MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110567 bp
Accession: NZ_CP086955 Location: 1..110567 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-27 Replicon: plasmid P1
Accession: NZ_CP086955 Location: 1..110567 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-27 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE13_RS19250 (LOE13_19245) | 552..1583 | + | 1032 | WP_224558028.1 | IS110 family transposase ISRhru3 | Transposase |
| LOE13_RS19255 (LOE13_19250) | 2051..4033 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE13_RS19260 (LOE13_19255) | 4106..4798 | + | 693 | WP_224557484.1 | regulator | - |
| LOE13_RS19265 (LOE13_19260) | 4798..5451 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE13_RS19270 (LOE13_19265) | 5575..5901 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE13_RS19275 (LOE13_19270) | 5898..6415 | + | 518 | Protein_6 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE13_RS19280 (LOE13_19275) | 6954..7235 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE13_RS19285 (LOE13_19280) | 7454..8583 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRosp1 | Transposase |
| LOE13_RS19290 (LOE13_19285) | 8610..9002 | + | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE13_RS19295 (LOE13_19290) | 9183..10004 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE13_RS19300 (LOE13_19295) | 10001..11041 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE13_RS19305 (LOE13_19300) | 11038..11973 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE13_RS19310 (LOE13_19305) | 11978..12766 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE13_RS19315 (LOE13_19310) | 12805..13806 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE13_RS19320 (LOE13_19315) | 13904..14758 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE13_RS19325 (LOE13_19320) | 14791..15645 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE13_RS19330 (LOE13_19325) | 15653..16459 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE13_RS19335 (LOE13_19330) | 16452..17252 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE13_RS19340 (LOE13_19335) | 17249..18307 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE13_RS19345 (LOE13_19340) | 18300..19172 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE13_RS19350 (LOE13_19345) | 19199..20365 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE13_RS19355 (LOE13_19350) | 20420..21106 | - | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE13_RS19360 (LOE13_19355) | 21096..21422 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE13_RS19365 (LOE13_19360) | 21419..22186 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE13_RS19370 (LOE13_19365) | 22252..22767 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE13_RS19375 (LOE13_19370) | 22764..24050 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE13_RS19380 (LOE13_19375) | 24079..25281 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE13_RS19385 (LOE13_19380) | 25444..25944 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE13_RS19390 (LOE13_19385) | 26264..27430 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE13_RS19395 (LOE13_19390) | 27427..29430 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE13_RS19400 (LOE13_19395) | 29427..30221 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE13_RS19405 (LOE13_19400) | 30231..31829 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE13_RS19410 (LOE13_19405) | 31909..32523 | - | 615 | Protein_33 | IS21 family transposase ISPve1 | Transposase |
| LOE13_RS19415 (LOE13_19410) | 32520..33965 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE13_RS19420 (LOE13_19415) | 34126..34404 | - | 279 | Protein_35 | transposase | - |
| LOE13_RS19425 (LOE13_19420) | 34693..35460 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE13_RS19430 (LOE13_19425) | 35496..36212 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE13_RS19435 (LOE13_19430) | 37191..38120 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE13_RS19440 (LOE13_19435) | 38659..38865 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE13_RS19445 (LOE13_19440) | 39418..39975 | + | 558 | WP_224557513.1 | transposase | - |
| LOE13_RS19450 (LOE13_19445) | 39962..42295 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE13_RS19455 (LOE13_19450) | 42304..44304 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE13_RS19460 (LOE13_19455) | 44422..45204 | - | 783 | Protein_43 | LysR family transcriptional regulator | - |
| LOE13_RS19465 (LOE13_19460) | 45188..45838 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE13_RS19470 (LOE13_19465) | 45886..47244 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE13_RS19475 (LOE13_19470) | 47256..48719 | - | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE13_RS19480 (LOE13_19475) | 49014..49436 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE13_RS19485 (LOE13_19480) | 49635..49835 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE13_RS19490 (LOE13_19485) | 49976..52483 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE13_RS19495 (LOE13_19490) | 52503..52922 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE13_RS19500 (LOE13_19495) | 53046..53918 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE13_RS19505 (LOE13_19500) | 53941..54705 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE13_RS19510 (LOE13_19505) | 54806..55546 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE13_RS19515 (LOE13_19510) | 55543..56034 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE13_RS19520 (LOE13_19515) | 56031..56231 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE13_RS19525 (LOE13_19520) | 56373..57338 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE13_RS19530 (LOE13_19525) | 57328..58083 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE13_RS19535 (LOE13_19530) | 58180..58758 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE13_RS19540 (LOE13_19535) | 58862..59290 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE13_RS19545 (LOE13_19540) | 59498..60064 | + | 567 | WP_028095363.1 | SCO family protein | - |
| LOE13_RS19550 (LOE13_19545) | 60070..60492 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE13_RS19555 (LOE13_19550) | 60489..61148 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE13_RS19560 (LOE13_19555) | 61172..61639 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE13_RS19565 (LOE13_19560) | 61639..62265 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE13_RS19570 (LOE13_19565) | 62262..63635 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE13_RS19575 (LOE13_19570) | 63639..64094 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE13_RS19580 (LOE13_19575) | 64107..64889 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE13_RS19585 (LOE13_19580) | 64918..65376 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE13_RS19590 (LOE13_19585) | 65343..66956 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE13_RS19595 (LOE13_19590) | 66947..67114 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE13_RS19600 (LOE13_19595) | 67175..69076 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE13_RS19605 (LOE13_19600) | 69073..70074 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE13_RS19610 (LOE13_19605) | 70294..70806 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE13_RS19615 (LOE13_19610) | 70989..71255 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE13_RS19620 (LOE13_19615) | 71290..73644 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE13_RS19625 (LOE13_19620) | 73827..74111 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE13_RS19630 (LOE13_19625) | 74159..74821 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE13_RS19635 (LOE13_19630) | 75113..75565 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE13_RS19640 (LOE13_19635) | 75627..76121 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE13_RS19645 (LOE13_19640) | 76121..77050 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE13_RS19650 (LOE13_19645) | 77068..78513 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE13_RS19655 (LOE13_19650) | 78675..79124 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE13_RS19660 (LOE13_19655) | 79119..79571 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE13_RS19665 (LOE13_19660) | 79898..80896 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE13_RS19670 (LOE13_19665) | 80893..82074 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE13_RS19675 (LOE13_19670) | 82402..83400 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE13_RS19680 (LOE13_19675) | 83561..85195 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE13_RS19685 (LOE13_19680) | 85212..86078 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE13_RS19690 (LOE13_19685) | 87102..87713 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE13_RS19695 (LOE13_19690) | 87761..88645 | - | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE13_RS19700 (LOE13_19695) | 88772..89911 | + | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE13_RS19705 (LOE13_19700) | 90013..90504 | + | 492 | Protein_92 | recombinase family protein | - |
| LOE13_RS19710 (LOE13_19705) | 90583..90978 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE13_RS19715 (LOE13_19710) | 90968..91195 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE13_RS19720 (LOE13_19715) | 91404..92597 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE13_RS19725 (LOE13_19720) | 92581..93513 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE13_RS19730 (LOE13_19725) | 93727..94938 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE13_RS19735 (LOE13_19730) | 95107..96868 | + | 1762 | Protein_98 | ParB N-terminal domain-containing protein | - |
| LOE13_RS19740 (LOE13_19735) | 97025..98392 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE13_RS19745 (LOE13_19740) | 98389..99048 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE13_RS19750 (LOE13_19745) | 99194..99511 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE13_RS19755 (LOE13_19750) | 99468..100853 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE13_RS19760 (LOE13_19755) | 101034..101414 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE13_RS19765 (LOE13_19760) | 101450..101920 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE13_RS19770 (LOE13_19765) | 101932..104139 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE13_RS19775 (LOE13_19770) | 104120..105100 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE13_RS19780 (LOE13_19775) | 105106..107013 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE13_RS19785 (LOE13_19780) | 107010..107711 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE13_RS19790 (LOE13_19785) | 107847..108008 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE13_RS19795 (LOE13_19790) | 108037..108330 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE13_RS19800 (LOE13_19795) | 108683..109153 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE13_RS19805 (LOE13_19800) | 109194..110132 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE13_RS19810 (LOE13_19805) | 110156..110428 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|