MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110565 bp
Accession: NZ_CP086944 Location: 1..110565 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-29 Replicon: plasmid P6
Accession: NZ_CP086944 Location: 1..110565 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-29 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE15_RS21725 (LOE15_21680) | 108..625 | - | 518 | Protein_0 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE15_RS21730 (LOE15_21685) | 622..948 | - | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE15_RS21735 (LOE15_21690) | 1072..1725 | - | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE15_RS21740 (LOE15_21695) | 1725..2417 | - | 693 | WP_224557484.1 | regulator | - |
| LOE15_RS21745 (LOE15_21700) | 2490..4472 | - | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE15_RS21750 (LOE15_21705) | 4940..5970 | - | 1031 | Protein_5 | IS110 family transposase | - |
| LOE15_RS21755 (LOE15_21710) | 6185..6574 | - | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE15_RS21760 (LOE15_21715) | 6662..6934 | - | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE15_RS21765 (LOE15_21720) | 6958..7896 | - | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE15_RS21770 (LOE15_21725) | 7937..8407 | - | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE15_RS21775 (LOE15_21730) | 8760..9053 | + | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE15_RS21780 (LOE15_21735) | 9082..9243 | - | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE15_RS21785 (LOE15_21740) | 9379..10080 | - | 702 | WP_028288616.1 | VIT family protein | - |
| LOE15_RS21790 (LOE15_21745) | 10077..11984 | - | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE15_RS21795 (LOE15_21750) | 11990..12970 | - | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE15_RS21800 (LOE15_21755) | 12951..15158 | - | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE15_RS21805 (LOE15_21760) | 15170..15640 | - | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE15_RS21810 (LOE15_21765) | 15676..16056 | - | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE15_RS21815 (LOE15_21770) | 16237..17622 | - | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE15_RS21820 (LOE15_21775) | 17579..17896 | - | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE15_RS21825 (LOE15_21780) | 18042..18701 | + | 660 | WP_009503873.1 | response regulator transcription factor | - |
| LOE15_RS21830 (LOE15_21785) | 18698..20065 | + | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE15_RS21835 (LOE15_21790) | 20222..21983 | - | 1762 | Protein_22 | ParB N-terminal domain-containing protein | - |
| LOE15_RS21840 (LOE15_21795) | 22152..23363 | - | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE15_RS21845 (LOE15_21800) | 23577..24509 | - | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE15_RS21850 (LOE15_21805) | 24493..25686 | - | 1194 | WP_009503867.1 | plasmid partitioning protein RepA | - |
| LOE15_RS21855 (LOE15_21810) | 25895..26122 | + | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE15_RS21860 (LOE15_21815) | 26112..26507 | + | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE15_RS21865 (LOE15_21820) | 26586..27077 | - | 492 | Protein_28 | recombinase family protein | - |
| LOE15_RS21870 (LOE15_21825) | 27179..28318 | - | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE15_RS21875 (LOE15_21830) | 28445..29329 | + | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE15_RS21880 (LOE15_21835) | 29377..29988 | + | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE15_RS21885 (LOE15_21840) | 31012..31877 | - | 866 | Protein_32 | TniB family NTP-binding protein | - |
| LOE15_RS21890 (LOE15_21845) | 31894..33528 | - | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE15_RS21895 (LOE15_21850) | 33689..34687 | + | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE15_RS21900 (LOE15_21855) | 35015..36196 | - | 1182 | WP_224557529.1 | metal transporter | - |
| LOE15_RS21905 (LOE15_21860) | 36193..37191 | - | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE15_RS21910 (LOE15_21865) | 37518..37970 | + | 453 | WP_054540798.1 | manganese-binding transcriptional regulator MntR | - |
| LOE15_RS21915 (LOE15_21870) | 37965..38414 | - | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE15_RS21920 (LOE15_21875) | 38576..40021 | + | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE15_RS21925 (LOE15_21880) | 40039..40968 | + | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE15_RS21930 (LOE15_21885) | 40968..41462 | + | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE15_RS21935 (LOE15_21890) | 41524..41976 | + | 453 | WP_224557528.1 | cytochrome c | - |
| LOE15_RS21940 (LOE15_21895) | 42268..42930 | + | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE15_RS21945 (LOE15_21900) | 42978..43262 | - | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE15_RS21950 (LOE15_21905) | 43445..45799 | + | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE15_RS21955 (LOE15_21910) | 45834..46100 | + | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE15_RS21960 (LOE15_21915) | 46283..46795 | + | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE15_RS21965 (LOE15_21920) | 47015..48016 | - | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE15_RS21970 (LOE15_21925) | 48013..49914 | - | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE15_RS21975 (LOE15_21930) | 49975..50142 | - | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE15_RS21980 (LOE15_21935) | 50133..51746 | - | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE15_RS21985 (LOE15_21940) | 51713..52171 | - | 459 | WP_224557524.1 | signal peptidase II | - |
| LOE15_RS21990 (LOE15_21945) | 52200..52982 | - | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE15_RS21995 (LOE15_21950) | 52995..53450 | - | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE15_RS22000 (LOE15_21955) | 53454..54827 | - | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE15_RS22005 (LOE15_21960) | 54824..55450 | - | 627 | WP_028095367.1 | SCO family protein | - |
| LOE15_RS22010 (LOE15_21965) | 55450..55917 | - | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE15_RS22015 (LOE15_21970) | 55941..56600 | - | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE15_RS22020 (LOE15_21975) | 56597..57019 | - | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE15_RS22025 (LOE15_21980) | 57025..57591 | - | 567 | WP_028095363.1 | SCO family protein | - |
| LOE15_RS22030 (LOE15_21985) | 57799..58227 | + | 429 | WP_013959865.1 | helix-turn-helix domain-containing protein | - |
| LOE15_RS22035 (LOE15_21990) | 58331..58909 | + | 579 | WP_028095362.1 | cation transporter | - |
| LOE15_RS22040 (LOE15_21995) | 59006..59761 | + | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE15_RS22045 (LOE15_22000) | 59751..60716 | + | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE15_RS22050 (LOE15_22005) | 60858..61058 | + | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE15_RS22055 (LOE15_22010) | 61055..61546 | + | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE15_RS22060 (LOE15_22015) | 61543..62283 | + | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE15_RS22065 (LOE15_22020) | 62384..63148 | - | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE15_RS22070 (LOE15_22025) | 63171..64043 | - | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE15_RS22075 (LOE15_22030) | 64167..64586 | - | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE15_RS22080 (LOE15_22035) | 64606..67113 | - | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE15_RS22085 (LOE15_22040) | 67254..67454 | + | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE15_RS22090 (LOE15_22045) | 67653..68075 | + | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE15_RS22095 (LOE15_22050) | 68370..69833 | + | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE15_RS22100 (LOE15_22055) | 69845..71203 | + | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE15_RS22105 (LOE15_22060) | 71251..71901 | + | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE15_RS22110 (LOE15_22065) | 71885..72667 | + | 783 | Protein_77 | LysR family transcriptional regulator | - |
| LOE15_RS22115 (LOE15_22070) | 72785..74785 | - | 2001 | WP_224557516.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LOE15_RS22120 (LOE15_22075) | 74794..77127 | - | 2334 | WP_224557515.1 | relaxase/mobilization nuclease domain-containing protein | - |
| LOE15_RS22125 (LOE15_22080) | 77114..77671 | - | 558 | WP_224557513.1 | transposase | - |
| LOE15_RS22130 (LOE15_22085) | 78224..78430 | - | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE15_RS22135 (LOE15_22090) | 78969..79898 | - | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE15_RS22140 (LOE15_22095) | 80877..81593 | + | 717 | WP_224557509.1 | methyltransferase | - |
| LOE15_RS22145 (LOE15_22100) | 81629..82396 | - | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE15_RS22150 (LOE15_22105) | 82685..82963 | + | 279 | Protein_85 | transposase | - |
| LOE15_RS22155 (LOE15_22110) | 83124..84569 | + | 1446 | WP_229939271.1 | IS21 family transposase | - |
| LOE15_RS22160 (LOE15_22115) | 84566..85180 | + | 615 | Protein_87 | IS21-like element helper ATPase IstB | - |
| LOE15_RS22165 (LOE15_22120) | 85260..86857 | + | 1598 | Protein_88 | carboxyl transferase domain-containing protein | - |
| LOE15_RS22170 (LOE15_22125) | 86867..87661 | + | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE15_RS22175 (LOE15_22130) | 87658..89661 | + | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE15_RS22180 (LOE15_22135) | 89658..90824 | + | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE15_RS22185 (LOE15_22140) | 91144..91644 | - | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE15_RS22190 (LOE15_22145) | 91807..93009 | + | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE15_RS22195 (LOE15_22150) | 93038..94324 | + | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE15_RS22200 (LOE15_22155) | 94321..94836 | + | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE15_RS22205 (LOE15_22160) | 94902..95669 | + | 768 | WP_211568985.1 | SDR family oxidoreductase | - |
| LOE15_RS22210 (LOE15_22165) | 95666..95992 | + | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE15_RS22215 (LOE15_22170) | 95967..96668 | + | 702 | WP_083416142.1 | TetR/AcrR family transcriptional regulator | - |
| LOE15_RS22220 (LOE15_22175) | 96723..97889 | + | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE15_RS22225 (LOE15_22180) | 97916..98788 | + | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE15_RS22230 (LOE15_22185) | 98781..99839 | + | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE15_RS22235 (LOE15_22190) | 99836..100636 | + | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE15_RS22240 (LOE15_22195) | 100629..101435 | + | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE15_RS22245 (LOE15_22200) | 101443..102297 | + | 855 | WP_224557497.1 | VOC family protein | - |
| LOE15_RS22250 (LOE15_22205) | 102330..103184 | + | 855 | WP_074838803.1 | VOC family protein | - |
| LOE15_RS22255 (LOE15_22210) | 103282..104283 | + | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE15_RS22260 (LOE15_22215) | 104322..105110 | + | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE15_RS22265 (LOE15_22220) | 105115..106050 | + | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE15_RS22270 (LOE15_22225) | 106047..107087 | + | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE15_RS22275 (LOE15_22230) | 107084..107905 | + | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE15_RS22280 | 108086..108478 | - | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE15_RS22290 (LOE15_22245) | 109853..110134 | + | 282 | WP_224557491.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|