MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82230 bp
Accession: NZ_CP086952 Location: 1..82230 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-28 Replicon: plasmid P5
Accession: NZ_CP086952 Location: 1..82230 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-28 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE14_RS22360 (LOE14_22375) | 1024..1719 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE14_RS22365 (LOE14_22380) | 1716..3041 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE14_RS22370 (LOE14_22385) | 3083..4537 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE14_RS22375 (LOE14_22390) | 4695..5282 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE14_RS22380 (LOE14_22395) | 5570..6133 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE14_RS22385 (LOE14_22400) | 6297..8267 | + | 1971 | WP_224557597.1 | caspase family protein | - |
| LOE14_RS22390 (LOE14_22405) | 8273..9319 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE14_RS22395 (LOE14_22410) | 9289..12015 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE14_RS22400 (LOE14_22415) | 12154..12861 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE14_RS22405 (LOE14_22420) | 12870..14543 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE14_RS22410 (LOE14_22425) | 14959..15588 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE14_RS22415 (LOE14_22430) | 15612..17054 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE14_RS22420 (LOE14_22435) | 17080..18765 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE14_RS22425 (LOE14_22440) | 18787..20661 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE14_RS22430 (LOE14_22445) | 20747..21709 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE14_RS22435 (LOE14_22450) | 21976..22728 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE14_RS22440 (LOE14_22455) | 22725..23510 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE14_RS22445 (LOE14_22460) | 23503..24198 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE14_RS22450 (LOE14_22465) | 24214..24930 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE14_RS22455 (LOE14_22470) | 24940..25257 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE14_RS22460 (LOE14_22475) | 25288..26736 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE14_RS22465 (LOE14_22480) | 26733..27497 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE14_RS22470 (LOE14_22485) | 27541..28470 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE14_RS22475 (LOE14_22490) | 28467..29609 | - | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE14_RS22480 (LOE14_22495) | 29685..32575 | - | 2891 | Protein_25 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE14_RS22485 (LOE14_22500) | 32741..33328 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE14_RS22490 (LOE14_22505) | 33407..34225 | - | 819 | Protein_27 | GTP-binding protein | - |
| LOE14_RS22495 (LOE14_22510) | 34564..34797 | - | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE14_RS22500 (LOE14_22515) | 34926..35231 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE14_RS22505 (LOE14_22520) | 35218..36147 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE14_RS22510 (LOE14_22525) | 36378..36806 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE14_RS22515 (LOE14_22530) | 36866..37504 | + | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE14_RS22520 (LOE14_22535) | 37606..38820 | + | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE14_RS22525 (LOE14_22540) | 38884..39858 | - | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE14_RS22530 (LOE14_22545) | 39864..41399 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE14_RS22535 (LOE14_22550) | 41661..43400 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE14_RS22540 (LOE14_22555) | 43411..44316 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE14_RS22545 (LOE14_22560) | 44387..44680 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE14_RS22550 (LOE14_22565) | 44673..44948 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE14_RS22555 (LOE14_22570) | 45417..46187 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE14_RS22560 (LOE14_22575) | 46279..47826 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE14_RS22565 (LOE14_22580) | 47843..49159 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE14_RS22570 (LOE14_22585) | 49159..50337 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE14_RS22575 (LOE14_22590) | 50536..51231 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE14_RS22580 (LOE14_22595) | 51522..52400 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE14_RS22585 (LOE14_22600) | 52397..53452 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE14_RS22590 (LOE14_22605) | 53449..54009 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE14_RS22595 (LOE14_22610) | 54098..55015 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE14_RS22600 (LOE14_22615) | 55052..55978 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE14_RS22605 (LOE14_22620) | 55978..57720 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE14_RS22610 (LOE14_22625) | 57733..58929 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE14_RS22615 (LOE14_22630) | 58942..60462 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE14_RS22620 (LOE14_22635) | 60544..61608 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE14_RS22625 (LOE14_22640) | 61777..62709 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE14_RS22630 (LOE14_22645) | 62799..63101 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE14_RS22635 (LOE14_22650) | 63113..63979 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE14_RS22640 (LOE14_22655) | 64388..65344 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE14_RS22645 (LOE14_22660) | 65474..66997 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE14_RS22650 (LOE14_22665) | 67166..69001 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE14_RS22655 (LOE14_22670) | 69210..69896 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE14_RS22660 (LOE14_22675) | 69893..70600 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE14_RS22665 (LOE14_22680) | 70713..71468 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE14_RS22670 (LOE14_22685) | 72043..73632 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE14_RS22675 (LOE14_22690) | 73629..75065 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE14_RS22680 (LOE14_22695) | 75202..76212 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE14_RS22685 (LOE14_22700) | 76838..78040 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE14_RS22690 (LOE14_22705) | 78037..79017 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE14_RS22695 (LOE14_22710) | 79116..81188 | - | 2073 | WP_224557590.1 | caspase family protein | - |
| LOE14_RS22700 (LOE14_22715) | 81200..81820 | - | 621 | WP_224557591.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|