MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82230 bp
Accession: NZ_CP087050 Location: 1..82230 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-18 Replicon: plasmid P8
Accession: NZ_CP087050 Location: 1..82230 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-18 Replicon: plasmid P8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE42_RS24145 (LOE42_24140) | 60..1799 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE42_RS24150 (LOE42_24145) | 1810..2715 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE42_RS24155 (LOE42_24150) | 2786..3079 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE42_RS24160 (LOE42_24155) | 3072..3347 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE42_RS24165 (LOE42_24160) | 3816..4586 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE42_RS24170 (LOE42_24165) | 4678..6225 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE42_RS24175 (LOE42_24170) | 6242..7558 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE42_RS24180 (LOE42_24175) | 7558..8736 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE42_RS24185 (LOE42_24180) | 8935..9630 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE42_RS24190 (LOE42_24185) | 9921..10799 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE42_RS24195 (LOE42_24190) | 10796..11851 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE42_RS24200 (LOE42_24195) | 11848..12408 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE42_RS24205 (LOE42_24200) | 12497..13414 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE42_RS24210 (LOE42_24205) | 13451..14377 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE42_RS24215 (LOE42_24210) | 14377..16119 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE42_RS24220 (LOE42_24215) | 16132..17328 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE42_RS24225 (LOE42_24220) | 17341..18861 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE42_RS24230 (LOE42_24225) | 18943..20007 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE42_RS24235 (LOE42_24230) | 20176..21108 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE42_RS24240 (LOE42_24235) | 21198..21500 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE42_RS24245 (LOE42_24240) | 21512..22378 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE42_RS24250 (LOE42_24245) | 22787..23743 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE42_RS24255 (LOE42_24250) | 23873..25396 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE42_RS24260 (LOE42_24255) | 25565..27400 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE42_RS24265 (LOE42_24260) | 27609..28295 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE42_RS24270 (LOE42_24265) | 28292..28999 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE42_RS24275 (LOE42_24270) | 29112..29867 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE42_RS24280 (LOE42_24275) | 30442..32031 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE42_RS24285 (LOE42_24280) | 32028..33464 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE42_RS24290 (LOE42_24285) | 33601..34611 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE42_RS24295 (LOE42_24290) | 35237..36439 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE42_RS24300 (LOE42_24295) | 36436..37416 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE42_RS24305 (LOE42_24300) | 37515..39599 | - | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE42_RS24310 (LOE42_24305) | 39599..40219 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE42_RS24315 (LOE42_24310) | 40410..41660 | + | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE42_RS24320 (LOE42_24315) | 41653..42348 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE42_RS24325 (LOE42_24320) | 42345..43670 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE42_RS24330 (LOE42_24325) | 43712..45166 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE42_RS24335 (LOE42_24330) | 45324..45911 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE42_RS24340 (LOE42_24335) | 46199..46762 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE42_RS24345 (LOE42_24340) | 46923..48896 | + | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE42_RS24350 (LOE42_24345) | 48902..49948 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE42_RS24355 (LOE42_24350) | 49918..52644 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE42_RS24360 (LOE42_24355) | 52783..53490 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE42_RS24365 (LOE42_24360) | 53499..55172 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE42_RS24370 (LOE42_24365) | 55588..56217 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE42_RS24375 (LOE42_24370) | 56241..57683 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE42_RS24380 (LOE42_24375) | 57709..59394 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE42_RS24385 (LOE42_24380) | 59416..61290 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE42_RS24390 (LOE42_24385) | 61376..62338 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE42_RS24395 (LOE42_24390) | 62605..63357 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE42_RS24400 (LOE42_24395) | 63354..64139 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE42_RS24405 (LOE42_24400) | 64132..64827 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE42_RS24410 (LOE42_24405) | 64843..65559 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE42_RS24415 (LOE42_24410) | 65569..65886 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE42_RS24420 (LOE42_24415) | 65917..67365 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE42_RS24425 (LOE42_24420) | 67362..68126 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE42_RS24430 (LOE42_24425) | 68170..69099 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE42_RS24435 (LOE42_24430) | 69096..70238 | - | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE42_RS24440 (LOE42_24435) | 70314..73204 | - | 2891 | Protein_59 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE42_RS24445 (LOE42_24440) | 73370..73957 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE42_RS24450 (LOE42_24445) | 74036..74854 | - | 819 | Protein_61 | GTP-binding protein | - |
| LOE42_RS24455 (LOE42_24450) | 75193..75426 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE42_RS24460 (LOE42_24455) | 75555..75860 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE42_RS24465 (LOE42_24460) | 75847..76776 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE42_RS24470 (LOE42_24465) | 77007..77435 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE42_RS24475 (LOE42_24470) | 77546..78133 | + | 588 | WP_229940666.1 | TetR/AcrR family transcriptional regulator | - |
| LOE42_RS24480 (LOE42_24475) | 78235..79449 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE42_RS24485 (LOE42_24480) | 79513..80487 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE42_RS24490 (LOE42_24485) | 80493..82028 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|