MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82231 bp
Accession: NZ_CP086936 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-30 Replicon: plasmid P6
Accession: NZ_CP086936 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-30 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE16_RS22135 (LOE16_22130) | 219..1754 | - | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE16_RS22140 (LOE16_22135) | 2016..3755 | + | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE16_RS22145 (LOE16_22140) | 3766..4671 | + | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE16_RS22150 (LOE16_22145) | 4742..5035 | + | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE16_RS22155 (LOE16_22150) | 5028..5303 | + | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE16_RS22160 (LOE16_22155) | 5772..6542 | - | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE16_RS22165 (LOE16_22160) | 6634..8181 | + | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE16_RS22170 (LOE16_22165) | 8198..9514 | + | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE16_RS22175 (LOE16_22170) | 9514..10692 | + | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE16_RS22180 (LOE16_22175) | 10891..11586 | - | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE16_RS22185 (LOE16_22180) | 11877..12755 | - | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE16_RS22190 (LOE16_22185) | 12752..13807 | - | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE16_RS22195 (LOE16_22190) | 13804..14364 | - | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE16_RS22200 (LOE16_22195) | 14453..15370 | - | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE16_RS22205 (LOE16_22200) | 15407..16333 | - | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE16_RS22210 (LOE16_22205) | 16333..18075 | - | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE16_RS22215 (LOE16_22210) | 18088..19284 | - | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE16_RS22220 (LOE16_22215) | 19297..20817 | - | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE16_RS22225 (LOE16_22220) | 20899..21963 | - | 1065 | WP_224557572.1 | sugar ABC transporter substrate-binding protein | - |
| LOE16_RS22230 (LOE16_22225) | 22132..23064 | + | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
| LOE16_RS22235 (LOE16_22230) | 23154..23456 | + | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE16_RS22240 (LOE16_22235) | 23468..24334 | + | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE16_RS22245 (LOE16_22240) | 24743..25699 | + | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE16_RS22250 (LOE16_22245) | 25829..27352 | + | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE16_RS22255 (LOE16_22250) | 27521..29356 | + | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE16_RS22260 (LOE16_22255) | 29565..30251 | - | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE16_RS22265 (LOE16_22260) | 30248..30955 | - | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE16_RS22270 (LOE16_22265) | 31068..31823 | + | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE16_RS22275 (LOE16_22270) | 32398..33987 | + | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE16_RS22280 (LOE16_22275) | 33984..35420 | + | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE16_RS22285 (LOE16_22280) | 35557..36567 | - | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE16_RS22290 (LOE16_22285) | 37193..38395 | + | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE16_RS22295 (LOE16_22290) | 38392..39372 | + | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE16_RS22300 (LOE16_22295) | 39471..41555 | - | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE16_RS22305 (LOE16_22300) | 41555..42175 | - | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE16_RS22310 (LOE16_22305) | 42366..43616 | + | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE16_RS22315 (LOE16_22310) | 43609..44304 | + | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE16_RS22320 (LOE16_22315) | 44301..45626 | + | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE16_RS22325 (LOE16_22320) | 45668..47122 | + | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE16_RS22330 (LOE16_22325) | 47280..47867 | - | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE16_RS22335 (LOE16_22330) | 48155..48718 | + | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE16_RS22340 (LOE16_22335) | 48879..50852 | + | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE16_RS22345 (LOE16_22340) | 50858..51904 | + | 1047 | WP_081855458.1 | serine protease | - |
| LOE16_RS22350 (LOE16_22345) | 51874..54600 | + | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE16_RS22355 (LOE16_22350) | 54739..55446 | + | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE16_RS22360 (LOE16_22355) | 55455..57128 | + | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE16_RS22365 (LOE16_22360) | 57544..58173 | - | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE16_RS22370 (LOE16_22365) | 58197..59639 | - | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE16_RS22375 (LOE16_22370) | 59665..61350 | - | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE16_RS22380 (LOE16_22375) | 61372..63246 | - | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE16_RS22385 (LOE16_22380) | 63332..64294 | - | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE16_RS22390 (LOE16_22385) | 64561..65313 | + | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE16_RS22395 (LOE16_22390) | 65310..66095 | + | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE16_RS22400 (LOE16_22395) | 66088..66783 | + | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE16_RS22405 (LOE16_22400) | 66799..67515 | + | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE16_RS22410 (LOE16_22405) | 67525..67842 | + | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE16_RS22415 (LOE16_22410) | 67873..69321 | - | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE16_RS22420 (LOE16_22415) | 69318..70082 | - | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE16_RS22425 (LOE16_22420) | 70126..71055 | - | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE16_RS22430 (LOE16_22425) | 71052..72194 | - | 1143 | WP_284145096.1 | ABC transporter substrate-binding protein | - |
| LOE16_RS22435 (LOE16_22430) | 72270..75161 | - | 2892 | WP_224558003.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE16_RS22440 (LOE16_22435) | 75327..75914 | + | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE16_RS22445 (LOE16_22440) | 75993..76811 | - | 819 | Protein_63 | GTP-binding protein | - |
| LOE16_RS22450 (LOE16_22445) | 77150..77392 | - | 243 | WP_229940893.1 | hypothetical protein | - |
| LOE16_RS22455 (LOE16_22450) | 77512..77817 | + | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE16_RS22460 (LOE16_22455) | 77804..78733 | + | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE16_RS22465 (LOE16_22460) | 78964..79392 | - | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE16_RS22470 (LOE16_22465) | 79503..80090 | + | 588 | WP_229940666.1 | TetR/AcrR family transcriptional regulator | - |
| LOE16_RS22475 (LOE16_22470) | 80192..81406 | + | 1215 | WP_224557545.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|