MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 157664 bp
Accession: NZ_CP086884 Location: 1..157664 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-89 Replicon: plasmid P7
Accession: NZ_CP086884 Location: 1..157664 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-89 Replicon: plasmid P7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE22_RS22945 (LOE22_22935) | 866..1750 | + | 885 | WP_229939227.1 | DUF1403 family protein | - |
| LOE22_RS22950 (LOE22_22940) | 1754..2350 | + | 597 | WP_109535033.1 | SMC-Scp complex subunit ScpB | - |
| LOE22_RS22955 (LOE22_22945) | 3374..4240 | - | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE22_RS22960 (LOE22_22950) | 4257..5891 | - | 1635 | WP_229939245.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE22_RS22965 (LOE22_22955) | 6192..7949 | - | 1758 | WP_224557756.1 | alpha/beta hydrolase | - |
| LOE22_RS22970 (LOE22_22960) | 8263..10194 | + | 1932 | WP_229941949.1 | VWA domain-containing protein | - |
| LOE22_RS22975 (LOE22_22965) | 10212..11075 | + | 864 | WP_224557754.1 | hypothetical protein | - |
| LOE22_RS22980 (LOE22_22970) | 11088..11609 | + | 522 | WP_224557753.1 | hypothetical protein | - |
| LOE22_RS22985 (LOE22_22975) | 12211..13170 | + | 960 | WP_224557752.1 | hypothetical protein | - |
| LOE22_RS22990 (LOE22_22980) | 13344..14663 | - | 1320 | WP_224557751.1 | MFS transporter | - |
| LOE22_RS22995 (LOE22_22985) | 14672..14932 | - | 261 | WP_007120627.1 | metal-sensing transcriptional repressor | - |
| LOE22_RS23000 (LOE22_22990) | 15434..16162 | + | 729 | WP_224557750.1 | HupE/UreJ family protein | - |
| LOE22_RS23005 (LOE22_22995) | 16180..16803 | + | 624 | WP_037929504.1 | hypothetical protein | - |
| LOE22_RS23010 (LOE22_23000) | 17015..17368 | + | 354 | WP_224557748.1 | hypothetical protein | - |
| LOE22_RS23015 (LOE22_23005) | 17459..18898 | + | 1440 | WP_082899302.1 | multicopper oxidase family protein | - |
| LOE22_RS23020 (LOE22_23010) | 18939..19394 | + | 456 | WP_037929510.1 | DUF411 domain-containing protein | - |
| LOE22_RS24145 | 19461..19595 | + | 135 | WP_263481059.1 | hypothetical protein | - |
| LOE22_RS23025 (LOE22_23015) | 19745..20170 | + | 426 | WP_224557746.1 | cytochrome c | - |
| LOE22_RS23030 (LOE22_23020) | 20167..20763 | + | 597 | WP_037929514.1 | DsbE family thiol:disulfide interchange protein | - |
| LOE22_RS23035 (LOE22_23025) | 20760..21272 | + | 513 | WP_037929516.1 | TlpA disulfide reductase family protein | - |
| LOE22_RS23040 (LOE22_23030) | 21355..21645 | + | 291 | WP_037929519.1 | hypothetical protein | - |
| LOE22_RS23045 (LOE22_23035) | 21645..22349 | + | 705 | WP_037929522.1 | SCO family protein | - |
| LOE22_RS23050 (LOE22_23040) | 22346..22837 | + | 492 | WP_081855445.1 | hypothetical protein | - |
| LOE22_RS23055 (LOE22_23045) | 22834..23574 | + | 741 | WP_037929528.1 | cytochrome c biogenesis protein CcdA | - |
| LOE22_RS23060 (LOE22_23050) | 23571..24680 | - | 1110 | WP_224557743.1 | permease | - |
| LOE22_RS23065 (LOE22_23055) | 24767..25492 | - | 726 | WP_037929534.1 | glutaredoxin domain-containing protein | - |
| LOE22_RS23070 (LOE22_23060) | 25554..26423 | - | 870 | WP_037929537.1 | DUF305 domain-containing protein | - |
| LOE22_RS23075 (LOE22_23065) | 26531..26950 | - | 420 | WP_037929540.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE22_RS23080 (LOE22_23070) | 26970..29477 | - | 2508 | WP_067293079.1 | heavy metal translocating P-type ATPase | - |
| LOE22_RS23085 (LOE22_23075) | 29616..29825 | + | 210 | WP_037929722.1 | heavy-metal-associated domain-containing protein | - |
| LOE22_RS23090 (LOE22_23080) | 29998..30414 | + | 417 | WP_037929545.1 | hypothetical protein | - |
| LOE22_RS23095 (LOE22_23085) | 30488..30709 | + | 222 | WP_223865963.1 | hypothetical protein | - |
| LOE22_RS23100 (LOE22_23090) | 30709..32169 | + | 1461 | WP_067293082.1 | TolC family protein | - |
| LOE22_RS23105 (LOE22_23095) | 32181..33539 | + | 1359 | WP_224557742.1 | copper oxidase | - |
| LOE22_RS23110 (LOE22_23100) | 33586..34302 | + | 717 | WP_037929554.1 | copper-binding protein | - |
| LOE22_RS23115 (LOE22_23105) | 34412..34945 | + | 534 | WP_009820144.1 | plastocyanin/azurin family copper-binding protein | - |
| LOE22_RS23120 (LOE22_23110) | 34954..36258 | + | 1305 | WP_009820143.1 | ABC transporter transmembrane domain-containing protein | - |
| LOE22_RS23125 (LOE22_23115) | 36255..36713 | + | 459 | WP_037929563.1 | cytochrome c | - |
| LOE22_RS23130 (LOE22_23120) | 36810..38051 | + | 1242 | WP_224557739.1 | sialidase family protein | - |
| LOE22_RS23135 (LOE22_23125) | 38095..41250 | - | 3156 | WP_224557738.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| LOE22_RS23140 (LOE22_23130) | 41247..42683 | - | 1437 | WP_067293091.1 | Cation efflux system protein CusB | VF |
| LOE22_RS23145 (LOE22_23135) | 42680..43078 | - | 399 | WP_067293094.1 | FixH family protein | - |
| LOE22_RS23150 (LOE22_23140) | 43605..45932 | - | 2328 | WP_111550081.1 | Copper-transporting P-type ATPase | VF |
| LOE22_RS23155 (LOE22_23145) | 46149..48500 | + | 2352 | WP_190325599.1 | cation-translocating P-type ATPase | - |
| LOE22_RS23160 (LOE22_23150) | 48562..49062 | + | 501 | WP_067293139.1 | L,D-transpeptidase family protein | - |
| LOE22_RS23165 (LOE22_23155) | 49088..49252 | - | 165 | WP_170134538.1 | hypothetical protein | - |
| LOE22_RS23170 (LOE22_23160) | 49249..50784 | - | 1536 | WP_224557736.1 | apolipoprotein N-acyltransferase | - |
| LOE22_RS23175 (LOE22_23165) | 50791..51267 | - | 477 | WP_067293102.1 | signal peptidase II | - |
| LOE22_RS23180 (LOE22_23170) | 51271..52053 | - | 783 | WP_090270173.1 | ZIP family metal transporter | - |
| LOE22_RS23185 (LOE22_23175) | 52064..52516 | - | 453 | WP_067293107.1 | DUF411 domain-containing protein | - |
| LOE22_RS23190 (LOE22_23180) | 52537..53886 | - | 1350 | WP_224557735.1 | M23 family metallopeptidase | - |
| LOE22_RS23195 (LOE22_23185) | 53883..54503 | - | 621 | WP_224557759.1 | SCO family protein | - |
| LOE22_RS23200 (LOE22_23190) | 54515..54946 | - | 432 | WP_067293146.1 | copper chaperone PCu(A)C | - |
| LOE22_RS23205 (LOE22_23195) | 55017..55679 | - | 663 | WP_067293112.1 | thioredoxin domain-containing protein | - |
| LOE22_RS23210 (LOE22_23200) | 55676..56119 | - | 444 | WP_007120864.1 | disulfide bond formation protein B | - |
| LOE22_RS23215 (LOE22_23205) | 56116..56655 | - | 540 | WP_223865966.1 | SCO family protein | - |
| LOE22_RS23220 (LOE22_23210) | 56903..57331 | + | 429 | WP_224557734.1 | IS607 family transposase ISChh1 | Transposase |
| LOE22_RS23225 (LOE22_23215) | 57328..57654 | + | 327 | WP_067293118.1 | YnfA family protein | - |
| LOE22_RS23230 (LOE22_23220) | 57768..58385 | + | 618 | WP_024099354.1 | cation transporter | - |
| LOE22_RS23235 (LOE22_23225) | 58472..59242 | + | 771 | WP_067293121.1 | transglutaminase family protein | - |
| LOE22_RS23240 (LOE22_23230) | 59232..60140 | + | 909 | Protein_61 | cation diffusion facilitator family transporter | - |
| LOE22_RS23245 (LOE22_23235) | 60133..60690 | + | 558 | WP_040652314.1 | methyltransferase | - |
| LOE22_RS23250 (LOE22_23240) | 60799..61389 | + | 591 | WP_224557758.1 | L,D-transpeptidase | - |
| LOE22_RS23255 (LOE22_23245) | 61407..61676 | + | 270 | WP_111550076.1 | hypothetical protein | - |
| LOE22_RS23260 (LOE22_23250) | 61760..62425 | - | 666 | WP_067293124.1 | L,D-transpeptidase | - |
| LOE22_RS23265 (LOE22_23255) | 62680..63837 | - | 1158 | WP_229939233.1 | replication initiation protein RepC | - |
| LOE22_RS23270 (LOE22_23260) | 64058..64711 | - | 654 | WP_121066465.1 | hypothetical protein | - |
| LOE22_RS23275 (LOE22_23265) | 64797..65066 | - | 270 | WP_111550073.1 | hypothetical protein | - |
| LOE22_RS23280 (LOE22_23275) | 65655..66236 | + | 582 | WP_224557975.1 | lytic transglycosylase domain-containing protein | - |
| LOE22_RS23285 (LOE22_23280) | 66233..66517 | + | 285 | WP_224557971.1 | hypothetical protein | VF |
| LOE22_RS23290 (LOE22_23285) | 66541..66816 | + | 276 | WP_009819926.1 | VirB3 family type IV secretion system protein | - |
| LOE22_RS23295 (LOE22_23290) | 66917..69175 | + | 2259 | WP_229940657.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LOE22_RS23300 (LOE22_23295) | 69341..70429 | + | 1089 | WP_224557968.1 | lytic transglycosylase domain-containing protein | - |
| LOE22_RS23305 (LOE22_23300) | 70419..71228 | + | 810 | WP_224557967.1 | type IV secretion system protein | - |
| LOE22_RS23310 (LOE22_23305) | 71232..71720 | + | 489 | WP_229939238.1 | hypothetical protein | - |
| LOE22_RS23315 (LOE22_23310) | 71720..72721 | + | 1002 | WP_224557930.1 | type IV secretion system protein | - |
| LOE22_RS23320 (LOE22_23315) | 72724..73368 | + | 645 | WP_224557929.1 | Type IV secretion system protein PtlE | VF |
| LOE22_RS23325 (LOE22_23320) | 73372..74103 | + | 732 | WP_224557928.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LOE22_RS23330 (LOE22_23325) | 74106..75563 | + | 1458 | WP_224557927.1 | Type IV secretion system protein PtlG | VF |
| LOE22_RS23335 (LOE22_23330) | 75674..76663 | + | 990 | WP_224557926.1 | Type IV secretion system protein VirB11 | VF |
| LOE22_RS23340 (LOE22_23335) | 76811..77059 | + | 249 | WP_229939240.1 | plasmid stabilization protein | Antitoxin Detail |
| LOE22_RS23345 (LOE22_23340) | 77063..77485 | + | 423 | WP_224557924.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LOE22_RS23350 (LOE22_23345) | 77482..80232 | + | 2751 | WP_224557923.1 | lactate dehydrogenase | - |
| LOE22_RS23355 (LOE22_23350) | 80229..81287 | + | 1059 | WP_224557922.1 | HEPN domain-containing protein | - |
| LOE22_RS23360 (LOE22_23355) | 81467..82921 | + | 1455 | WP_229941945.1 | ATP-binding protein | - |
| LOE22_RS23365 (LOE22_23360) | 83097..83423 | + | 327 | Protein_86 | DEAD/DEAH box helicase family protein | - |
| LOE22_RS23370 (LOE22_23365) | 83484..84146 | + | 663 | WP_224558010.1 | plasmid pRiA4b ORF-3 family protein | - |
| LOE22_RS23375 (LOE22_23370) | 84265..84846 | + | 582 | WP_224558009.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| LOE22_RS23380 (LOE22_23375) | 84873..86258 | + | 1386 | WP_224558008.1 | ISKra4 family transposase ISUnCu7 | Transposase |
| LOE22_RS23385 (LOE22_23380) | 86313..86510 | + | 198 | WP_224557951.1 | hypothetical protein | - |
| LOE22_RS23395 (LOE22_23390) | 88076..89086 | - | 1011 | WP_224557953.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LOE22_RS23400 (LOE22_23395) | 89185..92652 | - | 3468 | WP_224557954.1 | indolepyruvate ferredoxin oxidoreductase family protein | - |
| LOE22_RS23405 (LOE22_23400) | 92842..93246 | + | 405 | WP_229939178.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| LOE22_RS23410 (LOE22_23405) | 93265..94050 | - | 786 | WP_229939180.1 | zinc-binding dehydrogenase | - |
| LOE22_RS23420 (LOE22_23415) | 96001..97065 | + | 1065 | WP_224557894.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| LOE22_RS23425 (LOE22_23420) | 97062..99290 | + | 2229 | WP_224557893.1 | glycosyltransferase | - |
| LOE22_RS23430 (LOE22_23425) | 99574..100602 | + | 1029 | WP_224557892.1 | IS110 family transposase ISPko7 | Transposase |
| LOE22_RS23435 (LOE22_23430) | 100922..101846 | + | 925 | Protein_100 | IS5 family transposase ISUnCu15 | Transposase |
| LOE22_RS23440 (LOE22_23435) | 101849..102061 | - | 213 | WP_224557891.1 | hypothetical protein | - |
| LOE22_RS23445 (LOE22_23440) | 102058..102594 | - | 537 | WP_229940780.1 | hypothetical protein | - |
| LOE22_RS23450 (LOE22_23445) | 102591..104891 | - | 2301 | WP_224557889.1 | VWA domain-containing protein | - |
| LOE22_RS23455 (LOE22_23450) | 104888..105859 | - | 972 | WP_224557888.1 | hypothetical protein | - |
| LOE22_RS23460 (LOE22_23455) | 105883..106407 | - | 525 | WP_224557886.1 | hypothetical protein | - |
| LOE22_RS23465 (LOE22_23460) | 106404..106931 | - | 528 | WP_224557885.1 | hypothetical protein | - |
| LOE22_RS23470 (LOE22_23465) | 106928..107407 | - | 480 | WP_224557884.1 | hypothetical protein | - |
| LOE22_RS23475 (LOE22_23470) | 107416..107988 | - | 573 | WP_224557883.1 | hypothetical protein | - |
| LOE22_RS23480 (LOE22_23475) | 107990..108541 | - | 552 | WP_224557882.1 | hypothetical protein | - |
| LOE22_RS23485 (LOE22_23480) | 108678..109160 | + | 483 | WP_224557881.1 | molybdopterin-dependent oxidoreductase | - |
| LOE22_RS23490 (LOE22_23485) | 109157..110494 | + | 1338 | WP_224557880.1 | HAMP domain-containing sensor histidine kinase | - |
| LOE22_RS23495 (LOE22_23490) | 110491..111456 | + | 966 | WP_224557879.1 | Transcriptional regulatory protein AfsQ1 | VF |
| LOE22_RS23500 (LOE22_23495) | 111531..111956 | - | 426 | WP_224557878.1 | hypothetical protein | - |
| LOE22_RS23505 (LOE22_23500) | 112082..113101 | + | 1020 | WP_224557877.1 | IS110 family transposase ISAzs4 | Transposase |
| LOE22_RS23510 (LOE22_23505) | 113456..114316 | - | 861 | WP_224557876.1 | LysR family transcriptional regulator | - |
| LOE22_RS23515 (LOE22_23510) | 114473..115192 | + | 720 | WP_224557875.1 | hypothetical protein | - |
| LOE22_RS23520 (LOE22_23515) | 115393..115812 | - | 420 | WP_229940658.1 | hypothetical protein | - |
| LOE22_RS23525 (LOE22_23520) | 115873..116503 | + | 631 | Protein_118 | transposase | - |
| LOE22_RS23530 (LOE22_23525) | 116569..117326 | + | 758 | WP_156127956.1 | IS5 family transposase IS1248A | Transposase |
| LOE22_RS23535 (LOE22_23530) | 117393..118241 | - | 849 | WP_229940659.1 | CoA ester lyase | - |
| LOE22_RS23540 (LOE22_23535) | 118320..119549 | - | 1230 | WP_043755120.1 | CoA transferase | - |
| LOE22_RS23545 (LOE22_23540) | 119546..120031 | - | 486 | WP_043755138.1 | MaoC family dehydratase | - |
| LOE22_RS23550 (LOE22_23545) | 120042..121277 | - | 1236 | WP_043755124.1 | acyl-CoA dehydrogenase family protein | - |
| LOE22_RS23555 (LOE22_23550) | 121274..121768 | - | 495 | WP_043755128.1 | MaoC family dehydratase | - |
| LOE22_RS23560 (LOE22_23555) | 121765..123108 | - | 1344 | WP_224557915.1 | MmgE/PrpD family protein | - |
| LOE22_RS23565 (LOE22_23560) | 123098..124378 | - | 1281 | WP_052418558.1 | TRAP transporter large permease | - |
| LOE22_RS23570 (LOE22_23565) | 124378..124923 | - | 546 | WP_081979733.1 | TRAP transporter small permease | - |
| LOE22_RS23575 (LOE22_23570) | 124989..125987 | - | 999 | WP_052418559.1 | TRAP transporter substrate-binding protein DctP | - |
| LOE22_RS23580 (LOE22_23575) | 126136..127056 | - | 921 | WP_043755133.1 | HTH-type transcriptional regulator GltC | VF |
| LOE22_RS23585 (LOE22_23580) | 127087..127806 | - | 720 | WP_229939243.1 | LysR substrate-binding domain-containing protein | - |
| LOE22_RS23590 (LOE22_23585) | 127747..128193 | + | 447 | Protein_131 | IS6 family transposase | - |
| LOE22_RS23595 (LOE22_23590) | 128170..130839 | - | 2670 | WP_229939218.1 | strawberry notch family protein | - |
| LOE22_RS23600 (LOE22_23595) | 131065..132174 | - | 1110 | WP_224558030.1 | IS110 family transposase ISEc45 | Transposase |
| LOE22_RS23605 (LOE22_23600) | 132276..132656 | - | 381 | Protein_134 | hypothetical protein | - |
| LOE22_RS23610 (LOE22_23605) | 132833..133126 | + | 294 | WP_067297285.1 | hypothetical protein | - |
| LOE22_RS23615 (LOE22_23610) | 133649..134350 | - | 702 | WP_067297288.1 | RES family NAD+ phosphorylase | - |
| LOE22_RS23620 (LOE22_23615) | 134347..134748 | - | 402 | WP_067297291.1 | MbcA/ParS/Xre antitoxin family protein | - |
| LOE22_RS23625 (LOE22_23620) | 134807..135451 | - | 645 | WP_121066445.1 | antitoxin of toxin-antitoxin stability system | - |
| LOE22_RS23630 (LOE22_23625) | 135444..135863 | - | 420 | WP_067297244.1 | hypothetical protein | - |
| LOE22_RS23635 (LOE22_23630) | 135939..136136 | - | 198 | WP_047998245.1 | hypothetical protein | - |
| LOE22_RS23640 (LOE22_23635) | 136138..136515 | - | 378 | WP_114276348.1 | hypothetical protein | - |
| LOE22_RS23645 (LOE22_23640) | 136526..137017 | - | 492 | WP_067297141.1 | hypothetical protein | - |
| LOE22_RS23650 (LOE22_23645) | 137121..137639 | - | 519 | WP_114276373.1 | DNA repair protein RadC | - |
| LOE22_RS23655 (LOE22_23650) | 137749..138189 | - | 441 | WP_114276349.1 | DNA repair protein RadC | - |
| LOE22_RS23660 (LOE22_23655) | 138317..139516 | - | 1200 | WP_121066443.1 | DUF932 domain-containing protein | - |
| LOE22_RS23665 (LOE22_23660) | 139654..140559 | - | 906 | WP_114276002.1 | hypothetical protein | - |
| LOE22_RS23670 (LOE22_23665) | 140599..141195 | + | 597 | WP_037954955.1 | hypothetical protein | - |
| LOE22_RS23675 (LOE22_23670) | 141250..141654 | - | 405 | WP_009827211.1 | single-stranded DNA-binding protein | - |
| LOE22_RS23680 (LOE22_23675) | 142074..142361 | + | 288 | WP_009827212.1 | H-NS histone family protein | - |
| LOE22_RS23685 (LOE22_23680) | 142371..143816 | - | 1446 | WP_114276004.1 | hypothetical protein | - |
| LOE22_RS23690 (LOE22_23685) | 144055..144219 | - | 165 | WP_007803240.1 | hypothetical protein | - |
| LOE22_RS23695 (LOE22_23690) | 144603..145076 | - | 474 | WP_114276003.1 | hypothetical protein | - |
| LOE22_RS23700 (LOE22_23695) | 145176..147353 | - | 2178 | WP_224556256.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE22_RS23705 (LOE22_23700) | 147644..148687 | - | 1044 | WP_114276417.1 | IS5 family transposase ISPmar3 | Transposase |
| LOE22_RS23710 (LOE22_23705) | 148753..149910 | - | 1158 | WP_121066480.1 | helix-turn-helix domain-containing protein | - |
| LOE22_RS23715 (LOE22_23710) | 150150..151109 | - | 960 | WP_121066477.1 | plasmid partitioning protein RepB | - |
| LOE22_RS23720 (LOE22_23715) | 151099..152235 | - | 1137 | WP_229940660.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE22_RS23725 (LOE22_23720) | 152743..153630 | - | 888 | WP_114273238.1 | Tn3 family transposase ISPsy42 | Transposase |
| LOE22_RS23730 (LOE22_23725) | 153835..157173 | + | 3339 | WP_224556255.1 | DEAD/DEAH box helicase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|