MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82231 bp
Accession: NZ_CP087041 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-67 Replicon: plasmid P9
Accession: NZ_CP087041 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-67 Replicon: plasmid P9
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE43_RS24360 (LOE43_24340) | 887..1180 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE43_RS24365 (LOE43_24345) | 1173..1448 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE43_RS24370 (LOE43_24350) | 1917..2687 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE43_RS24375 (LOE43_24355) | 2779..4326 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE43_RS24380 (LOE43_24360) | 4343..5659 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE43_RS24385 (LOE43_24365) | 5659..6837 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE43_RS24390 (LOE43_24370) | 7036..7731 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE43_RS24395 (LOE43_24375) | 8022..8900 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE43_RS24400 (LOE43_24380) | 8897..9952 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE43_RS24405 (LOE43_24385) | 9949..10509 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE43_RS24410 (LOE43_24390) | 10598..11515 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE43_RS24415 (LOE43_24395) | 11552..12478 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE43_RS24420 (LOE43_24400) | 12478..14220 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE43_RS24425 (LOE43_24405) | 14233..15429 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE43_RS24430 (LOE43_24410) | 15442..16962 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE43_RS24435 (LOE43_24415) | 17044..18108 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE43_RS24440 (LOE43_24420) | 18277..19209 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE43_RS24445 (LOE43_24425) | 19299..19601 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE43_RS24450 (LOE43_24430) | 19613..20479 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE43_RS24455 (LOE43_24435) | 20888..21844 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE43_RS24460 (LOE43_24440) | 21974..23497 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE43_RS24465 (LOE43_24445) | 23666..25501 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE43_RS24470 (LOE43_24450) | 25710..26396 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE43_RS24475 (LOE43_24455) | 26393..27100 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE43_RS24480 (LOE43_24460) | 27213..27968 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE43_RS24485 (LOE43_24465) | 28543..30132 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE43_RS24490 (LOE43_24470) | 30129..31565 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE43_RS24495 (LOE43_24475) | 31702..32712 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE43_RS24500 (LOE43_24480) | 33338..34540 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE43_RS24505 (LOE43_24485) | 34537..35517 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE43_RS24510 (LOE43_24490) | 35616..37688 | - | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE43_RS24515 (LOE43_24495) | 37700..38320 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE43_RS24520 (LOE43_24500) | 38517..39761 | + | 1245 | WP_224557592.1 | trypsin-like peptidase domain-containing protein | - |
| LOE43_RS24525 (LOE43_24505) | 39754..40449 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE43_RS24530 (LOE43_24510) | 40446..41771 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE43_RS24535 (LOE43_24515) | 41813..43267 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE43_RS24540 (LOE43_24520) | 43425..44012 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE43_RS24545 (LOE43_24525) | 44300..44863 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE43_RS24550 (LOE43_24530) | 45027..46997 | + | 1971 | WP_224557597.1 | caspase family protein | - |
| LOE43_RS24555 (LOE43_24535) | 47003..48049 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE43_RS24560 (LOE43_24540) | 48019..50745 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE43_RS24565 (LOE43_24545) | 50884..51591 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE43_RS24570 (LOE43_24550) | 51600..53273 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE43_RS24575 (LOE43_24555) | 53689..54318 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE43_RS24580 (LOE43_24560) | 54342..55784 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE43_RS24585 (LOE43_24565) | 55810..57495 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE43_RS24590 (LOE43_24570) | 57517..59391 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE43_RS24595 (LOE43_24575) | 59477..60439 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE43_RS24600 (LOE43_24580) | 60706..61458 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE43_RS24605 (LOE43_24585) | 61455..62240 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE43_RS24610 (LOE43_24590) | 62233..62928 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE43_RS24615 (LOE43_24595) | 62944..63660 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE43_RS24620 (LOE43_24600) | 63670..63987 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE43_RS24625 (LOE43_24605) | 64018..65466 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE43_RS24630 (LOE43_24610) | 65463..66227 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE43_RS24635 (LOE43_24615) | 66271..67200 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE43_RS24640 (LOE43_24620) | 67197..68306 | - | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE43_RS24645 (LOE43_24625) | 68415..71306 | - | 2892 | WP_224558003.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE43_RS24650 (LOE43_24630) | 71472..72059 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE43_RS24655 (LOE43_24635) | 72138..72956 | - | 819 | Protein_60 | GTP-binding protein | - |
| LOE43_RS24660 (LOE43_24640) | 73295..73528 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE43_RS24665 (LOE43_24645) | 73657..73962 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE43_RS24670 (LOE43_24650) | 73949..74878 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE43_RS24675 (LOE43_24655) | 75109..75537 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE43_RS24680 (LOE43_24660) | 75597..76235 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE43_RS24685 (LOE43_24665) | 76337..77551 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE43_RS24690 (LOE43_24670) | 77615..78589 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE43_RS24695 (LOE43_24675) | 78595..80130 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE43_RS24700 (LOE43_24680) | 80392..82131 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|