MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 149480 bp
Accession: NZ_CP086903 Location: 1..149480 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-35 Replicon: plasmid P2
Accession: NZ_CP086903 Location: 1..149480 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-35 Replicon: plasmid P2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE19_RS20680 (LOE19_20675) | 1..477 | + | 477 | WP_224557938.1 | MarR family transcriptional regulator | - |
| LOE19_RS20685 (LOE19_20680) | 499..1527 | - | 1029 | WP_224557937.1 | IS30 family transposase ISRssp4 | Transposase |
| LOE19_RS20690 (LOE19_20685) | 1810..2544 | - | 735 | WP_224557936.1 | hypothetical protein | - |
| LOE19_RS20695 (LOE19_20690) | 2642..2923 | - | 282 | WP_224557935.1 | hypothetical protein | - |
| LOE19_RS20700 (LOE19_20695) | 3063..4754 | + | 1692 | WP_224557934.1 | hypothetical protein | - |
| LOE19_RS20705 (LOE19_20700) | 4767..5771 | + | 1005 | WP_224557933.1 | alpha/beta hydrolase family protein | - |
| LOE19_RS20710 (LOE19_20705) | 5845..6048 | - | 204 | WP_229939166.1 | hypothetical protein | - |
| LOE19_RS20715 (LOE19_20710) | 6308..6676 | + | 369 | WP_008327368.1 | hypothetical protein | - |
| LOE19_RS20720 (LOE19_20715) | 6935..7837 | - | 903 | Protein_8 | methyltransferase | - |
| LOE19_RS20725 (LOE19_20720) | 8129..9238 | - | 1110 | WP_224558030.1 | IS110 family transposase ISEc45 | Transposase |
| LOE19_RS20730 (LOE19_20725) | 9340..9663 | - | 324 | Protein_10 | methylase | - |
| LOE19_RS20735 (LOE19_20730) | 9800..10195 | - | 396 | WP_224557987.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| LOE19_RS20740 (LOE19_20735) | 10192..10416 | - | 225 | WP_108693368.1 | transcriptional regulator/antitoxin MazE | - |
| LOE19_RS20745 (LOE19_20740) | 11339..11857 | - | 519 | Protein_13 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE19_RS20750 (LOE19_20745) | 11854..12180 | - | 327 | WP_224557985.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE19_RS20755 (LOE19_20750) | 12304..12957 | - | 654 | WP_224557984.1 | hypothetical protein | - |
| LOE19_RS20760 (LOE19_20755) | 12957..13517 | - | 561 | WP_224557983.1 | regulator | - |
| LOE19_RS20765 (LOE19_20760) | 13591..15573 | - | 1983 | WP_090525078.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE19_RS20770 (LOE19_20765) | 16037..17069 | - | 1033 | Protein_18 | IS110 family transposase ISRhru3 | Transposase |
| LOE19_RS20775 (LOE19_20770) | 17273..17662 | - | 390 | WP_224556806.1 | DUF3768 domain-containing protein | - |
| LOE19_RS20780 (LOE19_20775) | 17767..18690 | - | 924 | WP_224556808.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE19_RS20785 (LOE19_20780) | 19286..20167 | - | 882 | WP_224556810.1 | formyltetrahydrofolate deformylase | - |
| LOE19_RS20790 (LOE19_20785) | 20270..20824 | - | 555 | WP_224556812.1 | sarcosine oxidase subunit gamma | - |
| LOE19_RS20795 (LOE19_20790) | 20817..23762 | - | 2946 | WP_224556814.1 | sarcosine oxidase subunit alpha family protein | - |
| LOE19_RS20800 (LOE19_20795) | 23759..24055 | - | 297 | WP_028957964.1 | sarcosine oxidase subunit delta | - |
| LOE19_RS20805 (LOE19_20800) | 24066..25316 | - | 1251 | WP_224556816.1 | sarcosine oxidase subunit beta family protein | - |
| LOE19_RS20810 (LOE19_20805) | 25428..26411 | + | 984 | WP_037930317.1 | HTH-type transcriptional regulator CdhR | VF |
| LOE19_RS20815 (LOE19_20810) | 26451..27200 | - | 750 | WP_224556817.1 | IclR family transcriptional regulator | - |
| LOE19_RS20820 (LOE19_20815) | 27212..28639 | - | 1428 | WP_224556820.1 | formimidoylglutamate deiminase | - |
| LOE19_RS20825 (LOE19_20820) | 28636..29451 | - | 816 | WP_229940640.1 | N-formylglutamate deformylase | - |
| LOE19_RS20830 (LOE19_20825) | 29594..30571 | + | 978 | WP_037930311.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE19_RS20835 (LOE19_20830) | 30571..31077 | + | 507 | WP_051694641.1 | DUF1850 domain-containing protein | - |
| LOE19_RS20840 (LOE19_20835) | 31074..33305 | + | 2232 | WP_051694640.1 | TRAP transporter permease | - |
| LOE19_RS20845 (LOE19_20840) | 33358..34560 | - | 1203 | WP_224556823.1 | CoA transferase | - |
| LOE19_RS20850 (LOE19_20845) | 34648..35610 | - | 963 | WP_224556825.1 | tripartite tricarboxylate transporter substrate binding protein | - |
| LOE19_RS20855 (LOE19_20850) | 35629..37164 | - | 1536 | WP_224556827.1 | tripartite tricarboxylate transporter permease | - |
| LOE19_RS20860 (LOE19_20855) | 37172..37621 | - | 450 | WP_224556829.1 | tripartite tricarboxylate transporter TctB family protein | - |
| LOE19_RS20865 (LOE19_20860) | 37792..38751 | + | 960 | WP_224556831.1 | LysR family transcriptional regulator | - |
| LOE19_RS20870 (LOE19_20865) | 38902..39960 | + | 1059 | WP_224556832.1 | siderophore-interacting protein | - |
| LOE19_RS20875 (LOE19_20870) | 40001..40972 | + | 972 | WP_224556833.1 | ABC transporter substrate-binding protein | - |
| LOE19_RS20880 (LOE19_20875) | 40969..41970 | + | 1002 | WP_229939097.1 | putative siderophore transport system permease protein YfiZ | VF |
| LOE19_RS20885 (LOE19_20880) | 42039..43013 | + | 975 | WP_229939136.1 | Iron-uptake system permease protein FeuC | VF |
| LOE19_RS20890 (LOE19_20885) | 43010..43840 | + | 831 | WP_224556836.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| LOE19_RS20895 (LOE19_20890) | 44008..46008 | + | 2001 | WP_224556837.1 | TonB-dependent siderophore receptor | - |
| LOE19_RS20900 (LOE19_20895) | 46649..48895 | - | 2247 | WP_224556838.1 | xanthine dehydrogenase family protein molybdopterin-binding subunit | - |
| LOE19_RS20905 (LOE19_20900) | 48888..49943 | - | 1056 | WP_224556839.1 | xanthine dehydrogenase family protein subunit M | - |
| LOE19_RS20910 (LOE19_20905) | 49940..50437 | - | 498 | WP_224556840.1 | (2Fe-2S)-binding protein | - |
| LOE19_RS20915 (LOE19_20910) | 50576..51148 | + | 573 | WP_229939138.1 | TetR/AcrR family transcriptional regulator | - |
| LOE19_RS20920 (LOE19_20915) | 51565..51855 | + | 291 | WP_224556843.1 | hypothetical protein | - |
| LOE19_RS20925 (LOE19_20920) | 52273..53607 | - | 1335 | WP_224556846.1 | type II toxin-antitoxin system HipA family toxin | - |
| LOE19_RS20930 (LOE19_20925) | 53607..53858 | - | 252 | WP_224556848.1 | helix-turn-helix domain-containing protein | - |
| LOE19_RS20935 (LOE19_20930) | 54331..54804 | + | 474 | WP_224556849.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| LOE19_RS20940 (LOE19_20935) | 54990..55748 | + | 759 | WP_224556852.1 | enoyl-CoA hydratase | - |
| LOE19_RS20945 (LOE19_20940) | 55836..56387 | + | 552 | WP_224556854.1 | Protein YrdA | VF |
| LOE19_RS20950 (LOE19_20945) | 56537..58759 | - | 2223 | WP_224556857.1 | PAS-domain containing protein | - |
| LOE19_RS20955 (LOE19_20950) | 58756..59802 | - | 1047 | WP_229939099.1 | FIST N-terminal domain-containing protein | - |
| LOE19_RS20960 (LOE19_20955) | 59989..60690 | - | 702 | WP_224556861.1 | response regulator transcription factor | - |
| LOE19_RS20965 (LOE19_20960) | 60801..62576 | - | 1776 | WP_224556863.1 | PQQ-dependent methanol/ethanol family dehydrogenase | - |
| LOE19_RS20970 (LOE19_20965) | 62764..63741 | + | 978 | WP_224556865.1 | ABC transporter substrate-binding protein | - |
| LOE19_RS20975 (LOE19_20970) | 63747..64421 | + | 675 | WP_224556995.1 | Taurine import ATP-binding protein TauB | VF |
| LOE19_RS20980 (LOE19_20975) | 64361..64897 | - | 537 | WP_224556869.1 | hypothetical protein | VF |
| LOE19_RS20985 (LOE19_20980) | 64932..65723 | - | 792 | WP_224556871.1 | ABC transporter permease | - |
| LOE19_RS20990 (LOE19_20985) | 65720..66436 | - | 717 | WP_224556875.1 | putative ABC transporter ATP-binding protein YadG | VF |
| LOE19_RS20995 (LOE19_20990) | 66433..66882 | - | 450 | WP_224556878.1 | hypothetical protein | - |
| LOE19_RS21000 (LOE19_20995) | 66900..67859 | - | 960 | WP_224556880.1 | YVTN family beta-propeller repeat protein | - |
| LOE19_RS21005 (LOE19_21000) | 67856..68986 | - | 1131 | WP_224556882.1 | ABC transporter substrate-binding protein | - |
| LOE19_RS21010 (LOE19_21005) | 69176..69874 | + | 699 | WP_224556885.1 | cytochrome c-550 PedF | - |
| LOE19_RS21015 (LOE19_21010) | 69909..70781 | + | 873 | WP_224556997.1 | transporter substrate-binding domain-containing protein | - |
| LOE19_RS21020 (LOE19_21015) | 70931..71416 | + | 486 | WP_224556887.1 | (2Fe-2S)-binding protein | - |
| LOE19_RS21025 (LOE19_21020) | 71438..73810 | + | 2373 | WP_224556889.1 | xanthine dehydrogenase family protein molybdopterin-binding subunit | - |
| LOE19_RS21030 (LOE19_21025) | 73821..74603 | + | 783 | WP_224556891.1 | xanthine dehydrogenase family protein subunit M | - |
| LOE19_RS21035 (LOE19_21030) | 74668..75540 | - | 873 | WP_224556893.1 | FAD:protein FMN transferase | - |
| LOE19_RS21040 (LOE19_21035) | 75537..77618 | - | 2082 | WP_224556895.1 | 4Fe-4S binding protein | - |
| LOE19_RS21045 (LOE19_21040) | 77742..78518 | + | 777 | WP_224556896.1 | ABC transporter permease | - |
| LOE19_RS21050 (LOE19_21045) | 78515..79201 | - | 687 | WP_224556898.1 | vWA domain-containing protein | - |
| LOE19_RS21055 (LOE19_21050) | 79217..80302 | - | 1086 | WP_224556900.1 | pyrroloquinoline quinone biosynthesis protein PqqE | - |
| LOE19_RS21060 (LOE19_21055) | 80286..80564 | - | 279 | WP_224556902.1 | pyrroloquinoline quinone biosynthesis peptide chaperone PqqD | - |
| LOE19_RS21065 (LOE19_21060) | 80564..81307 | - | 744 | WP_224556903.1 | pyrroloquinoline-quinone synthase PqqC | - |
| LOE19_RS21070 (LOE19_21065) | 81304..82191 | - | 888 | WP_224556905.1 | pyrroloquinoline quinone biosynthesis protein PqqB | - |
| LOE19_RS21075 (LOE19_21070) | 82205..82312 | - | 108 | WP_224556908.1 | pyrroloquinoline quinone precursor peptide PqqA | - |
| LOE19_RS21080 (LOE19_21075) | 82483..82878 | + | 396 | WP_224556911.1 | cytochrome c family protein | - |
| LOE19_RS21085 (LOE19_21080) | 82892..83413 | + | 522 | WP_224556913.1 | carbon monoxide dehydrogenase subunit G | - |
| LOE19_RS21090 (LOE19_21085) | 83715..84602 | - | 888 | WP_224556916.1 | LysR family transcriptional regulator | - |
| LOE19_RS21095 (LOE19_21090) | 84703..85314 | + | 612 | WP_224556921.1 | glutathione transferase GstA | - |
| LOE19_RS21100 (LOE19_21095) | 85311..85691 | + | 381 | WP_224556923.1 | nuclear transport factor 2 family protein | - |
| LOE19_RS21105 (LOE19_21100) | 85695..85913 | + | 219 | WP_224556926.1 | 4-oxalocrotonate tautomerase family protein | - |
| LOE19_RS21110 (LOE19_21105) | 86294..87775 | - | 1482 | WP_224556929.1 | sodium:solute symporter family protein | - |
| LOE19_RS21115 (LOE19_21110) | 87772..87957 | - | 186 | WP_224556932.1 | hypothetical protein | - |
| LOE19_RS21120 (LOE19_21115) | 88074..88697 | - | 624 | WP_224556935.1 | isochorismatase family protein | - |
| LOE19_RS21125 (LOE19_21120) | 88719..89750 | - | 1032 | WP_224556938.1 | leucyl aminopeptidase | - |
| LOE19_RS21130 (LOE19_21125) | 89778..90560 | - | 783 | WP_224556941.1 | alpha/beta hydrolase | - |
| LOE19_RS21135 (LOE19_21130) | 90572..91273 | - | 702 | WP_224557001.1 | maleate isomerase | - |
| LOE19_RS21140 (LOE19_21135) | 91434..92102 | - | 669 | WP_224556944.1 | HTH-type transcriptional repressor | VF |
| LOE19_RS21145 (LOE19_21140) | 92110..92574 | - | 465 | WP_224556946.1 | MarR family transcriptional regulator | - |
| LOE19_RS21150 (LOE19_21145) | 92870..93382 | + | 513 | WP_224556948.1 | (2Fe-2S)-binding protein | - |
| LOE19_RS21155 (LOE19_21150) | 93379..96792 | + | 3414 | WP_224556949.1 | molybdopterin-dependent oxidoreductase | - |
| LOE19_RS21160 (LOE19_21155) | 96986..98119 | + | 1134 | WP_224557003.1 | FAD-dependent monooxygenase | - |
| LOE19_RS21165 (LOE19_21160) | 98107..98243 | - | 137 | Protein_97 | IS481 family transposase | - |
| LOE19_RS21170 (LOE19_21165) | 98295..99962 | - | 1668 | WP_224556950.1 | sulfatase-like hydrolase/transferase | - |
| LOE19_RS21175 (LOE19_21170) | 100025..100381 | - | 357 | WP_224556951.1 | hypothetical protein | - |
| LOE19_RS21180 (LOE19_21175) | 100623..101114 | - | 492 | WP_224557005.1 | 3-keto-5-aminohexanoate cleavage protein | - |
| LOE19_RS21185 (LOE19_21180) | 101280..102224 | + | 945 | Protein_101 | IS110 family transposase ISWpi13 | Transposase |
| LOE19_RS21190 (LOE19_21185) | 102225..103136 | + | 912 | Protein_102 | IS3 family transposase ISXau3 | Transposase |
| LOE19_RS21195 (LOE19_21190) | 103768..104019 | + | 252 | WP_224556953.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| LOE19_RS21200 (LOE19_21195) | 104016..104282 | + | 267 | WP_224556955.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| LOE19_RS21205 | 104343..105161 | - | 819 | WP_229940646.1 | hypothetical protein | - |
| LOE19_RS21210 (LOE19_21205) | 105252..105955 | + | 704 | Protein_106 | IS6 family transposase ISRH1 | Transposase |
| LOE19_RS21215 (LOE19_21210) | 106173..107054 | - | 882 | WP_224556958.1 | zinc-binding dehydrogenase | - |
| LOE19_RS21220 (LOE19_21215) | 108884..109939 | - | 1056 | WP_224556960.1 | plasmid replication protein RepC | - |
| LOE19_RS21225 (LOE19_21220) | 110178..111149 | - | 972 | WP_224556962.1 | plasmid partitioning protein RepB | - |
| LOE19_RS21230 (LOE19_21225) | 111149..112348 | - | 1200 | WP_037930394.1 | Cell division protein PomZ | VF |
| LOE19_RS21235 (LOE19_21230) | 112831..112989 | - | 159 | Protein_111 | short-chain dehydrogenase | - |
| LOE19_RS21240 (LOE19_21235) | 113077..114174 | - | 1098 | WP_229939103.1 | glycoside hydrolase family 88 protein | - |
| LOE19_RS21245 (LOE19_21240) | 114206..115273 | - | 1068 | WP_224556967.1 | TRAP transporter substrate-binding protein | - |
| LOE19_RS21250 (LOE19_21245) | 115581..116081 | + | 501 | WP_224556969.1 | TRAP transporter small permease | - |
| LOE19_RS21255 (LOE19_21250) | 116104..117411 | + | 1308 | WP_229939144.1 | TRAP transporter large permease | - |
| LOE19_RS21260 (LOE19_21255) | 117425..118165 | + | 741 | WP_224556975.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| LOE19_RS21265 (LOE19_21260) | 118170..119186 | - | 1017 | WP_224556977.1 | LacI family DNA-binding transcriptional regulator | - |
| LOE19_RS21270 (LOE19_21265) | 119429..120265 | + | 837 | WP_224556979.1 | 5-dehydro-4-deoxy-D-glucuronate isomerase | - |
| LOE19_RS21275 (LOE19_21270) | 120269..122728 | + | 2460 | WP_224556981.1 | hypothetical protein | - |
| LOE19_RS21280 (LOE19_21275) | 123206..123796 | + | 591 | WP_229939111.1 | NAD(P)H-dependent oxidoreductase | - |
| LOE19_RS21285 (LOE19_21280) | 124513..125397 | + | 885 | WP_224556983.1 | DUF1403 family protein | - |
| LOE19_RS21290 (LOE19_21285) | 125400..126014 | + | 615 | WP_224556984.1 | SMC-Scp complex subunit ScpB | - |
| LOE19_RS21295 (LOE19_21290) | 126115..126330 | + | 216 | WP_224556986.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LOE19_RS21300 (LOE19_21295) | 126357..126860 | + | 504 | WP_224556988.1 | type II toxin-antitoxin system VapC family toxin | - |
| LOE19_RS21305 (LOE19_21300) | 126754..127466 | + | 713 | Protein_125 | IS6 family transposase | - |
| LOE19_RS21310 (LOE19_21305) | 127752..127925 | - | 174 | WP_229939113.1 | DDE-type integrase/transposase/recombinase | - |
| LOE19_RS21315 (LOE19_21310) | 129700..130089 | - | 390 | WP_224556990.1 | helix-turn-helix domain-containing protein | - |
| LOE19_RS21320 (LOE19_21315) | 130510..130614 | + | 105 | WP_229939115.1 | hypothetical protein | - |
| LOE19_RS21325 | 130724..131026 | - | 303 | WP_224556991.1 | hypothetical protein | - |
| LOE19_RS21330 (LOE19_21325) | 131141..132025 | + | 885 | WP_224556992.1 | DUF1403 family protein | - |
| LOE19_RS21335 (LOE19_21330) | 132028..132621 | + | 594 | WP_224556993.1 | SMC-Scp complex subunit ScpB | - |
| LOE19_RS21340 (LOE19_21335) | 132907..133185 | + | 279 | WP_229939064.1 | IS66 family transposase ISSme3 | Transposase |
| LOE19_RS21345 (LOE19_21340) | 133182..133529 | + | 348 | WP_224558021.1 | IS66 family transposase ISAzs18 | Transposase |
| LOE19_RS21350 (LOE19_21345) | 133608..135134 | + | 1527 | WP_224558022.1 | IS66 family transposase ISAzs18 | Transposase |
| LOE19_RS21355 (LOE19_21350) | 135349..135456 | + | 108 | Protein_135 | transposase | - |
| LOE19_RS21360 (LOE19_21355) | 137094..137648 | + | 555 | WP_224558005.1 | hypothetical protein | - |
| LOE19_RS21365 (LOE19_21360) | 138204..138392 | + | 189 | WP_224558006.1 | Flp family type IVb pilin | - |
| LOE19_RS21370 (LOE19_21365) | 138438..139358 | + | 921 | WP_229940643.1 | Flp pilus assembly protein CpaB | - |
| LOE19_RS21375 (LOE19_21370) | 139380..140630 | + | 1251 | WP_229997156.1 | putative type IV piliation system protein | VF |
| LOE19_RS21380 (LOE19_21375) | 140736..141275 | + | 540 | WP_224557980.1 | CpaD family pilus assembly protein | - |
| LOE19_RS21385 (LOE19_21380) | 141297..142538 | + | 1242 | WP_224557981.1 | hypothetical protein | - |
| LOE19_RS21390 (LOE19_21385) | 142531..144075 | + | 1545 | WP_037925008.1 | Putative conjugal transfer protein | VF |
| LOE19_RS21395 (LOE19_21390) | 144072..145040 | + | 969 | WP_224557982.1 | hypothetical protein | VF |
| LOE19_RS21400 (LOE19_21395) | 145042..145992 | + | 951 | WP_229939089.1 | type II secretion system F family protein | - |
| LOE19_RS21405 (LOE19_21400) | 145989..146411 | + | 423 | WP_224557940.1 | pilus assembly protein | - |
| LOE19_RS21410 (LOE19_21405) | 146401..148176 | + | 1776 | WP_224557939.1 | pilus assembly protein TadG-related protein | - |
| LOE19_RS21415 (LOE19_21410) | 148223..149029 | + | 807 | WP_051539349.1 | Beta-barrel assembly-enhancing protease | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|