MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 111866 bp
Accession: NZ_CP087001 Location: 1..111866 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-109 Replicon: plasmid P6
Accession: NZ_CP087001 Location: 1..111866 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-109 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE07_RS23760 (LOE07_23735) | 1247..1414 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE07_RS23765 (LOE07_23740) | 1475..3376 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE07_RS23770 (LOE07_23745) | 3373..4374 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE07_RS23775 (LOE07_23750) | 4594..5106 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE07_RS23780 (LOE07_23755) | 5289..5555 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE07_RS23785 (LOE07_23760) | 5590..7944 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE07_RS23790 (LOE07_23765) | 8127..8411 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE07_RS23795 (LOE07_23770) | 8459..9121 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE07_RS23800 (LOE07_23775) | 9413..9865 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE07_RS23805 (LOE07_23780) | 9927..10421 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE07_RS23810 (LOE07_23785) | 10421..11350 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE07_RS23815 (LOE07_23790) | 11368..12813 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE07_RS23820 (LOE07_23795) | 12975..13424 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE07_RS23825 (LOE07_23800) | 13419..13871 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE07_RS23830 (LOE07_23805) | 14198..15196 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE07_RS23835 (LOE07_23810) | 15193..16374 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE07_RS23840 (LOE07_23815) | 16702..17700 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE07_RS23845 (LOE07_23820) | 17861..19495 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE07_RS23850 (LOE07_23825) | 19512..20378 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE07_RS23855 (LOE07_23830) | 21402..22013 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE07_RS23860 (LOE07_23835) | 22061..22945 | - | 885 | WP_229997756.1 | DUF1403 family protein | - |
| LOE07_RS23865 (LOE07_23840) | 23060..24211 | + | 1152 | WP_224557873.1 | tyrosine-type recombinase/integrase | - |
| LOE07_RS23870 (LOE07_23845) | 24313..24804 | + | 492 | Protein_23 | recombinase family protein | - |
| LOE07_RS23875 (LOE07_23850) | 24883..25278 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE07_RS23880 (LOE07_23855) | 25268..25495 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE07_RS23885 (LOE07_23860) | 25704..26897 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE07_RS23890 (LOE07_23865) | 26881..27813 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE07_RS23895 (LOE07_23870) | 28027..29238 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE07_RS23900 (LOE07_23875) | 29407..31168 | + | 1762 | Protein_29 | ParB N-terminal domain-containing protein | - |
| LOE07_RS23905 (LOE07_23880) | 31325..32692 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE07_RS23910 (LOE07_23885) | 32689..33348 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE07_RS23915 (LOE07_23890) | 33494..33811 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE07_RS23920 (LOE07_23895) | 33768..35153 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE07_RS23925 (LOE07_23900) | 35334..35714 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE07_RS23930 (LOE07_23905) | 35750..36220 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE07_RS23935 (LOE07_23910) | 36232..38439 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE07_RS23940 (LOE07_23915) | 38420..39400 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE07_RS23945 (LOE07_23920) | 39406..41313 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE07_RS23950 (LOE07_23925) | 41310..42011 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE07_RS23955 (LOE07_23930) | 42147..42308 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE07_RS23960 (LOE07_23935) | 42337..42630 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE07_RS23965 (LOE07_23940) | 42983..43453 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE07_RS23970 (LOE07_23945) | 43494..44432 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE07_RS23975 (LOE07_23950) | 44456..44728 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE07_RS23980 (LOE07_23955) | 44816..45205 | + | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE07_RS23985 (LOE07_23960) | 45420..46450 | + | 1031 | Protein_46 | IS110 family transposase ISRhru3 | Transposase |
| LOE07_RS23990 (LOE07_23965) | 46918..48900 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE07_RS23995 (LOE07_23970) | 48973..49665 | + | 693 | WP_224557484.1 | regulator | - |
| LOE07_RS24000 (LOE07_23975) | 49665..50318 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE07_RS24005 (LOE07_23980) | 50442..50768 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE07_RS24010 (LOE07_23985) | 50765..51282 | + | 518 | Protein_51 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE07_RS24015 (LOE07_23990) | 51821..52102 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE07_RS24020 (LOE07_23995) | 52321..53450 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRosp1 | Transposase |
| LOE07_RS24025 (LOE07_24000) | 53447..53596 | - | 150 | WP_224557495.1 | hypothetical protein | - |
| LOE07_RS24030 (LOE07_24005) | 54050..54871 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE07_RS24035 (LOE07_24010) | 54868..55908 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE07_RS24040 (LOE07_24015) | 55905..56840 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE07_RS24045 (LOE07_24020) | 56845..57633 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE07_RS24050 (LOE07_24025) | 57672..58673 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE07_RS24055 (LOE07_24030) | 58771..59625 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE07_RS24060 (LOE07_24035) | 59658..60512 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE07_RS24065 (LOE07_24040) | 60520..61326 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE07_RS24070 (LOE07_24045) | 61319..62119 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE07_RS24075 (LOE07_24050) | 62116..63174 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE07_RS24080 (LOE07_24055) | 63167..64039 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE07_RS24085 (LOE07_24060) | 64066..65232 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE07_RS24090 (LOE07_24065) | 65287..65973 | - | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE07_RS24095 (LOE07_24070) | 65963..66289 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE07_RS24100 (LOE07_24075) | 66286..67053 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE07_RS24105 (LOE07_24080) | 67119..67634 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE07_RS24110 (LOE07_24085) | 67631..68917 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE07_RS24115 (LOE07_24090) | 68946..70148 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE07_RS24120 (LOE07_24095) | 70311..70811 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE07_RS24125 (LOE07_24100) | 71131..72297 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE07_RS24130 (LOE07_24105) | 72294..74297 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE07_RS24135 (LOE07_24110) | 74294..75088 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE07_RS24140 (LOE07_24115) | 75098..76696 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE07_RS24145 (LOE07_24120) | 76776..77390 | - | 615 | Protein_78 | IS21 family transposase ISPve1 | Transposase |
| LOE07_RS24150 (LOE07_24125) | 77387..78832 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE07_RS24155 (LOE07_24130) | 78993..79271 | - | 279 | Protein_80 | transposase | - |
| LOE07_RS24160 (LOE07_24135) | 79560..80327 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE07_RS24165 (LOE07_24140) | 80363..81079 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE07_RS24170 (LOE07_24145) | 81406..82446 | - | 1041 | Protein_83 | IS5 family transposase | - |
| LOE07_RS24175 (LOE07_24150) | 83352..84281 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE07_RS24180 (LOE07_24155) | 84820..85026 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE07_RS24185 (LOE07_24160) | 85579..86136 | + | 558 | WP_224557513.1 | transposase | - |
| LOE07_RS24190 (LOE07_24165) | 86123..88456 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE07_RS24195 (LOE07_24170) | 88465..90465 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE07_RS24200 (LOE07_24175) | 90583..91365 | - | 783 | Protein_89 | LysR family transcriptional regulator | - |
| LOE07_RS24205 (LOE07_24180) | 91349..91999 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE07_RS24210 (LOE07_24185) | 92047..93405 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE07_RS24215 (LOE07_24190) | 93417..94881 | - | 1465 | Protein_92 | TolC family protein | - |
| LOE07_RS24220 (LOE07_24195) | 95176..95598 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE07_RS24225 (LOE07_24200) | 95797..95997 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE07_RS24230 (LOE07_24205) | 96138..98645 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE07_RS24235 (LOE07_24210) | 98665..99084 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE07_RS24240 (LOE07_24215) | 99208..100080 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE07_RS24245 (LOE07_24220) | 100103..100867 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE07_RS24250 (LOE07_24225) | 100968..101708 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE07_RS24255 (LOE07_24230) | 101705..102196 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE07_RS24260 (LOE07_24235) | 102193..102393 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE07_RS24265 (LOE07_24240) | 102535..103500 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE07_RS24270 (LOE07_24245) | 103490..104245 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE07_RS24275 (LOE07_24250) | 104342..104920 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE07_RS24280 (LOE07_24255) | 105024..105452 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE07_RS24285 (LOE07_24260) | 105624..106226 | + | 603 | WP_224557520.1 | SCO family protein | - |
| LOE07_RS24290 (LOE07_24265) | 106232..106654 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE07_RS24295 (LOE07_24270) | 106651..107310 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE07_RS24300 (LOE07_24275) | 107334..107801 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE07_RS24305 (LOE07_24280) | 107801..108427 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE07_RS24310 (LOE07_24285) | 108424..109797 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE07_RS24315 (LOE07_24290) | 109801..110256 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE07_RS24320 (LOE07_24295) | 110269..111051 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE07_RS24325 (LOE07_24300) | 111080..111538 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|