NZ_CP0868881..168033

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 168033 bp
Accession: NZ_CP086888        Location: 1..168033         Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-67       Replicon: plasmid P2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LOE21_RS19560 (LOE21_19560) 101..619 - 519 Protein_0 type II toxin-antitoxin system YhaV family toxin -
LOE21_RS19565 (LOE21_19565) 616..942 - 327 WP_224557985.1 type II toxin-antitoxin system PrlF family antitoxin -
LOE21_RS19570 (LOE21_19570) 1066..1719 - 654 WP_224557984.1 hypothetical protein -
LOE21_RS19575 (LOE21_19575) 1719..2279 - 561 WP_224557983.1 regulator -
LOE21_RS19580 (LOE21_19580) 2353..4335 - 1983 WP_090525078.1 ParB/RepB/Spo0J family partition protein -
LOE21_RS19585 (LOE21_19585) 4799..5830 - 1032 WP_224558028.1 IS110 family transposase ISRhru3 Transposase
LOE21_RS19590 (LOE21_19590) 6034..6423 - 390 WP_224556806.1 DUF3768 domain-containing protein -
LOE21_RS19595 (LOE21_19595) 6528..7451 - 924 WP_224556808.1 zincin-like metallopeptidase domain-containing protein -
LOE21_RS19600 (LOE21_19600) 8047..8928 - 882 WP_224556810.1 formyltetrahydrofolate deformylase -
LOE21_RS19605 (LOE21_19605) 9031..9585 - 555 WP_224556812.1 sarcosine oxidase subunit gamma -
LOE21_RS19610 (LOE21_19610) 9578..12523 - 2946 WP_224556814.1 sarcosine oxidase subunit alpha family protein -
LOE21_RS19615 (LOE21_19615) 12520..12816 - 297 WP_028957964.1 sarcosine oxidase subunit delta -
LOE21_RS19620 (LOE21_19620) 12827..14077 - 1251 WP_224556816.1 sarcosine oxidase subunit beta family protein -
LOE21_RS19625 (LOE21_19625) 14189..15172 + 984 WP_037930317.1 HTH-type transcriptional regulator CdhR VF
LOE21_RS19630 (LOE21_19630) 15212..15961 - 750 WP_224556817.1 IclR family transcriptional regulator -
LOE21_RS19635 (LOE21_19635) 15973..17400 - 1428 WP_224556820.1 formimidoylglutamate deiminase -
LOE21_RS19640 (LOE21_19640) 17397..18212 - 816 WP_229940640.1 N-formylglutamate deformylase -
LOE21_RS19645 (LOE21_19645) 18355..19332 + 978 WP_037930311.1 TAXI family TRAP transporter solute-binding subunit -
LOE21_RS19650 (LOE21_19650) 19332..19838 + 507 WP_051694641.1 DUF1850 domain-containing protein -
LOE21_RS19655 (LOE21_19655) 19835..22066 + 2232 WP_051694640.1 TRAP transporter permease -
LOE21_RS19660 (LOE21_19660) 22119..23321 - 1203 WP_224556823.1 CoA transferase -
LOE21_RS19665 (LOE21_19665) 23409..24371 - 963 WP_224556825.1 tripartite tricarboxylate transporter substrate binding protein -
LOE21_RS19670 (LOE21_19670) 24390..25925 - 1536 WP_224556827.1 tripartite tricarboxylate transporter permease -
LOE21_RS19675 (LOE21_19675) 25933..26382 - 450 WP_224556829.1 tripartite tricarboxylate transporter TctB family protein -
LOE21_RS19680 (LOE21_19680) 26553..27512 + 960 WP_224556831.1 LysR family transcriptional regulator -
LOE21_RS19685 (LOE21_19685) 27663..28721 + 1059 WP_224556832.1 siderophore-interacting protein -
LOE21_RS19690 (LOE21_19690) 28762..29733 + 972 WP_224556833.1 ABC transporter substrate-binding protein -
LOE21_RS19695 (LOE21_19695) 29730..30731 + 1002 WP_229939097.1 putative siderophore transport system permease protein YfiZ VF
LOE21_RS19700 (LOE21_19700) 30800..31774 + 975 WP_229939136.1 Iron-uptake system permease protein FeuC VF
LOE21_RS19705 (LOE21_19705) 31771..32601 + 831 WP_224556836.1 putative siderophore transport system ATP-binding protein YusV VF
LOE21_RS19710 (LOE21_19710) 32769..34769 + 2001 WP_224556837.1 TonB-dependent siderophore receptor -
LOE21_RS19715 (LOE21_19715) 35410..37656 - 2247 WP_224556838.1 xanthine dehydrogenase family protein molybdopterin-binding subunit -
LOE21_RS19720 (LOE21_19720) 37649..38704 - 1056 WP_224556839.1 xanthine dehydrogenase family protein subunit M -
LOE21_RS19725 (LOE21_19725) 38701..39198 - 498 WP_224556840.1 (2Fe-2S)-binding protein -
LOE21_RS19730 (LOE21_19730) 39337..39909 + 573 WP_229939138.1 TetR/AcrR family transcriptional regulator -
LOE21_RS19735 (LOE21_19735) 40326..40616 + 291 WP_224556843.1 hypothetical protein -
LOE21_RS19740 (LOE21_19740) 41034..42368 - 1335 WP_224556846.1 type II toxin-antitoxin system HipA family toxin -
LOE21_RS19745 (LOE21_19745) 42368..42619 - 252 WP_224556848.1 helix-turn-helix domain-containing protein -
LOE21_RS19750 (LOE21_19750) 43092..43565 + 474 WP_224556849.1 MarR family winged helix-turn-helix transcriptional regulator -
LOE21_RS19755 (LOE21_19755) 43751..44509 + 759 WP_224556852.1 enoyl-CoA hydratase -
LOE21_RS19760 (LOE21_19760) 44597..45148 + 552 WP_224556854.1 Protein YrdA VF
LOE21_RS19765 (LOE21_19765) 45298..47520 - 2223 WP_224556857.1 PAS-domain containing protein -
LOE21_RS19770 (LOE21_19770) 47517..48563 - 1047 WP_229939099.1 FIST N-terminal domain-containing protein -
LOE21_RS19775 (LOE21_19775) 48750..49451 - 702 WP_224556861.1 response regulator transcription factor -
LOE21_RS19780 (LOE21_19780) 49562..51337 - 1776 WP_224556863.1 PQQ-dependent methanol/ethanol family dehydrogenase -
LOE21_RS19785 (LOE21_19785) 51525..52502 + 978 WP_224556865.1 ABC transporter substrate-binding protein -
LOE21_RS19790 (LOE21_19790) 52508..53182 + 675 WP_224556995.1 Taurine import ATP-binding protein TauB VF
LOE21_RS19795 (LOE21_19795) 53122..53658 - 537 WP_224556869.1 hypothetical protein VF
LOE21_RS19800 (LOE21_19800) 53693..54484 - 792 WP_224556871.1 ABC transporter permease -
LOE21_RS19805 (LOE21_19805) 54481..55197 - 717 WP_224556875.1 putative ABC transporter ATP-binding protein YadG VF
LOE21_RS19810 (LOE21_19810) 55194..55643 - 450 WP_224556878.1 hypothetical protein -
LOE21_RS19815 (LOE21_19815) 55661..56620 - 960 WP_224556880.1 YVTN family beta-propeller repeat protein -
LOE21_RS19820 (LOE21_19820) 56617..57747 - 1131 WP_224556882.1 ABC transporter substrate-binding protein -
LOE21_RS19825 (LOE21_19825) 57937..58635 + 699 WP_224556885.1 cytochrome c-550 PedF -
LOE21_RS19830 (LOE21_19830) 58670..59542 + 873 WP_224556997.1 transporter substrate-binding domain-containing protein -
LOE21_RS19835 (LOE21_19835) 59692..60177 + 486 WP_224556887.1 (2Fe-2S)-binding protein -
LOE21_RS19840 (LOE21_19840) 60199..62571 + 2373 WP_224556889.1 xanthine dehydrogenase family protein molybdopterin-binding subunit -
LOE21_RS19845 (LOE21_19845) 62582..63364 + 783 WP_224556891.1 xanthine dehydrogenase family protein subunit M -
LOE21_RS19850 (LOE21_19850) 63429..64301 - 873 WP_224556893.1 FAD:protein FMN transferase -
LOE21_RS19855 (LOE21_19855) 64298..66379 - 2082 WP_224556895.1 4Fe-4S binding protein -
LOE21_RS19860 (LOE21_19860) 66503..67279 + 777 WP_224556896.1 ABC transporter permease -
LOE21_RS19865 (LOE21_19865) 67276..67962 - 687 WP_224556898.1 vWA domain-containing protein -
LOE21_RS19870 (LOE21_19870) 67978..69063 - 1086 WP_224556900.1 pyrroloquinoline quinone biosynthesis protein PqqE -
LOE21_RS19875 (LOE21_19875) 69047..69325 - 279 WP_224556902.1 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD -
LOE21_RS19880 (LOE21_19880) 69325..70068 - 744 WP_224556903.1 pyrroloquinoline-quinone synthase PqqC -
LOE21_RS19885 (LOE21_19885) 70065..70952 - 888 WP_224556905.1 pyrroloquinoline quinone biosynthesis protein PqqB -
LOE21_RS19890 (LOE21_19890) 70966..71073 - 108 WP_224556908.1 pyrroloquinoline quinone precursor peptide PqqA -
LOE21_RS19895 (LOE21_19895) 71244..71639 + 396 WP_224556911.1 cytochrome c family protein -
LOE21_RS19900 (LOE21_19900) 71653..72174 + 522 WP_224556913.1 carbon monoxide dehydrogenase subunit G -
LOE21_RS19905 (LOE21_19905) 72476..73363 - 888 WP_224556916.1 LysR family transcriptional regulator -
LOE21_RS19910 (LOE21_19910) 73464..74075 + 612 WP_224556921.1 glutathione transferase GstA -
LOE21_RS19915 (LOE21_19915) 74072..74452 + 381 WP_224556923.1 nuclear transport factor 2 family protein -
LOE21_RS19920 (LOE21_19920) 74456..74674 + 219 WP_224556926.1 4-oxalocrotonate tautomerase family protein -
LOE21_RS19925 (LOE21_19925) 75055..76536 - 1482 WP_224556929.1 sodium:solute symporter family protein -
LOE21_RS19930 (LOE21_19930) 76533..76718 - 186 WP_224556932.1 hypothetical protein -
LOE21_RS19935 (LOE21_19935) 76835..77458 - 624 WP_224556935.1 isochorismatase family protein -
LOE21_RS19940 (LOE21_19940) 77480..78511 - 1032 WP_224556938.1 leucyl aminopeptidase -
LOE21_RS19945 (LOE21_19945) 78539..79321 - 783 WP_224556941.1 alpha/beta hydrolase -
LOE21_RS19950 (LOE21_19950) 79333..80034 - 702 WP_224557001.1 maleate isomerase -
LOE21_RS19955 (LOE21_19955) 80195..80863 - 669 WP_224556944.1 HTH-type transcriptional repressor VF
LOE21_RS19960 (LOE21_19960) 80871..81335 - 465 WP_224556946.1 MarR family transcriptional regulator -
LOE21_RS19965 (LOE21_19965) 81631..82143 + 513 WP_224556948.1 (2Fe-2S)-binding protein -
LOE21_RS19970 (LOE21_19970) 82140..85553 + 3414 WP_224556949.1 molybdopterin-dependent oxidoreductase -
LOE21_RS19975 (LOE21_19975) 85747..86880 + 1134 WP_224557003.1 FAD-dependent monooxygenase -
LOE21_RS19980 (LOE21_19980) 86868..87004 - 137 Protein_84 IS481 family transposase -
LOE21_RS19985 (LOE21_19985) 87056..88723 - 1668 WP_224556950.1 sulfatase-like hydrolase/transferase -
LOE21_RS19990 (LOE21_19990) 88786..89142 - 357 WP_224556951.1 hypothetical protein -
LOE21_RS19995 (LOE21_19995) 89384..89875 - 492 WP_224557005.1 3-keto-5-aminohexanoate cleavage protein -
LOE21_RS20000 (LOE21_20000) 90041..90985 + 945 Protein_88 IS110 family transposase ISWpi13 Transposase
LOE21_RS20005 (LOE21_20005) 90986..91897 + 912 Protein_89 IS3 family transposase ISXau3 Transposase
LOE21_RS20010 (LOE21_20010) 92529..92780 + 252 WP_224556953.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin Detail
LOE21_RS20015 (LOE21_20015) 92777..93043 + 267 WP_224556955.1 Txe/YoeB family addiction module toxin Toxin Detail
LOE21_RS20020 93104..93922 - 819 WP_229940646.1 hypothetical protein -
LOE21_RS20025 (LOE21_20025) 94013..94716 + 704 Protein_93 IS6 family transposase ISRH1 Transposase
LOE21_RS20030 (LOE21_20030) 94934..95791 - 858 WP_229940775.1 zinc-binding dehydrogenase -
LOE21_RS20035 (LOE21_20035) 97645..98700 - 1056 WP_224556960.1 plasmid replication protein RepC -
LOE21_RS20040 (LOE21_20040) 98939..99910 - 972 WP_224556962.1 plasmid partitioning protein RepB -
LOE21_RS20045 (LOE21_20045) 99910..101109 - 1200 WP_037930394.1 Cell division protein PomZ VF
LOE21_RS20050 (LOE21_20050) 101592..101750 - 159 Protein_98 short-chain dehydrogenase -
LOE21_RS20055 (LOE21_20055) 101838..102935 - 1098 WP_229939103.1 glycoside hydrolase family 88 protein -
LOE21_RS20060 (LOE21_20060) 102967..104034 - 1068 WP_224556967.1 TRAP transporter substrate-binding protein -
LOE21_RS20065 (LOE21_20065) 104342..104842 + 501 WP_224556969.1 TRAP transporter small permease -
LOE21_RS20070 (LOE21_20070) 104865..106172 + 1308 WP_229939144.1 TRAP transporter large permease -
LOE21_RS20075 (LOE21_20075) 106186..106926 + 741 WP_224556975.1 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase VF
LOE21_RS20080 (LOE21_20080) 106931..107947 - 1017 WP_224556977.1 LacI family DNA-binding transcriptional regulator -
LOE21_RS20085 (LOE21_20085) 108190..109026 + 837 WP_224556979.1 5-dehydro-4-deoxy-D-glucuronate isomerase -
LOE21_RS20090 (LOE21_20090) 109030..111489 + 2460 WP_224556981.1 hypothetical protein -
LOE21_RS20095 (LOE21_20095) 111967..112557 + 591 WP_229939111.1 NAD(P)H-dependent oxidoreductase -
LOE21_RS20100 (LOE21_20100) 113274..114158 + 885 WP_224556983.1 DUF1403 family protein -
LOE21_RS20105 (LOE21_20105) 114161..114775 + 615 WP_224556984.1 SMC-Scp complex subunit ScpB -
LOE21_RS20110 (LOE21_20110) 114876..115091 + 216 WP_224556986.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
LOE21_RS20115 (LOE21_20115) 115118..115621 + 504 WP_224556988.1 type II toxin-antitoxin system VapC family toxin -
LOE21_RS20120 (LOE21_20120) 115515..116227 + 713 Protein_112 IS6 family transposase -
LOE21_RS20125 (LOE21_20125) 116513..116686 - 174 WP_229939113.1 DDE-type integrase/transposase/recombinase -
LOE21_RS20130 (LOE21_20130) 118461..118850 - 390 WP_224556990.1 helix-turn-helix domain-containing protein -
LOE21_RS20135 (LOE21_20135) 119271..119375 + 105 WP_229939115.1 hypothetical protein -
LOE21_RS20140 (LOE21_20140) 119372..119638 + 267 WP_229939116.1 hypothetical protein -
LOE21_RS20145 (LOE21_20145) 119902..120786 + 885 WP_224556992.1 DUF1403 family protein -
LOE21_RS20150 (LOE21_20150) 120789..121382 + 594 WP_224556993.1 SMC-Scp complex subunit ScpB -
LOE21_RS20155 (LOE21_20155) 121668..121946 + 279 WP_229939064.1 IS66 family transposase ISSme3 Transposase
LOE21_RS20160 (LOE21_20160) 121943..122289 + 347 Protein_120 IS66 family transposase ISBcen14 Transposase
LOE21_RS20165 (LOE21_20165) 122368..123893 + 1526 Protein_121 IS66 family transposase ISAzs18 Transposase
LOE21_RS20170 (LOE21_20170) 123833..125079 - 1247 Protein_122 IS3 family transposase ISGxy1 Transposase
LOE21_RS20175 (LOE21_20175) 125162..125320 - 159 WP_224557998.1 IS110 family transposase ISMdi12 Transposase
LOE21_RS20180 125475..125744 + 270 WP_229940776.1 hypothetical protein -
LOE21_RS20185 (LOE21_20180) 126009..126967 - 959 Protein_125 IS481 family transposase -
LOE21_RS20190 (LOE21_20185) 126950..127777 + 828 WP_224557999.1 AAA family ATPase -
LOE21_RS20195 (LOE21_20190) 127722..128936 + 1215 WP_224558000.1 IS256 family transposase ISPa1328 Transposase
LOE21_RS20200 (LOE21_20195) 129190..130728 + 1539 WP_229939051.1 IS21 family transposase ISFK1 Transposase
LOE21_RS20205 (LOE21_20200) 130743..131507 + 765 WP_224558013.1 IS21 family transposase ISFK1 Transposase
LOE21_RS20210 (LOE21_20205) 131595..131756 - 162 WP_224557958.1 IS256 family transposase ISPa1328 Transposase
LOE21_RS20215 (LOE21_20210) 132321..135539 + 3219 WP_229940777.1 type II CRISPR RNA-guided endonuclease Cas9 -
LOE21_RS20220 (LOE21_20215) 136259..136660 + 402 WP_224557962.1 IS66 family transposase ISRel24 Transposase
LOE21_RS20225 (LOE21_20220) 136660..137010 + 351 WP_224557963.1 IS66 family transposase ISRel24 Transposase
LOE21_RS20230 (LOE21_20225) 137071..138702 + 1632 WP_224557964.1 IS66 family transposase ISRel24 Transposase
LOE21_RS20235 (LOE21_20230) 138705..138926 + 222 WP_224557965.1 hypothetical protein -
LOE21_RS20240 (LOE21_20235) 140221..140499 + 279 WP_229939064.1 IS66 family transposase ISSme3 Transposase
LOE21_RS20245 (LOE21_20240) 140496..140842 + 347 Protein_137 IS66 family transposase ISBcen14 Transposase
LOE21_RS20250 (LOE21_20245) 140921..142447 + 1527 WP_224558022.1 IS66 family transposase ISAzs18 Transposase
LOE21_RS20255 (LOE21_20250) 142662..142769 + 108 Protein_139 transposase -
LOE21_RS20260 (LOE21_20255) 144407..144961 + 555 WP_224558005.1 hypothetical protein -
LOE21_RS20265 (LOE21_20260) 145517..145705 + 189 WP_224558006.1 Flp family type IVb pilin -
LOE21_RS20270 (LOE21_20265) 145751..146494 + 744 WP_229940778.1 RcpC/CpaB family pilus assembly protein -
LOE21_RS20275 (LOE21_20270) 146694..147968 + 1275 WP_229940779.1 putative type IV piliation system protein VF
LOE21_RS20280 (LOE21_20275) 148051..148590 + 540 WP_224557980.1 CpaD family pilus assembly protein -
LOE21_RS20285 (LOE21_20280) 148612..149853 + 1242 WP_224557981.1 hypothetical protein -
LOE21_RS23165 150321..150677 + 357 Protein_146 ATPase, T2SS/T4P/T4SS family -
LOE21_RS23170 150799..151389 + 591 WP_229993682.1 Putative conjugal transfer protein VF
LOE21_RS20295 (LOE21_20290) 151386..152354 + 969 WP_224557982.1 hypothetical protein VF
LOE21_RS20300 (LOE21_20295) 152356..153306 + 951 WP_229939089.1 type II secretion system F family protein -
LOE21_RS20305 (LOE21_20300) 153303..153725 + 423 WP_224557940.1 pilus assembly protein -
LOE21_RS20310 (LOE21_20305) 153715..155490 + 1776 WP_224557939.1 pilus assembly protein TadG-related protein -
LOE21_RS20315 (LOE21_20310) 155537..156343 + 807 WP_051539349.1 Beta-barrel assembly-enhancing protease VF
LOE21_RS20320 (LOE21_20315) 156795..157271 + 477 WP_224557938.1 MarR family transcriptional regulator -
LOE21_RS20325 (LOE21_20320) 157293..158321 - 1029 WP_224557937.1 IS30 family transposase ISRssp4 Transposase
LOE21_RS20330 (LOE21_20325) 158604..159338 - 735 WP_224557936.1 hypothetical protein -
LOE21_RS20335 (LOE21_20330) 159436..159717 - 282 WP_224557935.1 hypothetical protein -
LOE21_RS20340 (LOE21_20335) 159857..161548 + 1692 WP_224557934.1 hypothetical protein -
LOE21_RS20345 (LOE21_20340) 161561..162565 + 1005 WP_224557933.1 alpha/beta hydrolase family protein -
LOE21_RS20350 (LOE21_20345) 162639..162842 - 204 WP_229939166.1 hypothetical protein -
LOE21_RS20355 (LOE21_20350) 163102..163470 + 369 WP_008327368.1 hypothetical protein -
LOE21_RS20360 (LOE21_20355) 163729..164631 - 903 Protein_161 methyltransferase -
LOE21_RS20365 (LOE21_20360) 164923..166032 - 1110 WP_224558030.1 IS110 family transposase ISEc45 Transposase
LOE21_RS20370 (LOE21_20365) 166134..166457 - 324 Protein_163 methylase -
LOE21_RS20375 (LOE21_20370) 166594..166989 - 396 WP_224557987.1 type II toxin-antitoxin system death-on-curing family toxin -
LOE21_RS20380 (LOE21_20375) 166986..167210 - 225 WP_108693368.1 transcriptional regulator/antitoxin MazE -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance