MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82234 bp
Accession: NZ_CP086981 Location: 1..82234 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-111 Replicon: plasmid P2
Accession: NZ_CP086981 Location: 1..82234 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-111 Replicon: plasmid P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE09_RS19845 (LOE09_19840) | 1620..2630 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE09_RS19850 (LOE09_19845) | 2767..4203 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE09_RS19855 (LOE09_19850) | 4200..5789 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE09_RS19860 (LOE09_19855) | 6364..7119 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE09_RS19865 (LOE09_19860) | 7232..7939 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE09_RS19870 (LOE09_19865) | 7936..8622 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE09_RS19875 (LOE09_19870) | 8831..10666 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE09_RS19880 (LOE09_19875) | 10835..12358 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE09_RS19885 (LOE09_19880) | 12488..13444 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE09_RS19890 (LOE09_19885) | 13853..14719 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE09_RS19895 (LOE09_19890) | 14731..15033 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE09_RS19900 (LOE09_19895) | 15123..16055 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE09_RS19905 (LOE09_19900) | 16224..17288 | + | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE09_RS19910 (LOE09_19905) | 17370..18890 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE09_RS19915 (LOE09_19910) | 18903..20099 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE09_RS19920 (LOE09_19915) | 20112..21854 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE09_RS19925 (LOE09_19920) | 21854..22780 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE09_RS19930 (LOE09_19925) | 22817..23734 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE09_RS19935 (LOE09_19930) | 23823..24383 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE09_RS19940 (LOE09_19935) | 24380..25435 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE09_RS19945 (LOE09_19940) | 25432..26310 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE09_RS19950 (LOE09_19945) | 26601..27296 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE09_RS19955 (LOE09_19950) | 27495..28673 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE09_RS19960 (LOE09_19955) | 28673..29989 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE09_RS19965 (LOE09_19960) | 30006..31553 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE09_RS19970 (LOE09_19965) | 31645..32415 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE09_RS19975 (LOE09_19970) | 32884..33159 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE09_RS19980 (LOE09_19975) | 33152..33445 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE09_RS19985 (LOE09_19980) | 33516..34421 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE09_RS19990 (LOE09_19985) | 34432..36171 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE09_RS19995 (LOE09_19990) | 36433..37968 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE09_RS20000 (LOE09_19995) | 37974..38948 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE09_RS20005 (LOE09_20000) | 39012..40226 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE09_RS20010 (LOE09_20005) | 40328..40966 | - | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE09_RS20015 (LOE09_20010) | 41026..41454 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE09_RS20020 (LOE09_20015) | 41685..42614 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE09_RS20025 (LOE09_20020) | 42601..42906 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE09_RS20030 (LOE09_20025) | 43035..43268 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE09_RS20035 (LOE09_20030) | 43607..44425 | + | 819 | Protein_39 | GTP-binding protein | - |
| LOE09_RS20040 (LOE09_20035) | 44504..45091 | - | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE09_RS20045 (LOE09_20040) | 45257..48147 | + | 2891 | Protein_41 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE09_RS20050 (LOE09_20045) | 48256..49365 | + | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE09_RS20055 (LOE09_20050) | 49362..50291 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE09_RS20060 (LOE09_20055) | 50335..51099 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE09_RS20065 (LOE09_20060) | 51096..52544 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE09_RS20070 (LOE09_20065) | 52575..52892 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE09_RS20075 (LOE09_20070) | 52902..53618 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE09_RS20080 (LOE09_20075) | 53634..54329 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE09_RS20085 (LOE09_20080) | 54322..55107 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE09_RS20090 (LOE09_20085) | 55104..55856 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE09_RS20095 (LOE09_20090) | 56123..57085 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE09_RS20100 (LOE09_20095) | 57171..59045 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE09_RS20105 (LOE09_20100) | 59067..60752 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE09_RS20110 (LOE09_20105) | 60778..62220 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE09_RS20115 (LOE09_20110) | 62244..62873 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE09_RS20120 (LOE09_20115) | 63289..64962 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE09_RS20125 (LOE09_20120) | 64971..65678 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE09_RS20130 (LOE09_20125) | 65817..68543 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE09_RS20135 (LOE09_20130) | 68513..69559 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE09_RS20140 (LOE09_20135) | 69565..71538 | - | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE09_RS20145 (LOE09_20140) | 71699..72262 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE09_RS20150 (LOE09_20145) | 72550..73137 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE09_RS20155 (LOE09_20150) | 73295..74749 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE09_RS20160 (LOE09_20155) | 74791..76116 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE09_RS20165 (LOE09_20160) | 76113..76808 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE09_RS20170 (LOE09_20165) | 76801..78051 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE09_RS20175 (LOE09_20170) | 78242..78862 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE09_RS20180 (LOE09_20175) | 78862..80946 | + | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE09_RS20185 (LOE09_20180) | 81045..82025 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|