MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110560 bp
Accession: NZ_CP086891 Location: 1..110560 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-67 Replicon: plasmid P5
Accession: NZ_CP086891 Location: 1..110560 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-67 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE21_RS21725 (LOE21_21725) | 109..626 | - | 518 | Protein_0 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE21_RS21730 (LOE21_21730) | 623..949 | - | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE21_RS21735 (LOE21_21735) | 1073..1726 | - | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE21_RS21740 (LOE21_21740) | 1726..2418 | - | 693 | WP_224557484.1 | regulator | - |
| LOE21_RS21745 (LOE21_21745) | 2491..4473 | - | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE21_RS21750 (LOE21_21750) | 4941..5967 | - | 1027 | Protein_5 | IS110 family transposase ISRhru3 | Transposase |
| LOE21_RS21755 (LOE21_21755) | 6182..6571 | - | 390 | WP_224557867.1 | DUF3768 domain-containing protein | - |
| LOE21_RS21760 (LOE21_21760) | 6659..6931 | - | 273 | WP_224557869.1 | DUF6330 family protein | - |
| LOE21_RS21765 (LOE21_21765) | 6955..7893 | - | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE21_RS21770 (LOE21_21770) | 7934..8404 | - | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE21_RS21775 (LOE21_21775) | 8757..9050 | + | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE21_RS21780 (LOE21_21780) | 9079..9240 | - | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE21_RS21785 (LOE21_21785) | 9376..10077 | - | 702 | WP_028288616.1 | VIT family protein | - |
| LOE21_RS21790 (LOE21_21790) | 10074..11981 | - | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE21_RS21795 (LOE21_21795) | 11987..12967 | - | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE21_RS21800 (LOE21_21800) | 12948..15155 | - | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE21_RS21805 (LOE21_21805) | 15167..15637 | - | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE21_RS21810 (LOE21_21810) | 15673..16053 | - | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE21_RS21815 (LOE21_21815) | 16234..17619 | - | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE21_RS21820 (LOE21_21820) | 17576..17893 | - | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE21_RS21825 (LOE21_21825) | 18039..18698 | + | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE21_RS21830 (LOE21_21830) | 18695..20062 | + | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE21_RS21835 (LOE21_21835) | 20219..21980 | - | 1762 | Protein_22 | ParB N-terminal domain-containing protein | - |
| LOE21_RS21840 (LOE21_21840) | 22149..23360 | - | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE21_RS21845 (LOE21_21845) | 23574..24506 | - | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE21_RS21850 (LOE21_21850) | 24490..25683 | - | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE21_RS21855 (LOE21_21855) | 25892..26119 | + | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE21_RS21860 (LOE21_21860) | 26109..26504 | + | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE21_RS21865 (LOE21_21865) | 26583..27074 | - | 492 | Protein_28 | recombinase family protein | - |
| LOE21_RS21870 (LOE21_21870) | 27176..28327 | - | 1152 | WP_224557873.1 | tyrosine-type recombinase/integrase | - |
| LOE21_RS21875 (LOE21_21875) | 28442..29326 | + | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE21_RS21880 (LOE21_21880) | 29374..29985 | + | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE21_RS21885 (LOE21_21885) | 31009..31873 | - | 865 | Protein_32 | TniB family NTP-binding protein | - |
| LOE21_RS21890 (LOE21_21890) | 31890..33524 | - | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE21_RS21895 (LOE21_21895) | 33685..34683 | + | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE21_RS21900 (LOE21_21900) | 35011..36192 | - | 1182 | WP_224557529.1 | metal transporter | - |
| LOE21_RS21905 (LOE21_21905) | 36189..37187 | - | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE21_RS21910 (LOE21_21910) | 37514..37966 | + | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE21_RS21915 | 38091..38435 | + | 345 | WP_054540799.1 | hypothetical protein | - |
| LOE21_RS21920 (LOE21_21920) | 38572..40017 | + | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE21_RS21925 (LOE21_21925) | 40035..40964 | + | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE21_RS21930 (LOE21_21930) | 40964..41458 | + | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE21_RS21935 (LOE21_21935) | 41520..41972 | + | 453 | WP_224557528.1 | cytochrome c | - |
| LOE21_RS21940 (LOE21_21940) | 42264..42926 | + | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE21_RS21945 (LOE21_21945) | 42974..43258 | - | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE21_RS21950 (LOE21_21950) | 43441..45795 | + | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE21_RS21955 (LOE21_21955) | 45830..46096 | + | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE21_RS21960 (LOE21_21960) | 46279..46791 | + | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE21_RS21965 (LOE21_21965) | 47011..48012 | - | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE21_RS21970 (LOE21_21970) | 48009..49910 | - | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE21_RS21975 (LOE21_21975) | 49971..50138 | - | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE21_RS21980 (LOE21_21980) | 50129..51742 | - | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE21_RS21985 (LOE21_21985) | 51709..52167 | - | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE21_RS21990 (LOE21_21990) | 52196..52978 | - | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE21_RS21995 (LOE21_21995) | 52991..53446 | - | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE21_RS22000 (LOE21_22000) | 53450..54823 | - | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE21_RS22005 (LOE21_22005) | 54820..55446 | - | 627 | WP_028095367.1 | SCO family protein | - |
| LOE21_RS22010 (LOE21_22010) | 55446..55913 | - | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE21_RS22015 (LOE21_22015) | 55937..56596 | - | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE21_RS22020 (LOE21_22020) | 56593..57015 | - | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE21_RS22025 (LOE21_22025) | 57021..57587 | - | 567 | WP_028095363.1 | SCO family protein | - |
| LOE21_RS22030 (LOE21_22030) | 57795..58223 | + | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE21_RS22035 (LOE21_22035) | 58327..58905 | + | 579 | WP_028095362.1 | cation transporter | - |
| LOE21_RS22040 (LOE21_22040) | 59002..59757 | + | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE21_RS22045 (LOE21_22045) | 59747..60712 | + | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE21_RS22050 (LOE21_22050) | 60854..61054 | + | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE21_RS22055 (LOE21_22055) | 61051..61542 | + | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE21_RS22060 (LOE21_22060) | 61539..62279 | + | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE21_RS22065 (LOE21_22065) | 62380..63144 | - | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE21_RS22070 (LOE21_22070) | 63167..64039 | - | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE21_RS22075 (LOE21_22075) | 64163..64582 | - | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE21_RS22080 (LOE21_22080) | 64602..67109 | - | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE21_RS22085 (LOE21_22085) | 67250..67450 | + | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE21_RS22090 (LOE21_22090) | 67649..68071 | + | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE21_RS22095 (LOE21_22095) | 68366..69829 | + | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE21_RS22100 (LOE21_22100) | 69841..71199 | + | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE21_RS22105 (LOE21_22105) | 71247..71897 | + | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE21_RS22110 (LOE21_22110) | 71881..72663 | + | 783 | Protein_77 | LysR family transcriptional regulator | - |
| LOE21_RS22115 (LOE21_22115) | 72781..74781 | - | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE21_RS22120 (LOE21_22120) | 74790..77123 | - | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE21_RS22125 (LOE21_22125) | 77110..77667 | - | 558 | WP_224557513.1 | transposase | - |
| LOE21_RS22130 (LOE21_22130) | 78220..78426 | - | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE21_RS22135 (LOE21_22135) | 78965..79894 | - | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE21_RS22140 (LOE21_22140) | 80873..81589 | + | 717 | WP_224557509.1 | methyltransferase | - |
| LOE21_RS22145 (LOE21_22145) | 81625..82392 | - | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE21_RS22150 (LOE21_22150) | 82681..82959 | + | 279 | Protein_85 | transposase | - |
| LOE21_RS22155 (LOE21_22155) | 83120..84565 | + | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE21_RS22160 (LOE21_22160) | 84562..85176 | + | 615 | Protein_87 | IS21 family transposase ISPve1 | Transposase |
| LOE21_RS22165 (LOE21_22165) | 85256..86852 | + | 1597 | Protein_88 | carboxyl transferase domain-containing protein | - |
| LOE21_RS22170 (LOE21_22170) | 86862..87656 | + | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE21_RS22175 (LOE21_22175) | 87653..89656 | + | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE21_RS22180 (LOE21_22180) | 89653..90819 | + | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE21_RS22185 (LOE21_22185) | 91139..91639 | - | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE21_RS22190 (LOE21_22190) | 91802..93004 | + | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE21_RS22195 (LOE21_22195) | 93033..94319 | + | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE21_RS22200 (LOE21_22200) | 94316..94831 | + | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE21_RS22205 (LOE21_22205) | 94897..95664 | + | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE21_RS22210 (LOE21_22210) | 95661..95987 | + | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE21_RS22215 (LOE21_22215) | 95977..96663 | + | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE21_RS22220 (LOE21_22220) | 96718..97884 | + | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE21_RS22225 (LOE21_22225) | 97911..98783 | + | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE21_RS22230 (LOE21_22230) | 98776..99834 | + | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE21_RS22235 (LOE21_22235) | 99831..100631 | + | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE21_RS22240 (LOE21_22240) | 100624..101430 | + | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE21_RS22245 (LOE21_22245) | 101438..102292 | + | 855 | WP_224557497.1 | VOC family protein | - |
| LOE21_RS22250 (LOE21_22250) | 102325..103179 | + | 855 | WP_074838803.1 | VOC family protein | - |
| LOE21_RS22255 (LOE21_22255) | 103277..104278 | + | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE21_RS22260 (LOE21_22260) | 104317..105105 | + | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE21_RS22265 (LOE21_22265) | 105110..106045 | + | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE21_RS22270 (LOE21_22270) | 106042..107082 | + | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE21_RS22275 (LOE21_22275) | 107079..107900 | + | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE21_RS22280 (LOE21_22280) | 108354..108503 | + | 150 | WP_224557495.1 | hypothetical protein | - |
| LOE21_RS22290 (LOE21_22290) | 109848..110129 | + | 282 | WP_224557491.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|