MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82447 bp
Accession: NZ_CP087065 Location: 1..82447 Organism: Pseudosulfitobacter pseudonitzschiae strain MC36-24 Replicon: plasmid P6
Accession: NZ_CP087065 Location: 1..82447 Organism: Pseudosulfitobacter pseudonitzschiae strain MC36-24 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE35_RS23365 (LOE35_23380) | 473..1225 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE35_RS23370 (LOE35_23385) | 1492..2454 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE35_RS23375 (LOE35_23390) | 2540..4414 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE35_RS23380 (LOE35_23395) | 4436..6121 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE35_RS23385 (LOE35_23400) | 6147..7589 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE35_RS23390 (LOE35_23405) | 7613..8242 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE35_RS23395 (LOE35_23410) | 8658..10331 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE35_RS23400 (LOE35_23415) | 10340..11047 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE35_RS23405 (LOE35_23420) | 11186..13912 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE35_RS23410 (LOE35_23425) | 13882..14928 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE35_RS23415 (LOE35_23430) | 14934..16907 | - | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE35_RS23420 (LOE35_23435) | 17068..17631 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE35_RS23425 (LOE35_23440) | 17919..18506 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE35_RS23430 (LOE35_23445) | 18664..20118 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE35_RS23435 (LOE35_23450) | 20160..21485 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE35_RS23440 (LOE35_23455) | 21482..22177 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE35_RS23445 (LOE35_23460) | 22170..23420 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE35_RS23450 (LOE35_23465) | 23611..24231 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE35_RS23455 (LOE35_23470) | 24243..26315 | + | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE35_RS23460 (LOE35_23475) | 26414..27394 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE35_RS23465 (LOE35_23480) | 27391..28593 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE35_RS23470 (LOE35_23485) | 29219..30229 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE35_RS23475 (LOE35_23490) | 30366..31802 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE35_RS23480 (LOE35_23495) | 31799..33388 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE35_RS23485 (LOE35_23500) | 33963..34718 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE35_RS23490 (LOE35_23505) | 34831..35538 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE35_RS23495 (LOE35_23510) | 35535..36221 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE35_RS23500 (LOE35_23515) | 36430..38265 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE35_RS23505 (LOE35_23520) | 38434..39957 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE35_RS23510 (LOE35_23525) | 40087..41043 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE35_RS23515 (LOE35_23530) | 41452..42318 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE35_RS23520 (LOE35_23535) | 42330..42632 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE35_RS23525 (LOE35_23540) | 42722..43654 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE35_RS23530 (LOE35_23545) | 43823..44887 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE35_RS23535 (LOE35_23550) | 44969..46489 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE35_RS23540 (LOE35_23555) | 46502..47698 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE35_RS23545 (LOE35_23560) | 47711..49453 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE35_RS23550 (LOE35_23565) | 49453..50379 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE35_RS23555 (LOE35_23570) | 50416..51333 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE35_RS23560 (LOE35_23575) | 51422..51982 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE35_RS23565 (LOE35_23580) | 51979..53034 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE35_RS23570 (LOE35_23585) | 53031..53909 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE35_RS23575 (LOE35_23590) | 54200..54895 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE35_RS23580 (LOE35_23595) | 55094..56272 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE35_RS23585 (LOE35_23600) | 56272..57588 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE35_RS23590 (LOE35_23605) | 57605..59152 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE35_RS23595 (LOE35_23610) | 59244..60014 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE35_RS23600 (LOE35_23615) | 60483..60758 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE35_RS23605 (LOE35_23620) | 60751..61044 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE35_RS23610 (LOE35_23625) | 61115..62020 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE35_RS23615 (LOE35_23630) | 62031..63770 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE35_RS23620 (LOE35_23635) | 64032..65567 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE35_RS23625 (LOE35_23640) | 65573..66547 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE35_RS23630 (LOE35_23645) | 66611..67825 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE35_RS23635 (LOE35_23650) | 67927..68565 | - | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE35_RS23640 (LOE35_23655) | 68625..69053 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE35_RS23645 (LOE35_23660) | 69284..70213 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE35_RS23650 (LOE35_23665) | 70200..70505 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE35_RS23655 (LOE35_23670) | 70634..70867 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE35_RS23660 (LOE35_23675) | 71206..72024 | + | 819 | Protein_60 | GTP-binding protein | - |
| LOE35_RS23665 (LOE35_23680) | 72103..72690 | - | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE35_RS23670 (LOE35_23685) | 72856..75745 | + | 2890 | Protein_62 | Tn3 family transposase | - |
| LOE35_RS23675 (LOE35_23690) | 75821..76963 | + | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE35_RS23680 (LOE35_23695) | 76960..77889 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE35_RS23685 (LOE35_23700) | 77933..78697 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE35_RS23690 (LOE35_23705) | 78694..80142 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE35_RS23695 (LOE35_23710) | 80173..80490 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE35_RS23700 (LOE35_23715) | 80500..81216 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE35_RS23705 (LOE35_23720) | 81232..81927 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE35_RS23710 (LOE35_23725) | 81920..82438 | - | 519 | WP_229945726.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|