MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85375 bp
Accession: NZ_CP087018 Location: 1..85375 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-70 Replicon: plasmid P2
Accession: NZ_CP087018 Location: 1..85375 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-70 Replicon: plasmid P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE45_RS19565 (LOE45_19575) | 1..191 | + | 191 | Protein_0 | integrase | - |
| LOE45_RS19570 (LOE45_19580) | 295..3633 | - | 3339 | WP_224556255.1 | DEAD/DEAH box helicase | - |
| LOE45_RS19575 (LOE45_19585) | 3838..4725 | + | 888 | WP_114273238.1 | Tn3 family transposase ISPsy42 | Transposase |
| LOE45_RS19580 (LOE45_19590) | 5167..6369 | + | 1203 | WP_089852475.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE45_RS19585 (LOE45_19595) | 6359..7318 | + | 960 | WP_121066477.1 | plasmid partitioning protein RepB | - |
| LOE45_RS19590 (LOE45_19600) | 7558..8715 | + | 1158 | WP_121066480.1 | helix-turn-helix domain-containing protein | - |
| LOE45_RS19595 (LOE45_19605) | 8781..9824 | + | 1044 | WP_114276417.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE45_RS19600 (LOE45_19610) | 10115..12292 | + | 2178 | WP_224556256.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE45_RS19605 (LOE45_19615) | 12392..12865 | + | 474 | WP_114276003.1 | hypothetical protein | - |
| LOE45_RS19610 (LOE45_19620) | 13249..13413 | + | 165 | WP_007803240.1 | hypothetical protein | - |
| LOE45_RS19615 (LOE45_19625) | 13652..15097 | + | 1446 | WP_114276004.1 | hypothetical protein | - |
| LOE45_RS19620 (LOE45_19630) | 15107..15394 | - | 288 | WP_009827212.1 | H-NS histone family protein | - |
| LOE45_RS19625 (LOE45_19635) | 15814..16218 | + | 405 | WP_009827211.1 | single-stranded DNA-binding protein | - |
| LOE45_RS19630 (LOE45_19640) | 16273..16869 | - | 597 | WP_037954955.1 | hypothetical protein | - |
| LOE45_RS19635 (LOE45_19645) | 16909..17814 | + | 906 | WP_114276002.1 | hypothetical protein | - |
| LOE45_RS19640 (LOE45_19650) | 17952..19151 | + | 1200 | WP_121066443.1 | DUF932 domain-containing protein | - |
| LOE45_RS19645 (LOE45_19655) | 19279..19719 | + | 441 | WP_114276349.1 | DNA repair protein RadC | - |
| LOE45_RS19650 (LOE45_19660) | 19829..20347 | + | 519 | WP_114276373.1 | DNA repair protein RadC | - |
| LOE45_RS19655 (LOE45_19665) | 20451..20942 | + | 492 | WP_067297141.1 | hypothetical protein | - |
| LOE45_RS19660 (LOE45_19670) | 20953..21330 | + | 378 | WP_114276348.1 | hypothetical protein | - |
| LOE45_RS19665 (LOE45_19675) | 21332..21529 | + | 198 | WP_047998245.1 | hypothetical protein | - |
| LOE45_RS19670 (LOE45_19680) | 21605..22024 | + | 420 | WP_067297244.1 | hypothetical protein | - |
| LOE45_RS19675 (LOE45_19685) | 22017..22661 | + | 645 | WP_121066445.1 | antitoxin of toxin-antitoxin stability system | - |
| LOE45_RS19680 (LOE45_19690) | 22720..23121 | + | 402 | WP_067297291.1 | MbcA/ParS/Xre antitoxin family protein | - |
| LOE45_RS19685 (LOE45_19695) | 23118..23819 | + | 702 | WP_067297288.1 | RES family NAD+ phosphorylase | - |
| LOE45_RS19690 (LOE45_19700) | 24342..24635 | - | 294 | WP_067297285.1 | hypothetical protein | - |
| LOE45_RS19695 (LOE45_19705) | 24812..25192 | + | 381 | Protein_26 | hypothetical protein | - |
| LOE45_RS19700 (LOE45_19710) | 25294..26403 | + | 1110 | WP_224558030.1 | IS110 family transposase ISEc45 | Transposase |
| LOE45_RS19705 (LOE45_19715) | 26629..29298 | + | 2670 | WP_229939218.1 | strawberry notch family protein | - |
| LOE45_RS19710 (LOE45_19720) | 29275..29721 | - | 447 | Protein_29 | IS6 family transposase | - |
| LOE45_RS19715 (LOE45_19725) | 29791..30381 | + | 591 | WP_052418560.1 | LysR substrate-binding domain-containing protein | - |
| LOE45_RS19720 (LOE45_19730) | 30412..31332 | + | 921 | WP_043755133.1 | HTH-type transcriptional regulator GltC | VF |
| LOE45_RS19725 (LOE45_19735) | 31481..32479 | + | 999 | WP_052418559.1 | TRAP transporter substrate-binding protein DctP | - |
| LOE45_RS19730 (LOE45_19740) | 32545..33090 | + | 546 | WP_081979733.1 | TRAP transporter small permease | - |
| LOE45_RS19735 (LOE45_19745) | 33090..34370 | + | 1281 | WP_052418558.1 | TRAP transporter large permease | - |
| LOE45_RS19740 (LOE45_19750) | 34360..35703 | + | 1344 | WP_224557915.1 | MmgE/PrpD family protein | - |
| LOE45_RS19745 (LOE45_19755) | 35700..36194 | + | 495 | WP_043755128.1 | MaoC family dehydratase | - |
| LOE45_RS19750 (LOE45_19760) | 36191..37426 | + | 1236 | WP_043755124.1 | acyl-CoA dehydrogenase family protein | - |
| LOE45_RS19755 (LOE45_19765) | 37437..37922 | + | 486 | WP_043755138.1 | MaoC family dehydratase | - |
| LOE45_RS19760 (LOE45_19770) | 37919..39148 | + | 1230 | WP_043755120.1 | CoA transferase | - |
| LOE45_RS19765 (LOE45_19775) | 39158..40075 | + | 918 | WP_043755117.1 | CoA ester lyase | - |
| LOE45_RS19775 (LOE45_19785) | 40965..41596 | - | 632 | Protein_42 | IS3 family transposase ISPko4 | Transposase |
| LOE45_RS19780 (LOE45_19790) | 41726..42076 | + | 351 | WP_229939210.1 | hypothetical protein | - |
| LOE45_RS19785 (LOE45_19795) | 42277..42996 | - | 720 | WP_224557875.1 | hypothetical protein | - |
| LOE45_RS19790 (LOE45_19800) | 43153..44013 | + | 861 | WP_224557876.1 | LysR family transcriptional regulator | - |
| LOE45_RS19795 (LOE45_19805) | 44368..45387 | - | 1020 | WP_224557877.1 | IS110 family transposase ISAzs4 | Transposase |
| LOE45_RS19800 (LOE45_19810) | 45513..45938 | + | 426 | WP_224557878.1 | hypothetical protein | - |
| LOE45_RS19805 (LOE45_19815) | 46013..46978 | - | 966 | WP_224557879.1 | Transcriptional regulatory protein AfsQ1 | VF |
| LOE45_RS19810 (LOE45_19820) | 46975..48312 | - | 1338 | WP_224557880.1 | HAMP domain-containing sensor histidine kinase | - |
| LOE45_RS19815 (LOE45_19825) | 48309..48791 | - | 483 | WP_224557881.1 | molybdopterin-dependent oxidoreductase | - |
| LOE45_RS19820 (LOE45_19830) | 48928..49479 | + | 552 | WP_224557882.1 | hypothetical protein | - |
| LOE45_RS19825 (LOE45_19835) | 49481..50053 | + | 573 | WP_224557883.1 | hypothetical protein | - |
| LOE45_RS19830 (LOE45_19840) | 50062..50541 | + | 480 | WP_224557884.1 | hypothetical protein | - |
| LOE45_RS19835 (LOE45_19845) | 50538..51065 | + | 528 | WP_224557885.1 | hypothetical protein | - |
| LOE45_RS19840 (LOE45_19850) | 51062..51586 | + | 525 | WP_224557886.1 | hypothetical protein | - |
| LOE45_RS19845 (LOE45_19855) | 51610..52581 | + | 972 | WP_224557888.1 | hypothetical protein | - |
| LOE45_RS19850 (LOE45_19860) | 52578..54878 | + | 2301 | WP_224557889.1 | VWA domain-containing protein | - |
| LOE45_RS19855 (LOE45_19865) | 54917..55411 | + | 495 | WP_224557890.1 | hypothetical protein | - |
| LOE45_RS19860 (LOE45_19870) | 55408..55620 | + | 213 | WP_224557891.1 | hypothetical protein | - |
| LOE45_RS19865 (LOE45_19875) | 55623..56547 | - | 925 | Protein_60 | IS5 family transposase ISUnCu15 | Transposase |
| LOE45_RS19870 (LOE45_19880) | 56867..57895 | - | 1029 | WP_224557892.1 | IS110 family transposase ISPko7 | Transposase |
| LOE45_RS19875 (LOE45_19885) | 58179..60407 | - | 2229 | WP_224557893.1 | glycosyltransferase | - |
| LOE45_RS19880 (LOE45_19890) | 60404..61468 | - | 1065 | WP_224557894.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| LOE45_RS19885 (LOE45_19895) | 61939..63301 | + | 1363 | WP_229939207.1 | IS3 family transposase ISPko4 | Transposase |
| LOE45_RS19890 (LOE45_19900) | 63404..64204 | + | 801 | WP_284145095.1 | zinc-binding dehydrogenase | - |
| LOE45_RS19895 (LOE45_19905) | 64223..64753 | - | 531 | WP_224557955.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| LOE45_RS19900 (LOE45_19910) | 64817..68284 | + | 3468 | WP_224557954.1 | indolepyruvate ferredoxin oxidoreductase family protein | - |
| LOE45_RS19905 (LOE45_19915) | 68383..69393 | + | 1011 | WP_224557953.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LOE45_RS19910 (LOE45_19920) | 69776..70935 | + | 1160 | WP_224557952.1 | IS3 family transposase ISOba2 | Transposase |
| LOE45_RS19915 (LOE45_19925) | 70959..71156 | - | 198 | WP_224557951.1 | hypothetical protein | - |
| LOE45_RS19920 (LOE45_19930) | 71211..72596 | - | 1386 | WP_224558008.1 | ISKra4 family transposase ISUnCu7 | Transposase |
| LOE45_RS19925 (LOE45_19935) | 72623..73204 | - | 582 | WP_224558009.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LOE45_RS19930 (LOE45_19940) | 73323..73985 | - | 663 | WP_224558010.1 | plasmid pRiA4b ORF-3 family protein | - |
| LOE45_RS19935 (LOE45_19945) | 74046..74372 | - | 327 | Protein_74 | DEAD/DEAH box helicase family protein | - |
| LOE45_RS19940 (LOE45_19950) | 74548..76020 | - | 1473 | WP_224557920.1 | ATP-binding protein | - |
| LOE45_RS19945 (LOE45_19955) | 76182..77240 | - | 1059 | WP_224557922.1 | HEPN domain-containing protein | - |
| LOE45_RS19950 (LOE45_19960) | 77237..79987 | - | 2751 | WP_224557923.1 | lactate dehydrogenase | - |
| LOE45_RS19955 (LOE45_19965) | 79984..80406 | - | 423 | WP_224557924.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LOE45_RS19960 (LOE45_19970) | 80410..80658 | - | 249 | WP_229939240.1 | plasmid stabilization protein | Antitoxin Detail |
| LOE45_RS19965 (LOE45_19975) | 80806..81795 | - | 990 | WP_224557926.1 | Type IV secretion system protein VirB11 | VF |
| LOE45_RS19970 (LOE45_19980) | 81906..83363 | - | 1458 | WP_224557927.1 | Type IV secretion system protein PtlG | VF |
| LOE45_RS19975 (LOE45_19985) | 83366..84097 | - | 732 | WP_224557928.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LOE45_RS19980 (LOE45_19990) | 84101..84745 | - | 645 | WP_224557929.1 | Type IV secretion system protein PtlE | VF |
| LOE45_RS19985 (LOE45_19995) | 84748..85375 | - | 628 | WP_229992502.1 | type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|