_22670) | 43399..44169 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE34_RS22680 (LOE34_22675) | 44638..44913 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE34_RS22685 (LOE34_22680) | 44906..45199 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE34_RS22690 (LOE34_22685) | 45270..46175 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE34_RS22695 (LOE34_22690) | 46186..47925 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE34_RS22700 (LOE34_22695) | 48187..49722 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE34_RS22705 (LOE34_22700) | 49728..50702 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE34_RS22710 (LOE34_22705) | 50766..51980 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE34_RS22715 (LOE34_22710) | 52082..52720 | - | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE34_RS22720 (LOE34_22715) | 52780..53208 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE34_RS22725 (LOE34_22720) | 53439..54368 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE34_RS22730 (LOE34_22725) | 54355..54660 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE34_RS22735 (LOE34_22730) | 54789..55022 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE34_RS22740 (LOE34_22735) | 55361..56179 | + | 819 | Protein_49 | GTP-binding protein | - |
| LOE34_RS22745 (LOE34_22740) | 56258..56846 | - | 589 | Protein_50 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE34_RS22750 (LOE34_22745) | 57013..59901 | + | 2889 | Protein_51 | Tn3 family transposase | - |
| LOE34_RS22755 (LOE34_22750) | 59977..61119 | + | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE34_RS22760 (LOE34_22755) | 61116..62045 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE34_RS22765 (LOE34_22760) | 62089..62853 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE34_RS22770 (LOE34_22765) | 62850..64298 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE34_RS22775 (LOE34_22770) | 64329..64646 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE34_RS22780 (LOE34_22775) | 64656..65372 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE34_RS22785 (LOE34_22780) | 65388..66083 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE34_RS22790 (LOE34_22785) | 66076..66861 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE34_RS22795 (LOE34_22790) | 66858..67610 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE34_RS22800 (LOE34_22795) | 67877..68839 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE34_RS22805 (LOE34_22800) | 68925..70799 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE34_RS22810 (LOE34_22805) | 70821..72506 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE34_RS22815 (LOE34_22810) | 72532..73974 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE34_RS22820 (LOE34_22815) | 73998..74627 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE34_RS22825 (LOE34_22820) | 75043..76716 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE34_RS22830 (LOE34_22825) | 76725..77432 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE34_RS22835 (LOE34_22830) | 77571..80297 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE34_RS22840 (LOE34_22835) | 80267..81313 | - | 1047 | WP_081855458.1 | serine protease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|