MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 157664 bp
Accession: NZ_CP086945 Location: 1..157664 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-29 Replicon: plasmid P7
Accession: NZ_CP086945 Location: 1..157664 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-29 Replicon: plasmid P7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE15_RS22300 (LOE15_22255) | 867..1751 | + | 885 | WP_229939227.1 | DUF1403 family protein | - |
| LOE15_RS22305 (LOE15_22260) | 1755..2351 | + | 597 | WP_109535033.1 | SMC-Scp complex subunit ScpB | - |
| LOE15_RS22310 (LOE15_22265) | 3375..4241 | - | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE15_RS22315 (LOE15_22270) | 4258..5892 | - | 1635 | WP_229939245.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE15_RS22320 (LOE15_22275) | 6193..7950 | - | 1758 | WP_224557756.1 | alpha/beta hydrolase | - |
| LOE15_RS22325 (LOE15_22280) | 8264..10195 | + | 1932 | WP_229941949.1 | VWA domain-containing protein | - |
| LOE15_RS22330 (LOE15_22285) | 10213..11076 | + | 864 | WP_224557754.1 | hypothetical protein | - |
| LOE15_RS22335 (LOE15_22290) | 11089..11610 | + | 522 | WP_224557753.1 | hypothetical protein | - |
| LOE15_RS22340 (LOE15_22295) | 12212..13171 | + | 960 | WP_224557752.1 | hypothetical protein | - |
| LOE15_RS22345 (LOE15_22300) | 13345..14664 | - | 1320 | WP_224557751.1 | MFS transporter | - |
| LOE15_RS22350 (LOE15_22305) | 14673..14933 | - | 261 | WP_007120627.1 | metal-sensing transcriptional repressor | - |
| LOE15_RS22355 (LOE15_22310) | 15435..16163 | + | 729 | WP_224557750.1 | HupE/UreJ family protein | - |
| LOE15_RS22360 (LOE15_22315) | 16181..16804 | + | 624 | WP_037929504.1 | hypothetical protein | - |
| LOE15_RS22365 (LOE15_22320) | 17016..17369 | + | 354 | WP_224557748.1 | hypothetical protein | - |
| LOE15_RS22370 (LOE15_22325) | 17460..18899 | + | 1440 | WP_082899302.1 | multicopper oxidase family protein | - |
| LOE15_RS22375 (LOE15_22330) | 18940..19395 | + | 456 | WP_037929510.1 | DUF411 domain-containing protein | - |
| LOE15_RS23590 | 19462..19596 | + | 135 | WP_263481059.1 | hypothetical protein | - |
| LOE15_RS22380 (LOE15_22335) | 19746..20171 | + | 426 | WP_224557746.1 | cytochrome c | - |
| LOE15_RS22385 (LOE15_22340) | 20168..20764 | + | 597 | WP_037929514.1 | DsbE family thiol:disulfide interchange protein | - |
| LOE15_RS22390 (LOE15_22345) | 20761..21273 | + | 513 | WP_037929516.1 | TlpA disulfide reductase family protein | - |
| LOE15_RS22395 (LOE15_22350) | 21356..21646 | + | 291 | WP_037929519.1 | hypothetical protein | - |
| LOE15_RS22400 (LOE15_22355) | 21646..22350 | + | 705 | WP_037929522.1 | SCO family protein | - |
| LOE15_RS22405 (LOE15_22360) | 22347..22838 | + | 492 | WP_081855445.1 | hypothetical protein | - |
| LOE15_RS22410 (LOE15_22365) | 22835..23575 | + | 741 | WP_037929528.1 | cytochrome c biogenesis protein CcdA | - |
| LOE15_RS22415 (LOE15_22370) | 23572..24681 | - | 1110 | WP_224557743.1 | permease | - |
| LOE15_RS22420 (LOE15_22375) | 24768..25493 | - | 726 | WP_037929534.1 | glutaredoxin domain-containing protein | - |
| LOE15_RS22425 (LOE15_22380) | 25555..26424 | - | 870 | WP_037929537.1 | DUF305 domain-containing protein | - |
| LOE15_RS22430 (LOE15_22385) | 26532..26951 | - | 420 | WP_037929540.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE15_RS22435 (LOE15_22390) | 26971..29478 | - | 2508 | WP_067293079.1 | heavy metal translocating P-type ATPase | - |
| LOE15_RS22440 (LOE15_22395) | 29617..29826 | + | 210 | WP_037929722.1 | heavy-metal-associated domain-containing protein | - |
| LOE15_RS22445 (LOE15_22400) | 29999..30415 | + | 417 | WP_037929545.1 | hypothetical protein | - |
| LOE15_RS22450 (LOE15_22405) | 30489..30710 | + | 222 | WP_223865963.1 | hypothetical protein | - |
| LOE15_RS22455 (LOE15_22410) | 30710..32170 | + | 1461 | WP_067293082.1 | TolC family protein | - |
| LOE15_RS22460 (LOE15_22415) | 32182..33540 | + | 1359 | WP_224557742.1 | copper oxidase | - |
| LOE15_RS22465 (LOE15_22420) | 33587..34303 | + | 717 | WP_037929554.1 | copper-binding protein | - |
| LOE15_RS22470 (LOE15_22425) | 34413..34946 | + | 534 | WP_009820144.1 | plastocyanin/azurin family copper-binding protein | - |
| LOE15_RS22475 (LOE15_22430) | 34955..36259 | + | 1305 | WP_009820143.1 | ABC transporter transmembrane domain-containing protein | - |
| LOE15_RS22480 (LOE15_22435) | 36256..36714 | + | 459 | WP_037929563.1 | cytochrome c | - |
| LOE15_RS22485 (LOE15_22440) | 36811..38052 | + | 1242 | WP_224557739.1 | sialidase family protein | - |
| LOE15_RS22490 (LOE15_22445) | 38096..41251 | - | 3156 | WP_224557738.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| LOE15_RS22495 (LOE15_22450) | 41248..42684 | - | 1437 | WP_067293091.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LOE15_RS22500 (LOE15_22455) | 42681..43079 | - | 399 | WP_067293094.1 | FixH family protein | - |
| LOE15_RS22505 (LOE15_22460) | 43606..45933 | - | 2328 | WP_111550081.1 | heavy metal translocating P-type ATPase | - |
| LOE15_RS22510 (LOE15_22465) | 46150..48501 | + | 2352 | WP_190325599.1 | cation-translocating P-type ATPase | - |
| LOE15_RS22515 (LOE15_22470) | 48563..49063 | + | 501 | WP_067293139.1 | L,D-transpeptidase family protein | - |
| LOE15_RS22520 (LOE15_22475) | 49089..49253 | - | 165 | WP_170134538.1 | hypothetical protein | - |
| LOE15_RS22525 (LOE15_22480) | 49250..50785 | - | 1536 | WP_224557736.1 | apolipoprotein N-acyltransferase | - |
| LOE15_RS22530 (LOE15_22485) | 50792..51268 | - | 477 | WP_067293102.1 | signal peptidase II | - |
| LOE15_RS22535 (LOE15_22490) | 51272..52054 | - | 783 | WP_090270173.1 | ZIP family metal transporter | - |
| LOE15_RS22540 (LOE15_22495) | 52065..52517 | - | 453 | WP_067293107.1 | DUF411 domain-containing protein | - |
| LOE15_RS22545 (LOE15_22500) | 52538..53854 | - | 1317 | WP_229940656.1 | M23 family metallopeptidase | - |
| LOE15_RS22550 (LOE15_22505) | 53884..54504 | - | 621 | WP_224557759.1 | SCO family protein | - |
| LOE15_RS22555 (LOE15_22510) | 54516..54947 | - | 432 | WP_067293146.1 | copper chaperone PCu(A)C | - |
| LOE15_RS22560 (LOE15_22515) | 55018..55680 | - | 663 | WP_067293112.1 | thioredoxin domain-containing protein | - |
| LOE15_RS22565 (LOE15_22520) | 55677..56120 | - | 444 | WP_007120864.1 | disulfide bond formation protein B | - |
| LOE15_RS22570 (LOE15_22525) | 56117..56656 | - | 540 | WP_223865966.1 | SCO family protein | - |
| LOE15_RS22575 (LOE15_22530) | 56904..57332 | + | 429 | WP_224557734.1 | helix-turn-helix domain-containing protein | - |
| LOE15_RS22580 (LOE15_22535) | 57329..57655 | + | 327 | WP_067293118.1 | YnfA family protein | - |
| LOE15_RS22585 (LOE15_22540) | 57769..58386 | + | 618 | WP_024099354.1 | cation transporter | - |
| LOE15_RS22590 (LOE15_22545) | 58473..59243 | + | 771 | WP_067293121.1 | transglutaminase family protein | - |
| LOE15_RS22595 (LOE15_22550) | 59233..60141 | + | 909 | Protein_61 | cation diffusion facilitator family transporter | - |
| LOE15_RS22600 (LOE15_22555) | 60134..60691 | + | 558 | WP_040652314.1 | methyltransferase | - |
| LOE15_RS22605 (LOE15_22560) | 60800..61390 | + | 591 | WP_224557758.1 | L,D-transpeptidase | - |
| LOE15_RS22610 (LOE15_22565) | 61408..61677 | + | 270 | WP_111550076.1 | hypothetical protein | - |
| LOE15_RS22615 (LOE15_22570) | 61761..62426 | - | 666 | WP_067293124.1 | L,D-transpeptidase | - |
| LOE15_RS22620 (LOE15_22575) | 62681..63838 | - | 1158 | WP_229939233.1 | replication initiation protein RepC | - |
| LOE15_RS22625 (LOE15_22580) | 64059..64712 | - | 654 | WP_121066465.1 | hypothetical protein | - |
| LOE15_RS22630 (LOE15_22585) | 64798..65067 | - | 270 | WP_111550073.1 | hypothetical protein | - |
| LOE15_RS22635 (LOE15_22595) | 65656..66237 | + | 582 | WP_224557975.1 | lytic transglycosylase domain-containing protein | - |
| LOE15_RS22640 (LOE15_22600) | 66234..66518 | + | 285 | WP_224557971.1 | TrbC/VirB2 family protein | - |
| LOE15_RS22645 (LOE15_22605) | 66542..66817 | + | 276 | WP_009819926.1 | VirB3 family type IV secretion system protein | - |
| LOE15_RS22650 (LOE15_22610) | 66918..69176 | + | 2259 | WP_229940657.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LOE15_RS22655 (LOE15_22615) | 69342..70430 | + | 1089 | WP_224557968.1 | lytic transglycosylase domain-containing protein | - |
| LOE15_RS22660 (LOE15_22620) | 70420..71229 | + | 810 | WP_224557967.1 | type IV secretion system protein | - |
| LOE15_RS22665 (LOE15_22625) | 71233..71721 | + | 489 | WP_229939238.1 | hypothetical protein | - |
| LOE15_RS22670 (LOE15_22630) | 71721..72722 | + | 1002 | WP_224557930.1 | type IV secretion system protein | - |
| LOE15_RS22675 (LOE15_22635) | 72725..73369 | + | 645 | WP_224557929.1 | type IV secretion system protein | - |
| LOE15_RS22680 (LOE15_22640) | 73373..74104 | + | 732 | WP_224557928.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LOE15_RS22685 (LOE15_22645) | 74107..75564 | + | 1458 | WP_224557927.1 | TrbI/VirB10 family protein | - |
| LOE15_RS22690 (LOE15_22650) | 75675..76664 | + | 990 | WP_224557926.1 | P-type DNA transfer ATPase VirB11 | - |
| LOE15_RS22695 (LOE15_22655) | 76812..77060 | + | 249 | WP_229939240.1 | plasmid stabilization protein | Antitoxin Detail |
| LOE15_RS22700 (LOE15_22660) | 77064..77486 | + | 423 | WP_224557924.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LOE15_RS22705 (LOE15_22665) | 77483..80233 | + | 2751 | WP_224557923.1 | lactate dehydrogenase | - |
| LOE15_RS22710 (LOE15_22670) | 80230..81288 | + | 1059 | WP_224557922.1 | HEPN domain-containing protein | - |
| LOE15_RS22715 (LOE15_22675) | 81468..82922 | + | 1455 | WP_229941945.1 | ATP-binding protein | - |
| LOE15_RS22720 (LOE15_22680) | 83098..83424 | + | 327 | Protein_86 | DEAD/DEAH box helicase family protein | - |
| LOE15_RS22725 (LOE15_22685) | 83485..84147 | + | 663 | WP_224558010.1 | plasmid pRiA4b ORF-3 family protein | - |
| LOE15_RS22730 (LOE15_22690) | 84266..84846 | + | 581 | Protein_88 | recombinase family protein | - |
| LOE15_RS22735 (LOE15_22695) | 84873..86258 | + | 1386 | WP_224558008.1 | ISKra4 family transposase | - |
| LOE15_RS22740 (LOE15_22700) | 86313..86510 | + | 198 | WP_224557951.1 | hypothetical protein | - |
| LOE15_RS22750 (LOE15_22710) | 88076..89086 | - | 1011 | WP_224557953.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LOE15_RS22755 (LOE15_22715) | 89185..92652 | - | 3468 | WP_224557954.1 | indolepyruvate ferredoxin oxidoreductase family protein | - |
| LOE15_RS22760 (LOE15_22720) | 92842..93246 | + | 405 | WP_229939178.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| LOE15_RS22765 (LOE15_22725) | 93265..94050 | - | 786 | WP_229939180.1 | zinc-binding dehydrogenase | - |
| LOE15_RS22775 (LOE15_22735) | 96040..97065 | + | 1026 | WP_229942672.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| LOE15_RS22780 (LOE15_22740) | 97062..99290 | + | 2229 | WP_224557893.1 | glycosyltransferase | - |
| LOE15_RS22785 (LOE15_22745) | 99574..100602 | + | 1029 | WP_224557892.1 | IS110 family transposase | - |
| LOE15_RS22790 (LOE15_22750) | 100922..101846 | + | 925 | Protein_100 | IS5-like element ISUnCu15 family transposase | - |
| LOE15_RS22795 (LOE15_22755) | 101849..102061 | - | 213 | WP_224557891.1 | hypothetical protein | - |
| LOE15_RS22800 (LOE15_22760) | 102058..102594 | - | 537 | WP_229940780.1 | hypothetical protein | - |
| LOE15_RS22805 (LOE15_22765) | 102591..104891 | - | 2301 | WP_224557889.1 | VWA domain-containing protein | - |
| LOE15_RS22810 (LOE15_22770) | 104888..105859 | - | 972 | WP_224557888.1 | hypothetical protein | - |
| LOE15_RS22815 (LOE15_22775) | 105883..106407 | - | 525 | WP_224557886.1 | hypothetical protein | - |
| LOE15_RS22820 (LOE15_22780) | 106404..106931 | - | 528 | WP_224557885.1 | hypothetical protein | - |
| LOE15_RS22825 (LOE15_22785) | 106928..107407 | - | 480 | WP_224557884.1 | hypothetical protein | - |
| LOE15_RS22830 (LOE15_22790) | 107416..107988 | - | 573 | WP_224557883.1 | hypothetical protein | - |
| LOE15_RS22835 (LOE15_22795) | 107990..108541 | - | 552 | WP_224557882.1 | hypothetical protein | - |
| LOE15_RS22840 (LOE15_22800) | 108678..109160 | + | 483 | WP_224557881.1 | molybdopterin-dependent oxidoreductase | - |
| LOE15_RS22845 (LOE15_22805) | 109157..110494 | + | 1338 | WP_224557880.1 | HAMP domain-containing sensor histidine kinase | - |
| LOE15_RS22850 (LOE15_22810) | 110491..111456 | + | 966 | WP_224557879.1 | response regulator | - |
| LOE15_RS22855 (LOE15_22815) | 111531..111956 | - | 426 | WP_224557878.1 | hypothetical protein | - |
| LOE15_RS22860 (LOE15_22820) | 112082..113101 | + | 1020 | WP_224557877.1 | IS110 family transposase | - |
| LOE15_RS22865 (LOE15_22825) | 113456..114316 | - | 861 | WP_224557876.1 | LysR family transcriptional regulator | - |
| LOE15_RS22870 (LOE15_22830) | 114473..115192 | + | 720 | WP_224557875.1 | hypothetical protein | - |
| LOE15_RS22875 (LOE15_22835) | 115393..115812 | - | 420 | WP_229940658.1 | hypothetical protein | - |
| LOE15_RS22880 (LOE15_22840) | 115873..116503 | + | 631 | Protein_118 | transposase | - |
| LOE15_RS22885 (LOE15_22845) | 116569..117326 | + | 758 | WP_156127956.1 | IS5 family transposase | - |
| LOE15_RS22890 (LOE15_22850) | 117393..118310 | - | 918 | WP_043755117.1 | CoA ester lyase | - |
| LOE15_RS22895 (LOE15_22855) | 118320..119549 | - | 1230 | WP_043755120.1 | CoA transferase | - |
| LOE15_RS22900 (LOE15_22860) | 119546..120031 | - | 486 | WP_043755138.1 | MaoC family dehydratase | - |
| LOE15_RS22905 (LOE15_22865) | 120042..121277 | - | 1236 | WP_043755124.1 | acyl-CoA dehydrogenase family protein | - |
| LOE15_RS22910 (LOE15_22870) | 121274..121768 | - | 495 | WP_043755128.1 | MaoC family dehydratase | - |
| LOE15_RS22915 (LOE15_22875) | 121765..123108 | - | 1344 | WP_224557915.1 | MmgE/PrpD family protein | - |
| LOE15_RS22920 (LOE15_22880) | 123098..124378 | - | 1281 | WP_052418558.1 | TRAP transporter large permease | - |
| LOE15_RS22925 (LOE15_22885) | 124378..124923 | - | 546 | WP_081979733.1 | TRAP transporter small permease | - |
| LOE15_RS22930 (LOE15_22890) | 124989..125987 | - | 999 | WP_052418559.1 | TRAP transporter substrate-binding protein DctP | - |
| LOE15_RS22935 (LOE15_22895) | 126136..127056 | - | 921 | WP_043755133.1 | LysR family transcriptional regulator | - |
| LOE15_RS22940 (LOE15_22900) | 127087..127806 | - | 720 | WP_229939243.1 | LysR substrate-binding domain-containing protein | - |
| LOE15_RS22945 (LOE15_22905) | 127747..128193 | + | 447 | Protein_131 | IS6 family transposase | - |
| LOE15_RS22950 (LOE15_22910) | 128170..130839 | - | 2670 | WP_229939218.1 | strawberry notch family protein | - |
| LOE15_RS22955 (LOE15_22915) | 131065..132174 | - | 1110 | WP_224558030.1 | IS110 family transposase | - |
| LOE15_RS22960 (LOE15_22920) | 132276..132656 | - | 381 | Protein_134 | hypothetical protein | - |
| LOE15_RS22965 (LOE15_22925) | 132833..133126 | + | 294 | WP_067297285.1 | hypothetical protein | - |
| LOE15_RS22970 (LOE15_22930) | 133649..134350 | - | 702 | WP_067297288.1 | RES family NAD+ phosphorylase | - |
| LOE15_RS22975 (LOE15_22935) | 134347..134748 | - | 402 | WP_067297291.1 | MbcA/ParS/Xre antitoxin family protein | - |
| LOE15_RS22980 (LOE15_22940) | 134807..135451 | - | 645 | WP_121066445.1 | antitoxin of toxin-antitoxin stability system | - |
| LOE15_RS22985 (LOE15_22945) | 135444..135863 | - | 420 | WP_067297244.1 | hypothetical protein | - |
| LOE15_RS22990 (LOE15_22950) | 135939..136136 | - | 198 | WP_047998245.1 | hypothetical protein | - |
| LOE15_RS22995 (LOE15_22955) | 136138..136515 | - | 378 | WP_114276348.1 | hypothetical protein | - |
| LOE15_RS23000 (LOE15_22960) | 136526..137017 | - | 492 | WP_067297141.1 | hypothetical protein | - |
| LOE15_RS23005 (LOE15_22965) | 137121..137639 | - | 519 | WP_114276373.1 | DNA repair protein RadC | - |
| LOE15_RS23010 (LOE15_22970) | 137749..138189 | - | 441 | WP_114276349.1 | DNA repair protein RadC | - |
| LOE15_RS23015 (LOE15_22975) | 138317..139516 | - | 1200 | WP_121066443.1 | DUF932 domain-containing protein | - |
| LOE15_RS23020 (LOE15_22980) | 139654..140559 | - | 906 | WP_114276002.1 | hypothetical protein | - |
| LOE15_RS23025 (LOE15_22985) | 140599..141195 | + | 597 | WP_037954955.1 | hypothetical protein | - |
| LOE15_RS23030 (LOE15_22990) | 141250..141654 | - | 405 | WP_009827211.1 | single-stranded DNA-binding protein | - |
| LOE15_RS23035 (LOE15_22995) | 142074..142361 | + | 288 | WP_009827212.1 | H-NS histone family protein | - |
| LOE15_RS23040 (LOE15_23000) | 142371..143816 | - | 1446 | WP_114276004.1 | hypothetical protein | - |
| LOE15_RS23045 (LOE15_23005) | 144055..144219 | - | 165 | WP_007803240.1 | hypothetical protein | - |
| LOE15_RS23050 (LOE15_23010) | 144603..145076 | - | 474 | WP_114276003.1 | hypothetical protein | - |
| LOE15_RS23055 (LOE15_23015) | 145176..147353 | - | 2178 | WP_224556256.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE15_RS23060 (LOE15_23020) | 147644..148687 | - | 1044 | WP_114276417.1 | IS5 family transposase | - |
| LOE15_RS23065 (LOE15_23025) | 148753..149910 | - | 1158 | WP_121066480.1 | helix-turn-helix domain-containing protein | - |
| LOE15_RS23070 (LOE15_23030) | 150150..151109 | - | 960 | WP_121066477.1 | plasmid partitioning protein RepB | - |
| LOE15_RS23075 (LOE15_23035) | 151099..152235 | - | 1137 | WP_229940660.1 | plasmid partitioning protein RepA | - |
| LOE15_RS23080 (LOE15_23040) | 152743..153630 | - | 888 | WP_114273238.1 | recombinase family protein | - |
| LOE15_RS23085 (LOE15_23045) | 153835..157173 | + | 3339 | WP_224556255.1 | DEAD/DEAH box helicase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|