MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110568 bp
Accession: NZ_CP086897 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-37 Replicon: plasmid P3
Accession: NZ_CP086897 Location: 1..110568 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-37 Replicon: plasmid P3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE20_RS20945 (LOE20_20950) | 553..1584 | + | 1032 | WP_224558028.1 | IS110 family transposase ISRhru3 | Transposase |
| LOE20_RS20950 (LOE20_20955) | 2052..4034 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE20_RS20955 (LOE20_20960) | 4107..4799 | + | 693 | WP_224557484.1 | regulator | - |
| LOE20_RS20960 (LOE20_20965) | 4799..5452 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE20_RS20965 (LOE20_20970) | 5576..5902 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE20_RS20970 (LOE20_20975) | 5899..6416 | + | 518 | Protein_6 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE20_RS20975 (LOE20_20980) | 6955..7236 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE20_RS20980 (LOE20_20985) | 7455..8584 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRosp1 | Transposase |
| LOE20_RS20985 (LOE20_20990) | 8611..9003 | + | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE20_RS20990 (LOE20_20995) | 9184..10005 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE20_RS20995 (LOE20_21000) | 10002..11042 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE20_RS21000 (LOE20_21005) | 11039..11974 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE20_RS21005 (LOE20_21010) | 11979..12767 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE20_RS21010 (LOE20_21015) | 12806..13807 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE20_RS21015 (LOE20_21020) | 13905..14759 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE20_RS21020 (LOE20_21025) | 14792..15646 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE20_RS21025 (LOE20_21030) | 15654..16460 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE20_RS21030 (LOE20_21035) | 16453..17253 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE20_RS21035 (LOE20_21040) | 17250..18308 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE20_RS21040 (LOE20_21045) | 18301..19173 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE20_RS21045 (LOE20_21050) | 19200..20366 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE20_RS21050 (LOE20_21055) | 20421..21107 | - | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE20_RS21055 (LOE20_21060) | 21097..21423 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE20_RS21060 (LOE20_21065) | 21420..22187 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE20_RS21065 (LOE20_21070) | 22253..22762 | - | 510 | WP_229997169.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE20_RS21070 (LOE20_21075) | 22765..24051 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE20_RS21075 (LOE20_21080) | 24080..25282 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE20_RS21080 (LOE20_21085) | 25445..25945 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE20_RS21085 (LOE20_21090) | 26265..27431 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE20_RS21090 (LOE20_21095) | 27428..29431 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE20_RS21095 (LOE20_21100) | 29428..30222 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE20_RS21100 (LOE20_21105) | 30232..31830 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE20_RS21105 (LOE20_21110) | 31910..32524 | - | 615 | Protein_33 | IS21 family transposase ISPve1 | Transposase |
| LOE20_RS21110 (LOE20_21115) | 32521..33966 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE20_RS21115 (LOE20_21120) | 34127..34405 | - | 279 | Protein_35 | IS1595 family transposase ISOan10 | Transposase |
| LOE20_RS21120 (LOE20_21125) | 34694..35461 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE20_RS21125 (LOE20_21130) | 35497..36213 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE20_RS21130 (LOE20_21135) | 37192..38121 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE20_RS21135 (LOE20_21140) | 38660..38866 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE20_RS21140 (LOE20_21145) | 39419..39976 | + | 558 | WP_224557513.1 | transposase | - |
| LOE20_RS21145 (LOE20_21150) | 39963..42296 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE20_RS21150 (LOE20_21155) | 42305..44305 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE20_RS21155 (LOE20_21160) | 44423..45205 | - | 783 | Protein_43 | LysR family transcriptional regulator | - |
| LOE20_RS21160 (LOE20_21165) | 45189..45839 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE20_RS21165 (LOE20_21170) | 45887..47245 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE20_RS21170 (LOE20_21175) | 47257..48720 | - | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE20_RS21175 (LOE20_21180) | 49015..49437 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE20_RS21180 (LOE20_21185) | 49636..49836 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE20_RS21185 (LOE20_21190) | 49977..52484 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE20_RS21190 (LOE20_21195) | 52504..52923 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE20_RS21195 (LOE20_21200) | 53047..53919 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE20_RS21200 (LOE20_21205) | 53942..54706 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE20_RS21205 (LOE20_21210) | 54807..55547 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE20_RS21210 (LOE20_21215) | 55544..56035 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE20_RS21215 (LOE20_21220) | 56032..56232 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE20_RS21220 (LOE20_21225) | 56374..57339 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE20_RS21225 (LOE20_21230) | 57329..58084 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE20_RS21230 (LOE20_21235) | 58181..58759 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE20_RS21235 (LOE20_21240) | 58863..59291 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE20_RS21240 (LOE20_21245) | 59463..60065 | + | 603 | WP_224557520.1 | SCO family protein | - |
| LOE20_RS21245 (LOE20_21250) | 60071..60493 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE20_RS21250 (LOE20_21255) | 60490..61149 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE20_RS21255 (LOE20_21260) | 61173..61640 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE20_RS21260 (LOE20_21265) | 61640..62266 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE20_RS21265 (LOE20_21270) | 62263..63636 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE20_RS21270 (LOE20_21275) | 63640..64095 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE20_RS21275 (LOE20_21280) | 64108..64890 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE20_RS21280 (LOE20_21285) | 64919..65377 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE20_RS21285 (LOE20_21290) | 65344..66957 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE20_RS21290 (LOE20_21295) | 66948..67115 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE20_RS21295 (LOE20_21300) | 67176..69077 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE20_RS21300 (LOE20_21305) | 69074..70075 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE20_RS21305 (LOE20_21310) | 70295..70807 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE20_RS21310 (LOE20_21315) | 70990..71256 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE20_RS21315 (LOE20_21320) | 71291..73645 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE20_RS21320 (LOE20_21325) | 73828..74112 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE20_RS21325 (LOE20_21330) | 74160..74822 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE20_RS21330 (LOE20_21335) | 75114..75566 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE20_RS21335 (LOE20_21340) | 75628..76122 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE20_RS21340 (LOE20_21345) | 76122..77051 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE20_RS21345 (LOE20_21350) | 77069..78514 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE20_RS21350 (LOE20_21355) | 78676..79125 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE20_RS21355 (LOE20_21360) | 79120..79572 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE20_RS21360 (LOE20_21365) | 79899..80897 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE20_RS21365 (LOE20_21370) | 80894..82075 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE20_RS21370 (LOE20_21375) | 82403..83401 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE20_RS21375 (LOE20_21380) | 83562..85196 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE20_RS21380 (LOE20_21385) | 85213..86079 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE20_RS21385 (LOE20_21390) | 87103..87714 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE20_RS21390 (LOE20_21395) | 87762..88646 | - | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE20_RS21395 (LOE20_21400) | 88761..89912 | + | 1152 | WP_224557873.1 | tyrosine-type recombinase/integrase | - |
| LOE20_RS21400 (LOE20_21405) | 90014..90505 | + | 492 | Protein_92 | recombinase family protein | - |
| LOE20_RS21405 (LOE20_21410) | 90584..90979 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE20_RS21410 (LOE20_21415) | 90969..91196 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE20_RS21415 (LOE20_21420) | 91405..92598 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE20_RS21420 (LOE20_21425) | 92582..93514 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE20_RS21425 (LOE20_21430) | 93728..94939 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE20_RS21430 (LOE20_21435) | 95108..96869 | + | 1762 | Protein_98 | ParB N-terminal domain-containing protein | - |
| LOE20_RS21435 (LOE20_21440) | 97026..98393 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE20_RS21440 (LOE20_21445) | 98390..99049 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE20_RS21445 (LOE20_21450) | 99195..99512 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE20_RS21450 (LOE20_21455) | 99469..100854 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE20_RS21455 (LOE20_21460) | 101035..101415 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE20_RS21460 (LOE20_21465) | 101451..101921 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE20_RS21465 (LOE20_21470) | 101933..104140 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE20_RS21470 (LOE20_21475) | 104121..105101 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE20_RS21475 (LOE20_21480) | 105107..107014 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE20_RS21480 (LOE20_21485) | 107011..107712 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE20_RS21485 (LOE20_21490) | 107848..108009 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE20_RS21490 (LOE20_21495) | 108038..108331 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE20_RS21495 (LOE20_21500) | 108684..109154 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE20_RS21500 (LOE20_21505) | 109195..110133 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE20_RS21505 (LOE20_21510) | 110157..110429 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|