MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 111866 bp
Accession: NZ_CP087005 Location: 1..111866 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-105 Replicon: plasmid P3
Accession: NZ_CP087005 Location: 1..111866 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-105 Replicon: plasmid P3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE06_RS21530 (LOE06_21500) | 170..1804 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE06_RS21535 (LOE06_21505) | 1821..2687 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE06_RS21540 (LOE06_21510) | 3711..4322 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE06_RS21545 (LOE06_21515) | 4370..5254 | - | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE06_RS21550 (LOE06_21520) | 5369..6520 | + | 1152 | WP_224557873.1 | tyrosine-type recombinase/integrase | - |
| LOE06_RS21555 (LOE06_21525) | 6622..7113 | + | 492 | Protein_5 | recombinase family protein | - |
| LOE06_RS21560 (LOE06_21530) | 7192..7587 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE06_RS21565 (LOE06_21535) | 7577..7804 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE06_RS21570 (LOE06_21540) | 8013..9206 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE06_RS21575 (LOE06_21545) | 9190..10122 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE06_RS21580 (LOE06_21550) | 10336..11547 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE06_RS21585 (LOE06_21555) | 11716..13477 | + | 1762 | Protein_11 | ParB N-terminal domain-containing protein | - |
| LOE06_RS21590 (LOE06_21560) | 13634..15001 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE06_RS21595 (LOE06_21565) | 14998..15657 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE06_RS21600 (LOE06_21570) | 15803..16120 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE06_RS21605 (LOE06_21575) | 16077..17462 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE06_RS21610 (LOE06_21580) | 17643..18023 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE06_RS21615 (LOE06_21585) | 18059..18529 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE06_RS21620 (LOE06_21590) | 18541..20748 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE06_RS21625 (LOE06_21595) | 20729..21709 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE06_RS21630 (LOE06_21600) | 21715..23622 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE06_RS21635 (LOE06_21605) | 23619..24320 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE06_RS21640 (LOE06_21610) | 24456..24617 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE06_RS21645 (LOE06_21615) | 24646..24939 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE06_RS21650 (LOE06_21620) | 25292..25762 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE06_RS21655 (LOE06_21625) | 25803..26741 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE06_RS21660 (LOE06_21630) | 26765..27037 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE06_RS21665 (LOE06_21635) | 27125..27514 | + | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE06_RS21670 (LOE06_21640) | 27729..28759 | + | 1031 | Protein_28 | IS110 family transposase ISRhru3 | Transposase |
| LOE06_RS21675 (LOE06_21645) | 29227..31209 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE06_RS21680 (LOE06_21650) | 31282..31974 | + | 693 | WP_224557484.1 | regulator | - |
| LOE06_RS21685 (LOE06_21655) | 31974..32627 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE06_RS21690 (LOE06_21660) | 32751..33077 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE06_RS21695 (LOE06_21665) | 33074..33591 | + | 518 | Protein_33 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE06_RS21700 (LOE06_21670) | 34130..34411 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE06_RS21705 (LOE06_21675) | 34630..35759 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRhba2 | Transposase |
| LOE06_RS21710 (LOE06_21680) | 35756..35905 | - | 150 | WP_224557495.1 | hypothetical protein | - |
| LOE06_RS21715 (LOE06_21685) | 36359..37180 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE06_RS21720 (LOE06_21690) | 37177..38217 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE06_RS21725 (LOE06_21695) | 38214..39149 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE06_RS21730 (LOE06_21700) | 39154..39942 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE06_RS21735 (LOE06_21705) | 39981..40982 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE06_RS21740 (LOE06_21710) | 41080..41934 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE06_RS21745 (LOE06_21715) | 41967..42821 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE06_RS21750 (LOE06_21720) | 42829..43635 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE06_RS21755 (LOE06_21725) | 43628..44428 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE06_RS21760 (LOE06_21730) | 44425..45483 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE06_RS21765 (LOE06_21735) | 45476..46348 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE06_RS21770 (LOE06_21740) | 46375..47541 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE06_RS21775 (LOE06_21745) | 47596..48282 | - | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE06_RS21780 (LOE06_21750) | 48272..48598 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE06_RS21785 (LOE06_21755) | 48595..49362 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE06_RS21790 (LOE06_21760) | 49428..49943 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE06_RS21795 (LOE06_21765) | 49940..51226 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE06_RS21800 (LOE06_21770) | 51255..52457 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE06_RS21805 (LOE06_21775) | 52620..53120 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE06_RS21810 (LOE06_21780) | 53440..54606 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE06_RS21815 (LOE06_21785) | 54603..56606 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE06_RS21820 (LOE06_21790) | 56603..57397 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE06_RS21825 (LOE06_21795) | 57407..59005 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE06_RS21830 (LOE06_21800) | 59085..59699 | - | 615 | Protein_60 | IS21 family transposase ISPve1 | Transposase |
| LOE06_RS21835 (LOE06_21805) | 59696..61141 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE06_RS21840 (LOE06_21810) | 61302..61580 | - | 279 | Protein_62 | transposase | - |
| LOE06_RS21845 (LOE06_21815) | 61869..62636 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE06_RS21850 (LOE06_21820) | 62672..63388 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE06_RS21855 (LOE06_21825) | 63715..64758 | - | 1044 | WP_114276417.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE06_RS21860 (LOE06_21830) | 65664..66593 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE06_RS21865 (LOE06_21835) | 67132..67338 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE06_RS21870 (LOE06_21840) | 67891..68448 | + | 558 | WP_224557513.1 | transposase | - |
| LOE06_RS21875 (LOE06_21845) | 68435..70768 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE06_RS21880 (LOE06_21850) | 70777..72777 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE06_RS21885 (LOE06_21855) | 72895..73677 | - | 783 | Protein_71 | LysR family transcriptional regulator | - |
| LOE06_RS21890 (LOE06_21860) | 73661..74311 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE06_RS21895 (LOE06_21865) | 74359..75717 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE06_RS21900 (LOE06_21870) | 75729..77192 | - | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE06_RS21905 (LOE06_21875) | 77487..77909 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE06_RS21910 (LOE06_21880) | 78108..78308 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE06_RS21915 (LOE06_21885) | 78449..80956 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE06_RS21920 (LOE06_21890) | 80976..81395 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE06_RS21925 (LOE06_21895) | 81519..82391 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE06_RS21930 (LOE06_21900) | 82414..83178 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE06_RS21935 (LOE06_21905) | 83279..84019 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE06_RS21940 (LOE06_21910) | 84016..84507 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE06_RS21945 (LOE06_21915) | 84504..84704 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE06_RS21950 (LOE06_21920) | 84846..85811 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE06_RS21955 (LOE06_21925) | 85801..86556 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE06_RS21960 (LOE06_21930) | 86653..87231 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE06_RS21965 (LOE06_21935) | 87335..87763 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE06_RS21970 (LOE06_21940) | 87971..88537 | + | 567 | WP_028095363.1 | SCO family protein | - |
| LOE06_RS21975 (LOE06_21945) | 88543..88965 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE06_RS21980 (LOE06_21950) | 88962..89621 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE06_RS21985 (LOE06_21955) | 89645..90112 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE06_RS21990 (LOE06_21960) | 90112..90738 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE06_RS21995 (LOE06_21965) | 90735..92108 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE06_RS22000 (LOE06_21970) | 92112..92567 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE06_RS22005 (LOE06_21975) | 92580..93362 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE06_RS22010 (LOE06_21980) | 93391..93849 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE06_RS22015 (LOE06_21985) | 93816..95429 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE06_RS22020 (LOE06_21990) | 95420..95587 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE06_RS22025 (LOE06_21995) | 95648..97549 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE06_RS22030 (LOE06_22000) | 97546..98547 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE06_RS22035 (LOE06_22005) | 98767..99279 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE06_RS22040 (LOE06_22010) | 99462..99728 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE06_RS22045 (LOE06_22015) | 99763..102117 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE06_RS22050 (LOE06_22020) | 102300..102584 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE06_RS22055 (LOE06_22025) | 102632..103294 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE06_RS22060 (LOE06_22030) | 103586..104038 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE06_RS22065 (LOE06_22035) | 104100..104594 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE06_RS22070 (LOE06_22040) | 104594..105523 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE06_RS22075 (LOE06_22045) | 105541..106986 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE06_RS22080 | 107123..107467 | - | 345 | WP_054540799.1 | hypothetical protein | - |
| LOE06_RS22085 (LOE06_22055) | 107592..108044 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE06_RS22090 (LOE06_22060) | 108371..109369 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE06_RS22095 (LOE06_22065) | 109366..110547 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE06_RS22100 (LOE06_22070) | 110875..111858 | - | 984 | WP_229941123.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|