MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37726 bp
Accession: NZ_CP086920 Location: 1..37726 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-32 Replicon: plasmid P1
Accession: NZ_CP086920 Location: 1..37726 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-32 Replicon: plasmid P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE17_RS19260 (LOE17_19240) | 287..775 | + | 489 | WP_229940895.1 | hypothetical protein | - |
| LOE17_RS19265 (LOE17_19245) | 807..1007 | + | 201 | WP_229940896.1 | hypothetical protein | - |
| LOE17_RS19270 (LOE17_19250) | 1164..1763 | - | 600 | WP_012187123.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE17_RS19275 (LOE17_19255) | 1944..3394 | + | 1451 | Protein_4 | Mu transposase C-terminal domain-containing protein | - |
| LOE17_RS19280 (LOE17_19260) | 3391..4215 | + | 825 | WP_224557641.1 | AAA family ATPase | - |
| LOE17_RS19285 (LOE17_19265) | 4347..4976 | + | 630 | WP_224557677.1 | IS91 family transposase ISMno23 | Transposase |
| LOE17_RS19290 (LOE17_19270) | 5039..5223 | + | 185 | Protein_7 | WGR domain-containing protein | - |
| LOE17_RS19295 (LOE17_19275) | 5387..6268 | + | 882 | WP_224557676.1 | hypothetical protein | - |
| LOE17_RS19300 (LOE17_19280) | 6261..7190 | + | 930 | WP_224557674.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| LOE17_RS19305 (LOE17_19285) | 7194..10382 | + | 3189 | WP_224557672.1 | N-6 DNA methylase | - |
| LOE17_RS19310 (LOE17_19290) | 10625..11389 | + | 765 | WP_229940891.1 | Bro-N domain-containing protein | - |
| LOE17_RS19315 (LOE17_19295) | 11564..12448 | - | 885 | WP_224557668.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE17_RS19320 (LOE17_19300) | 12883..13497 | - | 615 | WP_224557666.1 | hypothetical protein | - |
| LOE17_RS19325 (LOE17_19305) | 13925..14317 | - | 393 | WP_224557664.1 | hypothetical protein | - |
| LOE17_RS19330 (LOE17_19310) | 15046..15627 | - | 582 | Protein_15 | Mobilization protein A | Relaxase |
| LOE17_RS19335 (LOE17_19315) | 15862..16149 | + | 288 | WP_224557660.1 | hypothetical protein | - |
| LOE17_RS19340 (LOE17_19320) | 16194..17990 | + | 1797 | WP_229943993.1 | type IV secretory system conjugative DNA transfer family protein | - |
| LOE17_RS19345 (LOE17_19325) | 18205..19239 | + | 1035 | WP_151654626.1 | replication initiator protein A | - |
| LOE17_RS19350 (LOE17_19330) | 19369..20022 | + | 654 | WP_229941983.1 | Protein virC1 | VF |
| LOE17_RS19355 (LOE17_19335) | 20665..20856 | + | 192 | WP_224557658.1 | hypothetical protein | - |
| LOE17_RS19360 (LOE17_19340) | 20890..21933 | + | 1044 | WP_224557657.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE17_RS19365 (LOE17_19345) | 22176..22442 | - | 267 | WP_224557656.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LOE17_RS19370 (LOE17_19350) | 22439..22690 | - | 252 | WP_036743750.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| LOE17_RS19375 (LOE17_19355) | 22797..23483 | - | 687 | WP_224557655.1 | helix-turn-helix transcriptional regulator | - |
| LOE17_RS19380 (LOE17_19360) | 23655..24719 | - | 1065 | WP_224557654.1 | AraC family transcriptional regulator | - |
| LOE17_RS19385 (LOE17_19365) | 25057..26238 | + | 1182 | WP_229940888.1 | ABC transporter substrate-binding protein | - |
| LOE17_RS19390 (LOE17_19370) | 26257..27168 | + | 912 | WP_229940889.1 | branched-chain amino acid ABC transporter permease | - |
| LOE17_RS19395 (LOE17_19375) | 27165..28121 | + | 957 | WP_224557652.1 | branched-chain amino acid ABC transporter permease | - |
| LOE17_RS19400 (LOE17_19380) | 28118..28867 | + | 750 | WP_224557651.1 | ABC transporter ATP-binding protein | - |
| LOE17_RS19405 (LOE17_19385) | 28864..29565 | + | 702 | WP_224557650.1 | ABC transporter ATP-binding protein | - |
| LOE17_RS19410 (LOE17_19390) | 29575..30807 | + | 1233 | WP_224557649.1 | thiolase family protein | - |
| LOE17_RS19415 (LOE17_19395) | 30819..32369 | + | 1551 | WP_224557648.1 | AMP-binding protein | - |
| LOE17_RS19420 (LOE17_19400) | 32379..33878 | + | 1500 | WP_224557647.1 | AMP-binding protein | - |
| LOE17_RS19425 (LOE17_19405) | 33903..35084 | + | 1182 | WP_224557646.1 | lipid-transfer protein | - |
| LOE17_RS19430 (LOE17_19410) | 35099..35890 | + | 792 | WP_224557645.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| LOE17_RS19435 (LOE17_19415) | 36152..36517 | + | 366 | WP_224557644.1 | MerR family transcriptional regulator | - |
| LOE17_RS19440 (LOE17_19420) | 36978..37523 | - | 546 | WP_229997761.1 | LysR family transcriptional regulator substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|