MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110567 bp
Accession: NZ_CP087011 Location: 1..110567 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-71 Replicon: plasmid P2
Accession: NZ_CP087011 Location: 1..110567 Organism: Pseudosulfitobacter pseudonitzschiae strain MC52-71 Replicon: plasmid P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE46_RS20065 (LOE46_20070) | 1068..1862 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE46_RS20070 (LOE46_20075) | 1872..3470 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE46_RS20075 (LOE46_20080) | 3550..4164 | - | 615 | Protein_3 | IS21 family transposase ISPve1 | Transposase |
| LOE46_RS20080 (LOE46_20085) | 4161..5606 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE46_RS20085 (LOE46_20090) | 5767..6045 | - | 279 | Protein_5 | IS1595 family transposase ISOan10 | Transposase |
| LOE46_RS20090 (LOE46_20095) | 6334..7101 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE46_RS20095 (LOE46_20100) | 7137..7853 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE46_RS20100 (LOE46_20105) | 8832..9761 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE46_RS20105 (LOE46_20110) | 10300..10506 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE46_RS20110 (LOE46_20115) | 11059..11616 | + | 558 | WP_224557513.1 | transposase | - |
| LOE46_RS20115 (LOE46_20120) | 11603..13936 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE46_RS20120 (LOE46_20125) | 13945..15945 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE46_RS20125 (LOE46_20130) | 16063..16845 | - | 783 | Protein_13 | LysR family transcriptional regulator | - |
| LOE46_RS20130 (LOE46_20135) | 16829..17479 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE46_RS20135 (LOE46_20140) | 17527..18885 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE46_RS20140 (LOE46_20145) | 18897..20360 | - | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE46_RS20145 (LOE46_20150) | 20655..21077 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE46_RS20150 (LOE46_20155) | 21276..21476 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE46_RS20155 (LOE46_20160) | 21617..24124 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE46_RS20160 (LOE46_20165) | 24144..24563 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE46_RS20165 (LOE46_20170) | 24687..25559 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE46_RS20170 (LOE46_20175) | 25582..26346 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE46_RS20175 (LOE46_20180) | 26447..27187 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE46_RS20180 (LOE46_20185) | 27184..27675 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE46_RS20185 (LOE46_20190) | 27672..27872 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE46_RS20190 (LOE46_20195) | 28014..28979 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE46_RS20195 (LOE46_20200) | 28969..29724 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE46_RS20200 (LOE46_20205) | 29821..30399 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE46_RS20205 (LOE46_20210) | 30503..30931 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE46_RS20210 (LOE46_20215) | 31139..31705 | + | 567 | WP_028095363.1 | SCO family protein | - |
| LOE46_RS20215 (LOE46_20220) | 31711..32133 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE46_RS20220 (LOE46_20225) | 32130..32789 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE46_RS20225 (LOE46_20230) | 32813..33280 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE46_RS20230 (LOE46_20235) | 33280..33906 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE46_RS20235 (LOE46_20240) | 33903..35276 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE46_RS20240 (LOE46_20245) | 35280..35735 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE46_RS20245 (LOE46_20250) | 35748..36530 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE46_RS20250 (LOE46_20255) | 36559..37017 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE46_RS20255 (LOE46_20260) | 36984..38597 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE46_RS20260 (LOE46_20265) | 38588..38755 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE46_RS20265 (LOE46_20270) | 38816..40717 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE46_RS20270 (LOE46_20275) | 40714..41715 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE46_RS20275 (LOE46_20280) | 41935..42447 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE46_RS20280 (LOE46_20285) | 42630..42896 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE46_RS20285 (LOE46_20290) | 42931..45285 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE46_RS20290 (LOE46_20295) | 45468..45752 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE46_RS20295 (LOE46_20300) | 45800..46462 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE46_RS20300 (LOE46_20305) | 46754..47206 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE46_RS20305 (LOE46_20310) | 47268..47762 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE46_RS20310 (LOE46_20315) | 47762..48691 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE46_RS20315 (LOE46_20320) | 48709..50154 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE46_RS20320 (LOE46_20325) | 50316..50765 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE46_RS20325 (LOE46_20330) | 50760..51212 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE46_RS20330 (LOE46_20335) | 51539..52537 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE46_RS20335 (LOE46_20340) | 52534..53715 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE46_RS20340 (LOE46_20345) | 54043..55041 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE46_RS20345 (LOE46_20350) | 55202..56836 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE46_RS20350 (LOE46_20355) | 56853..57719 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE46_RS20355 (LOE46_20360) | 58743..59354 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE46_RS20360 (LOE46_20365) | 59402..60286 | - | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE46_RS20365 (LOE46_20370) | 60413..61552 | + | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE46_RS20370 (LOE46_20375) | 61654..62145 | + | 492 | Protein_62 | recombinase family protein | - |
| LOE46_RS20375 (LOE46_20380) | 62224..62619 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE46_RS20380 (LOE46_20385) | 62609..62836 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE46_RS20385 (LOE46_20390) | 63045..64238 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE46_RS20390 (LOE46_20395) | 64222..65154 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE46_RS20395 (LOE46_20400) | 65368..66579 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE46_RS20400 (LOE46_20405) | 66748..68509 | + | 1762 | Protein_68 | ParB N-terminal domain-containing protein | - |
| LOE46_RS20405 (LOE46_20410) | 68666..70033 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE46_RS20410 (LOE46_20415) | 70030..70689 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE46_RS20415 (LOE46_20420) | 70835..71152 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE46_RS20420 (LOE46_20425) | 71109..72494 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE46_RS20425 (LOE46_20430) | 72675..73055 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE46_RS20430 (LOE46_20435) | 73091..73561 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE46_RS20435 (LOE46_20440) | 73573..75780 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE46_RS20440 (LOE46_20445) | 75761..76741 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE46_RS20445 (LOE46_20450) | 76747..78654 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE46_RS20450 (LOE46_20455) | 78651..79352 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE46_RS20455 (LOE46_20460) | 79488..79649 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE46_RS20460 (LOE46_20465) | 79678..79971 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE46_RS20465 (LOE46_20470) | 80324..80794 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE46_RS20470 (LOE46_20475) | 80835..81773 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE46_RS20475 (LOE46_20480) | 81797..82069 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE46_RS20480 (LOE46_20485) | 82157..82546 | + | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE46_RS20485 (LOE46_20490) | 82761..83792 | + | 1032 | WP_224558028.1 | IS110 family transposase ISRhru3 | Transposase |
| LOE46_RS20490 (LOE46_20495) | 84260..86242 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE46_RS20495 (LOE46_20500) | 86315..87007 | + | 693 | WP_224557484.1 | regulator | - |
| LOE46_RS20500 (LOE46_20505) | 87007..87660 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE46_RS20505 (LOE46_20510) | 87784..88110 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE46_RS20510 (LOE46_20515) | 88107..88624 | + | 518 | Protein_90 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE46_RS20515 (LOE46_20520) | 89163..89444 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE46_RS20520 (LOE46_20525) | 89663..90792 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRosp1 | Transposase |
| LOE46_RS20525 (LOE46_20530) | 90819..91211 | + | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE46_RS20530 (LOE46_20535) | 91392..92213 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE46_RS20535 (LOE46_20540) | 92210..93250 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE46_RS20540 (LOE46_20545) | 93247..94182 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE46_RS20545 (LOE46_20550) | 94187..94975 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE46_RS20550 (LOE46_20555) | 95014..96015 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE46_RS20555 (LOE46_20560) | 96113..96967 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE46_RS20560 (LOE46_20565) | 97000..97854 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE46_RS20565 (LOE46_20570) | 97862..98668 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE46_RS20570 (LOE46_20575) | 98661..99461 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE46_RS20575 (LOE46_20580) | 99458..100516 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE46_RS20580 (LOE46_20585) | 100509..101381 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE46_RS20585 (LOE46_20590) | 101408..102574 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE46_RS20590 (LOE46_20595) | 102629..103330 | - | 702 | WP_083416142.1 | TetR/AcrR family transcriptional regulator | - |
| LOE46_RS20595 (LOE46_20600) | 103305..103631 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE46_RS20600 (LOE46_20605) | 103628..104395 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE46_RS20605 (LOE46_20610) | 104461..104976 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE46_RS20610 (LOE46_20615) | 104973..106259 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE46_RS20615 (LOE46_20620) | 106288..107490 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE46_RS20620 (LOE46_20625) | 107653..108153 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE46_RS20625 (LOE46_20630) | 108473..109639 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE46_RS20630 (LOE46_20635) | 109636..110544 | - | 909 | WP_229943290.1 | biotin/lipoyl-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|