MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110568 bp
Accession: NZ_CP086975 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-114 Replicon: plasmid P4
Accession: NZ_CP086975 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-114 Replicon: plasmid P4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE10_RS22465 (LOE10_22450) | 140..412 | - | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE10_RS22470 (LOE10_22455) | 436..1374 | - | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE10_RS22475 (LOE10_22460) | 1415..1885 | - | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE10_RS22480 (LOE10_22465) | 2238..2531 | + | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE10_RS22485 (LOE10_22470) | 2560..2721 | - | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE10_RS22490 (LOE10_22475) | 2857..3558 | - | 702 | WP_028288616.1 | VIT family protein | - |
| LOE10_RS22495 (LOE10_22480) | 3555..5462 | - | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE10_RS22500 (LOE10_22485) | 5468..6448 | - | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE10_RS22505 (LOE10_22490) | 6429..8636 | - | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE10_RS22510 (LOE10_22495) | 8648..9118 | - | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE10_RS22515 (LOE10_22500) | 9154..9534 | - | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE10_RS22520 (LOE10_22505) | 9715..11100 | - | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE10_RS22525 (LOE10_22510) | 11057..11374 | - | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE10_RS22530 (LOE10_22515) | 11520..12179 | + | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE10_RS22535 (LOE10_22520) | 12176..13543 | + | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE10_RS22540 (LOE10_22525) | 13700..15461 | - | 1762 | Protein_16 | ParB N-terminal domain-containing protein | - |
| LOE10_RS22545 (LOE10_22530) | 15630..16841 | - | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE10_RS22550 (LOE10_22535) | 17055..17987 | - | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE10_RS22555 (LOE10_22540) | 17971..19164 | - | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE10_RS22560 (LOE10_22545) | 19373..19600 | + | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE10_RS22565 (LOE10_22550) | 19590..19985 | + | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE10_RS22570 (LOE10_22555) | 20064..20555 | - | 492 | Protein_22 | recombinase family protein | - |
| LOE10_RS22575 (LOE10_22560) | 20657..21796 | - | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE10_RS22580 (LOE10_22565) | 21923..22807 | + | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE10_RS22585 (LOE10_22570) | 22855..23466 | + | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE10_RS22590 (LOE10_22575) | 24490..25356 | - | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE10_RS22595 (LOE10_22580) | 25373..27007 | - | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE10_RS22600 (LOE10_22585) | 27168..28166 | + | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE10_RS22605 (LOE10_22590) | 28494..29675 | - | 1182 | WP_224557529.1 | metal transporter | - |
| LOE10_RS22610 (LOE10_22595) | 29672..30670 | - | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE10_RS22615 (LOE10_22600) | 30997..31449 | + | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE10_RS22620 (LOE10_22605) | 31444..31773 | - | 330 | WP_229992974.1 | hypothetical protein | - |
| LOE10_RS22625 (LOE10_22610) | 32055..33500 | + | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE10_RS22630 (LOE10_22615) | 33518..34447 | + | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE10_RS22635 (LOE10_22620) | 34447..34941 | + | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE10_RS22640 (LOE10_22625) | 35003..35455 | + | 453 | WP_224557528.1 | cytochrome c | - |
| LOE10_RS22645 (LOE10_22630) | 35747..36409 | + | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE10_RS22650 (LOE10_22635) | 36457..36741 | - | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE10_RS22655 (LOE10_22640) | 36924..39278 | + | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE10_RS22660 (LOE10_22645) | 39313..39579 | + | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE10_RS22665 (LOE10_22650) | 39762..40274 | + | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE10_RS22670 (LOE10_22655) | 40494..41495 | - | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE10_RS22675 (LOE10_22660) | 41492..43393 | - | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE10_RS22680 (LOE10_22665) | 43454..43621 | - | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE10_RS22685 (LOE10_22670) | 43612..45225 | - | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE10_RS22690 (LOE10_22675) | 45192..45650 | - | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE10_RS22695 (LOE10_22680) | 45679..46461 | - | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE10_RS22700 (LOE10_22685) | 46474..46929 | - | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE10_RS22705 (LOE10_22690) | 46933..48306 | - | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE10_RS22710 (LOE10_22695) | 48303..48929 | - | 627 | WP_028095367.1 | SCO family protein | - |
| LOE10_RS22715 (LOE10_22700) | 48929..49396 | - | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE10_RS22720 (LOE10_22705) | 49420..50079 | - | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE10_RS22725 (LOE10_22710) | 50076..50498 | - | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE10_RS22730 (LOE10_22715) | 50504..51070 | - | 567 | WP_028095363.1 | SCO family protein | - |
| LOE10_RS22735 (LOE10_22720) | 51278..51706 | + | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE10_RS22740 (LOE10_22725) | 51810..52388 | + | 579 | WP_028095362.1 | cation transporter | - |
| LOE10_RS22745 (LOE10_22730) | 52485..53240 | + | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE10_RS22750 (LOE10_22735) | 53230..54195 | + | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE10_RS22755 (LOE10_22740) | 54337..54537 | + | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE10_RS22760 (LOE10_22745) | 54534..55025 | + | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE10_RS22765 (LOE10_22750) | 55022..55762 | + | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE10_RS22770 (LOE10_22755) | 55863..56627 | - | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE10_RS22775 (LOE10_22760) | 56650..57522 | - | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE10_RS22780 (LOE10_22765) | 57646..58065 | - | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE10_RS22785 (LOE10_22770) | 58085..60592 | - | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE10_RS22790 (LOE10_22775) | 60733..60933 | + | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE10_RS22795 (LOE10_22780) | 61132..61554 | + | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE10_RS22800 (LOE10_22785) | 61849..63312 | + | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE10_RS22805 (LOE10_22790) | 63324..64682 | + | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE10_RS22810 (LOE10_22795) | 64730..65380 | + | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE10_RS22815 (LOE10_22800) | 65364..66146 | + | 783 | Protein_71 | LysR family transcriptional regulator | - |
| LOE10_RS22820 (LOE10_22805) | 66264..68264 | - | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE10_RS22825 (LOE10_22810) | 68273..70606 | - | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE10_RS22830 (LOE10_22815) | 70593..71150 | - | 558 | WP_224557513.1 | transposase | - |
| LOE10_RS22835 (LOE10_22820) | 71703..71909 | - | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE10_RS22840 (LOE10_22825) | 72448..73377 | - | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE10_RS22845 (LOE10_22830) | 74356..75072 | + | 717 | WP_224557509.1 | methyltransferase | - |
| LOE10_RS22850 (LOE10_22835) | 75108..75875 | - | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE10_RS22855 (LOE10_22840) | 76164..76442 | + | 279 | Protein_79 | transposase | - |
| LOE10_RS22860 (LOE10_22845) | 76603..78048 | + | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE10_RS22865 (LOE10_22850) | 78045..78659 | + | 615 | Protein_81 | IS21 family transposase ISPve1 | Transposase |
| LOE10_RS22870 (LOE10_22855) | 78739..80337 | + | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE10_RS22875 (LOE10_22860) | 80347..81141 | + | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE10_RS22880 (LOE10_22865) | 81138..83141 | + | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE10_RS22885 (LOE10_22870) | 83138..84304 | + | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE10_RS22890 (LOE10_22875) | 84624..85124 | - | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE10_RS22895 (LOE10_22880) | 85287..86489 | + | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE10_RS22900 (LOE10_22885) | 86518..87804 | + | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE10_RS22905 (LOE10_22890) | 87801..88316 | + | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE10_RS22910 (LOE10_22895) | 88382..89149 | + | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE10_RS22915 (LOE10_22900) | 89146..89472 | + | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE10_RS22920 (LOE10_22905) | 89447..90148 | + | 702 | WP_083416142.1 | TetR/AcrR family transcriptional regulator | - |
| LOE10_RS22925 (LOE10_22910) | 90203..91369 | + | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE10_RS22930 (LOE10_22915) | 91396..92268 | + | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE10_RS22935 (LOE10_22920) | 92261..93319 | + | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE10_RS22940 (LOE10_22925) | 93316..94116 | + | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE10_RS22945 (LOE10_22930) | 94109..94915 | + | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE10_RS22950 (LOE10_22935) | 94923..95777 | + | 855 | WP_224557497.1 | VOC family protein | - |
| LOE10_RS22955 (LOE10_22940) | 95810..96664 | + | 855 | WP_074838803.1 | VOC family protein | - |
| LOE10_RS22960 (LOE10_22945) | 96762..97763 | + | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE10_RS22965 (LOE10_22950) | 97802..98590 | + | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE10_RS22970 (LOE10_22955) | 98595..99530 | + | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE10_RS22975 (LOE10_22960) | 99527..100567 | + | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE10_RS22980 (LOE10_22965) | 100564..101385 | + | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE10_RS22985 | 101839..101988 | + | 150 | WP_224557495.1 | hypothetical protein | - |
| LOE10_RS22995 (LOE10_22980) | 103333..103614 | + | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE10_RS23000 (LOE10_22985) | 104153..104670 | - | 518 | Protein_108 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE10_RS23005 (LOE10_22990) | 104667..104993 | - | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE10_RS23010 (LOE10_22995) | 105117..105770 | - | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE10_RS23015 (LOE10_23000) | 105770..106462 | - | 693 | WP_224557484.1 | regulator | - |
| LOE10_RS23020 (LOE10_23005) | 106535..108517 | - | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE10_RS23025 (LOE10_23010) | 108985..110016 | - | 1032 | WP_224558028.1 | IS110 family transposase ISRhru3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|