MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110569 bp
Accession: NZ_CP086880 Location: 1..110569 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-89 Replicon: plasmid P3
Accession: NZ_CP086880 Location: 1..110569 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-89 Replicon: plasmid P3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE22_RS20825 (LOE22_20815) | 74..340 | + | 267 | WP_229939268.1 | DUF3768 domain-containing protein | - |
| LOE22_RS20830 (LOE22_20820) | 555..1586 | + | 1032 | WP_229947183.1 | IS110 family transposase ISRhru3 | Transposase |
| LOE22_RS20835 (LOE22_20825) | 2054..4036 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE22_RS20840 (LOE22_20830) | 4109..4801 | + | 693 | WP_224557484.1 | regulator | - |
| LOE22_RS20845 (LOE22_20835) | 4801..5454 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE22_RS20850 (LOE22_20840) | 5578..5904 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE22_RS20855 (LOE22_20845) | 5901..6418 | + | 518 | Protein_6 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE22_RS20860 (LOE22_20850) | 6957..7238 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE22_RS20865 (LOE22_20855) | 7457..8586 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRosp1 | Transposase |
| LOE22_RS20870 (LOE22_20860) | 8613..9005 | + | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE22_RS20875 (LOE22_20865) | 9186..10007 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE22_RS20880 (LOE22_20870) | 10004..11044 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE22_RS20885 (LOE22_20875) | 11041..11976 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE22_RS20890 (LOE22_20880) | 11981..12769 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE22_RS20895 (LOE22_20885) | 12808..13809 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE22_RS20900 (LOE22_20890) | 13907..14761 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE22_RS20905 (LOE22_20895) | 14794..15648 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE22_RS20910 (LOE22_20900) | 15656..16462 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE22_RS20915 (LOE22_20905) | 16455..17255 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE22_RS20920 (LOE22_20910) | 17252..18310 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE22_RS20925 (LOE22_20915) | 18303..19175 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE22_RS20930 (LOE22_20920) | 19202..20368 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE22_RS20935 (LOE22_20925) | 20423..21109 | - | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE22_RS20940 (LOE22_20930) | 21099..21425 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE22_RS20945 (LOE22_20935) | 21422..22189 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE22_RS20950 (LOE22_20940) | 22255..22770 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE22_RS20955 (LOE22_20945) | 22767..24053 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE22_RS20960 (LOE22_20950) | 24082..25284 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE22_RS20965 (LOE22_20955) | 25447..25947 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE22_RS20970 (LOE22_20960) | 26267..27433 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE22_RS20975 (LOE22_20965) | 27430..29433 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE22_RS20980 (LOE22_20970) | 29430..30224 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE22_RS20985 (LOE22_20975) | 30234..31832 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE22_RS20990 (LOE22_20980) | 31912..32526 | - | 615 | Protein_33 | IS21 family transposase ISPve1 | Transposase |
| LOE22_RS20995 (LOE22_20985) | 32523..33968 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE22_RS21000 (LOE22_20990) | 34129..34407 | - | 279 | Protein_35 | transposase | - |
| LOE22_RS21005 (LOE22_20995) | 34696..35463 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE22_RS21010 (LOE22_21000) | 35499..36215 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE22_RS21015 (LOE22_21005) | 37194..38123 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE22_RS21020 (LOE22_21010) | 38662..38868 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE22_RS21025 (LOE22_21015) | 39421..39978 | + | 558 | WP_224557513.1 | transposase | - |
| LOE22_RS21030 (LOE22_21020) | 39965..42298 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE22_RS21035 (LOE22_21025) | 42307..44307 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE22_RS21040 (LOE22_21030) | 44425..45207 | - | 783 | Protein_43 | LysR family transcriptional regulator | - |
| LOE22_RS21045 (LOE22_21035) | 45191..45841 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE22_RS21050 (LOE22_21040) | 45889..47247 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE22_RS21055 (LOE22_21045) | 47259..48722 | - | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE22_RS21060 (LOE22_21050) | 49017..49439 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE22_RS21065 (LOE22_21055) | 49638..49838 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE22_RS21070 (LOE22_21060) | 49979..52486 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE22_RS21075 (LOE22_21065) | 52506..52925 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE22_RS21080 (LOE22_21070) | 53049..53921 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE22_RS21085 (LOE22_21075) | 53944..54708 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE22_RS21090 (LOE22_21080) | 54809..55549 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE22_RS21095 (LOE22_21085) | 55546..56037 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE22_RS21100 (LOE22_21090) | 56034..56234 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE22_RS21105 (LOE22_21095) | 56376..57341 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE22_RS21110 (LOE22_21100) | 57331..58086 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE22_RS21115 (LOE22_21105) | 58183..58761 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE22_RS21120 (LOE22_21110) | 58865..59293 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE22_RS21125 (LOE22_21115) | 59501..60067 | + | 567 | WP_028095363.1 | SCO family protein | - |
| LOE22_RS21130 (LOE22_21120) | 60073..60495 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE22_RS21135 (LOE22_21125) | 60492..61151 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE22_RS21140 (LOE22_21130) | 61175..61642 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE22_RS21145 (LOE22_21135) | 61642..62268 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE22_RS21150 (LOE22_21140) | 62265..63638 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE22_RS21155 (LOE22_21145) | 63642..64097 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE22_RS21160 (LOE22_21150) | 64110..64892 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE22_RS21165 (LOE22_21155) | 64921..65379 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE22_RS21170 (LOE22_21160) | 65346..66959 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE22_RS21175 (LOE22_21165) | 66950..67117 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE22_RS21180 (LOE22_21170) | 67178..69079 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE22_RS21185 (LOE22_21175) | 69076..70077 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE22_RS21190 (LOE22_21180) | 70297..70809 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE22_RS21195 (LOE22_21185) | 70992..71258 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE22_RS21200 (LOE22_21190) | 71293..73647 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE22_RS21205 (LOE22_21195) | 73830..74114 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE22_RS21210 (LOE22_21200) | 74162..74824 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE22_RS21215 (LOE22_21205) | 75116..75568 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE22_RS21220 (LOE22_21210) | 75630..76124 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE22_RS21225 (LOE22_21215) | 76124..77053 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE22_RS21230 (LOE22_21220) | 77071..78516 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE22_RS21235 (LOE22_21225) | 78678..79127 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE22_RS21240 (LOE22_21230) | 79122..79574 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE22_RS21245 (LOE22_21235) | 79901..80899 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE22_RS21250 (LOE22_21240) | 80896..82077 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE22_RS21255 (LOE22_21245) | 82405..83403 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE22_RS21260 (LOE22_21250) | 83564..85198 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE22_RS21265 (LOE22_21255) | 85215..86081 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE22_RS21270 (LOE22_21260) | 87105..87716 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE22_RS21275 (LOE22_21265) | 87764..88648 | - | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE22_RS21280 (LOE22_21270) | 88775..89914 | + | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE22_RS21285 (LOE22_21275) | 90016..90507 | + | 492 | Protein_92 | recombinase family protein | - |
| LOE22_RS21290 (LOE22_21280) | 90586..90981 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE22_RS21295 (LOE22_21285) | 90971..91198 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE22_RS21300 (LOE22_21290) | 91407..92600 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE22_RS21305 (LOE22_21295) | 92584..93516 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE22_RS21310 (LOE22_21300) | 93730..94941 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE22_RS21315 (LOE22_21305) | 95110..96871 | + | 1762 | Protein_98 | ParB N-terminal domain-containing protein | - |
| LOE22_RS21320 (LOE22_21310) | 97028..98395 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE22_RS21325 (LOE22_21315) | 98392..99051 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE22_RS21330 (LOE22_21320) | 99197..99514 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE22_RS21335 (LOE22_21325) | 99471..100856 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE22_RS21340 (LOE22_21330) | 101037..101417 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE22_RS21345 (LOE22_21335) | 101453..101923 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE22_RS21350 (LOE22_21340) | 101935..104142 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE22_RS21355 (LOE22_21345) | 104123..105103 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE22_RS21360 (LOE22_21350) | 105109..107016 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE22_RS21365 (LOE22_21355) | 107013..107714 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE22_RS21370 (LOE22_21360) | 107850..108011 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE22_RS21375 (LOE22_21365) | 108040..108333 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE22_RS21380 (LOE22_21370) | 108686..109156 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE22_RS21385 (LOE22_21375) | 109197..110135 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE22_RS21390 (LOE22_21380) | 110159..110431 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|