MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 157666 bp
Accession: NZ_CP086876 Location: 1..157666 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-97 Replicon: plasmid P6
Accession: NZ_CP086876 Location: 1..157666 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-97 Replicon: plasmid P6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE23_RS22925 (LOE23_22895) | 498..974 | - | 477 | WP_067293102.1 | signal peptidase II | - |
| LOE23_RS22930 (LOE23_22900) | 978..1760 | - | 783 | WP_090270173.1 | ZIP family metal transporter | - |
| LOE23_RS22935 (LOE23_22905) | 1771..2223 | - | 453 | WP_067293107.1 | DUF411 domain-containing protein | - |
| LOE23_RS22940 (LOE23_22910) | 2244..3560 | - | 1317 | WP_229940656.1 | M23 family metallopeptidase | - |
| LOE23_RS22945 (LOE23_22915) | 3590..4210 | - | 621 | WP_224557759.1 | SCO family protein | - |
| LOE23_RS22950 (LOE23_22920) | 4222..4653 | - | 432 | WP_067293146.1 | copper chaperone PCu(A)C | - |
| LOE23_RS22955 (LOE23_22925) | 4724..5386 | - | 663 | WP_067293112.1 | thioredoxin domain-containing protein | - |
| LOE23_RS22960 (LOE23_22930) | 5383..5826 | - | 444 | WP_007120864.1 | disulfide bond formation protein B | - |
| LOE23_RS22965 (LOE23_22935) | 5823..6362 | - | 540 | WP_223865966.1 | SCO family protein | - |
| LOE23_RS22970 (LOE23_22940) | 6610..7038 | + | 429 | WP_224557734.1 | helix-turn-helix domain-containing protein | - |
| LOE23_RS22975 (LOE23_22945) | 7035..7361 | + | 327 | WP_067293118.1 | YnfA family protein | - |
| LOE23_RS22980 (LOE23_22950) | 7475..8092 | + | 618 | WP_024099354.1 | cation transporter | - |
| LOE23_RS22985 (LOE23_22955) | 8179..8949 | + | 771 | WP_067293121.1 | transglutaminase family protein | - |
| LOE23_RS22990 (LOE23_22960) | 8939..9847 | + | 909 | Protein_14 | cation diffusion facilitator family transporter | - |
| LOE23_RS22995 (LOE23_22965) | 9840..10397 | + | 558 | WP_040652314.1 | methyltransferase | - |
| LOE23_RS23000 (LOE23_22970) | 10506..11096 | + | 591 | WP_224557758.1 | L,D-transpeptidase | - |
| LOE23_RS23005 (LOE23_22975) | 11114..11383 | + | 270 | WP_111550076.1 | hypothetical protein | - |
| LOE23_RS23010 (LOE23_22980) | 11467..12132 | - | 666 | WP_067293124.1 | L,D-transpeptidase | - |
| LOE23_RS23015 (LOE23_22985) | 12387..13544 | - | 1158 | WP_229939233.1 | replication initiation protein RepC | - |
| LOE23_RS23020 (LOE23_22990) | 13765..14418 | - | 654 | WP_121066465.1 | hypothetical protein | - |
| LOE23_RS23025 (LOE23_22995) | 14504..14773 | - | 270 | WP_111550073.1 | hypothetical protein | - |
| LOE23_RS23030 (LOE23_23000) | 14971..15312 | + | 342 | WP_224557973.1 | hypothetical protein | - |
| LOE23_RS23035 (LOE23_23005) | 15362..15943 | + | 582 | WP_224557975.1 | lytic transglycosylase domain-containing protein | - |
| LOE23_RS23040 (LOE23_23010) | 15940..16224 | + | 285 | WP_224557971.1 | TrbC/VirB2 family protein | - |
| LOE23_RS23045 (LOE23_23015) | 16248..16523 | + | 276 | WP_009819926.1 | VirB3 family type IV secretion system protein | - |
| LOE23_RS23050 (LOE23_23020) | 16624..18882 | + | 2259 | WP_229940657.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LOE23_RS23055 (LOE23_23025) | 19048..20136 | + | 1089 | WP_224557968.1 | lytic transglycosylase domain-containing protein | - |
| LOE23_RS23060 (LOE23_23030) | 20126..20935 | + | 810 | WP_224557967.1 | type IV secretion system protein | - |
| LOE23_RS23065 (LOE23_23035) | 20939..21427 | + | 489 | WP_229939238.1 | hypothetical protein | - |
| LOE23_RS23070 (LOE23_23040) | 21427..22428 | + | 1002 | WP_224557930.1 | type IV secretion system protein | - |
| LOE23_RS23075 (LOE23_23045) | 22431..23075 | + | 645 | WP_224557929.1 | type IV secretion system protein | - |
| LOE23_RS23080 (LOE23_23050) | 23079..23810 | + | 732 | WP_224557928.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| LOE23_RS23085 (LOE23_23055) | 23813..25270 | + | 1458 | WP_224557927.1 | TrbI/VirB10 family protein | - |
| LOE23_RS23090 (LOE23_23060) | 25381..26370 | + | 990 | WP_224557926.1 | P-type DNA transfer ATPase VirB11 | - |
| LOE23_RS23095 (LOE23_23065) | 26518..26766 | + | 249 | WP_229939240.1 | plasmid stabilization protein | Antitoxin Detail |
| LOE23_RS23100 (LOE23_23070) | 26770..27192 | + | 423 | WP_224557924.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LOE23_RS23105 (LOE23_23075) | 27189..29939 | + | 2751 | WP_224557923.1 | lactate dehydrogenase | - |
| LOE23_RS23110 (LOE23_23080) | 29936..30994 | + | 1059 | WP_224557922.1 | HEPN domain-containing protein | - |
| LOE23_RS23115 (LOE23_23085) | 31174..32628 | + | 1455 | WP_229941945.1 | ATP-binding protein | - |
| LOE23_RS23120 (LOE23_23090) | 32804..33130 | + | 327 | Protein_40 | DEAD/DEAH box helicase family protein | - |
| LOE23_RS23125 (LOE23_23095) | 33191..33853 | + | 663 | WP_224558010.1 | plasmid pRiA4b ORF-3 family protein | - |
| LOE23_RS23130 (LOE23_23100) | 33972..34553 | + | 582 | WP_224558009.1 | recombinase family protein | - |
| LOE23_RS23135 (LOE23_23105) | 34580..35965 | + | 1386 | WP_224558008.1 | ISKra4 family transposase | - |
| LOE23_RS23140 (LOE23_23110) | 36020..36217 | + | 198 | WP_224557951.1 | hypothetical protein | - |
| LOE23_RS23150 (LOE23_23120) | 37783..38793 | - | 1011 | WP_224557953.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LOE23_RS23155 (LOE23_23125) | 38892..42359 | - | 3468 | WP_224557954.1 | indolepyruvate ferredoxin oxidoreductase family protein | - |
| LOE23_RS23160 (LOE23_23130) | 42549..42953 | + | 405 | WP_229939178.1 | Lrp/AsnC ligand binding domain-containing protein | - |
| LOE23_RS23165 (LOE23_23135) | 42972..43757 | - | 786 | WP_229939180.1 | zinc-binding dehydrogenase | - |
| LOE23_RS23175 (LOE23_23145) | 45708..46772 | + | 1065 | WP_224557894.1 | lysylphosphatidylglycerol synthase transmembrane domain-containing protein | - |
| LOE23_RS23180 (LOE23_23150) | 46769..48997 | + | 2229 | WP_224557893.1 | glycosyltransferase | - |
| LOE23_RS23185 (LOE23_23155) | 49281..50309 | + | 1029 | WP_224557892.1 | IS110 family transposase | - |
| LOE23_RS23190 (LOE23_23160) | 50629..51553 | + | 925 | Protein_54 | IS5-like element ISUnCu15 family transposase | - |
| LOE23_RS23195 (LOE23_23165) | 51556..51768 | - | 213 | WP_224557891.1 | hypothetical protein | - |
| LOE23_RS23200 (LOE23_23170) | 51765..52259 | - | 495 | WP_224557890.1 | hypothetical protein | - |
| LOE23_RS23205 (LOE23_23175) | 52298..54598 | - | 2301 | WP_224557889.1 | VWA domain-containing protein | - |
| LOE23_RS23210 (LOE23_23180) | 54595..55566 | - | 972 | WP_224557888.1 | hypothetical protein | - |
| LOE23_RS23215 (LOE23_23185) | 55590..56114 | - | 525 | WP_224557886.1 | hypothetical protein | - |
| LOE23_RS23220 (LOE23_23190) | 56111..56638 | - | 528 | WP_224557885.1 | hypothetical protein | - |
| LOE23_RS23225 (LOE23_23195) | 56635..57114 | - | 480 | WP_224557884.1 | hypothetical protein | - |
| LOE23_RS23230 (LOE23_23200) | 57123..57695 | - | 573 | WP_224557883.1 | hypothetical protein | - |
| LOE23_RS23235 (LOE23_23205) | 57697..58248 | - | 552 | WP_224557882.1 | hypothetical protein | - |
| LOE23_RS23240 (LOE23_23210) | 58385..58867 | + | 483 | WP_224557881.1 | molybdopterin-dependent oxidoreductase | - |
| LOE23_RS23245 (LOE23_23215) | 58864..60201 | + | 1338 | WP_224557880.1 | HAMP domain-containing sensor histidine kinase | - |
| LOE23_RS23250 (LOE23_23220) | 60198..61163 | + | 966 | WP_224557879.1 | response regulator | - |
| LOE23_RS23255 (LOE23_23225) | 61238..61663 | - | 426 | WP_224557878.1 | hypothetical protein | - |
| LOE23_RS23260 (LOE23_23230) | 61789..62808 | + | 1020 | WP_224557877.1 | IS110 family transposase | - |
| LOE23_RS23265 (LOE23_23235) | 63163..64023 | - | 861 | WP_224557876.1 | LysR family transcriptional regulator | - |
| LOE23_RS23270 (LOE23_23240) | 64180..64899 | + | 720 | WP_224557875.1 | hypothetical protein | - |
| LOE23_RS23275 (LOE23_23245) | 65100..65519 | - | 420 | WP_229940658.1 | hypothetical protein | - |
| LOE23_RS23280 (LOE23_23250) | 65580..66211 | + | 632 | Protein_72 | transposase | - |
| LOE23_RS23285 (LOE23_23255) | 66277..67034 | + | 758 | WP_156127956.1 | IS5 family transposase | - |
| LOE23_RS23290 (LOE23_23260) | 67101..68018 | - | 918 | WP_043755117.1 | CoA ester lyase | - |
| LOE23_RS23295 (LOE23_23265) | 68028..69257 | - | 1230 | WP_043755120.1 | CoA transferase | - |
| LOE23_RS23300 (LOE23_23270) | 69254..69739 | - | 486 | WP_043755138.1 | MaoC family dehydratase | - |
| LOE23_RS23305 (LOE23_23275) | 69750..70985 | - | 1236 | WP_043755124.1 | acyl-CoA dehydrogenase family protein | - |
| LOE23_RS23310 (LOE23_23280) | 70982..71476 | - | 495 | WP_043755128.1 | MaoC family dehydratase | - |
| LOE23_RS23315 (LOE23_23285) | 71473..72816 | - | 1344 | WP_224557915.1 | MmgE/PrpD family protein | - |
| LOE23_RS23320 (LOE23_23290) | 72806..74086 | - | 1281 | WP_052418558.1 | TRAP transporter large permease | - |
| LOE23_RS23325 (LOE23_23295) | 74086..74631 | - | 546 | WP_081979733.1 | TRAP transporter small permease | - |
| LOE23_RS23330 (LOE23_23300) | 74697..75695 | - | 999 | WP_052418559.1 | TRAP transporter substrate-binding protein DctP | - |
| LOE23_RS23335 (LOE23_23305) | 75844..76764 | - | 921 | WP_043755133.1 | LysR family transcriptional regulator | - |
| LOE23_RS23340 (LOE23_23310) | 76795..77514 | - | 720 | WP_229939243.1 | LysR substrate-binding domain-containing protein | - |
| LOE23_RS23345 (LOE23_23315) | 77455..77901 | + | 447 | Protein_85 | IS6 family transposase | - |
| LOE23_RS23350 (LOE23_23320) | 77878..80547 | - | 2670 | WP_229939218.1 | strawberry notch family protein | - |
| LOE23_RS23355 (LOE23_23325) | 80773..81882 | - | 1110 | WP_224558030.1 | IS110 family transposase | - |
| LOE23_RS23360 (LOE23_23330) | 81984..82364 | - | 381 | Protein_88 | hypothetical protein | - |
| LOE23_RS23365 (LOE23_23335) | 82541..82834 | + | 294 | WP_067297285.1 | hypothetical protein | - |
| LOE23_RS23370 (LOE23_23340) | 83357..84058 | - | 702 | WP_067297288.1 | RES family NAD+ phosphorylase | - |
| LOE23_RS23375 (LOE23_23345) | 84055..84456 | - | 402 | WP_067297291.1 | MbcA/ParS/Xre antitoxin family protein | - |
| LOE23_RS23380 (LOE23_23350) | 84515..85159 | - | 645 | WP_121066445.1 | antitoxin of toxin-antitoxin stability system | - |
| LOE23_RS23385 (LOE23_23355) | 85152..85571 | - | 420 | WP_067297244.1 | hypothetical protein | - |
| LOE23_RS23390 (LOE23_23360) | 85647..85844 | - | 198 | WP_047998245.1 | hypothetical protein | - |
| LOE23_RS23395 (LOE23_23365) | 85846..86223 | - | 378 | WP_114276348.1 | hypothetical protein | - |
| LOE23_RS23400 (LOE23_23370) | 86234..86725 | - | 492 | WP_067297141.1 | hypothetical protein | - |
| LOE23_RS23405 (LOE23_23375) | 86829..87347 | - | 519 | WP_114276373.1 | DNA repair protein RadC | - |
| LOE23_RS23410 (LOE23_23380) | 87457..87897 | - | 441 | WP_114276349.1 | DNA repair protein RadC | - |
| LOE23_RS23415 (LOE23_23385) | 88025..89224 | - | 1200 | WP_121066443.1 | DUF932 domain-containing protein | - |
| LOE23_RS23420 (LOE23_23390) | 89362..90267 | - | 906 | WP_114276002.1 | hypothetical protein | - |
| LOE23_RS23425 (LOE23_23395) | 90307..90903 | + | 597 | WP_037954955.1 | hypothetical protein | - |
| LOE23_RS23430 (LOE23_23400) | 90958..91362 | - | 405 | WP_009827211.1 | single-stranded DNA-binding protein | - |
| LOE23_RS23435 (LOE23_23405) | 91782..92069 | + | 288 | WP_009827212.1 | H-NS histone family protein | - |
| LOE23_RS23440 (LOE23_23410) | 92079..93524 | - | 1446 | WP_114276004.1 | hypothetical protein | - |
| LOE23_RS23445 (LOE23_23415) | 93763..93927 | - | 165 | WP_007803240.1 | hypothetical protein | - |
| LOE23_RS23450 (LOE23_23420) | 94311..94784 | - | 474 | WP_114276003.1 | hypothetical protein | - |
| LOE23_RS23455 (LOE23_23425) | 94884..97061 | - | 2178 | WP_224556256.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE23_RS23460 (LOE23_23430) | 97352..98395 | - | 1044 | WP_114276417.1 | IS5 family transposase | - |
| LOE23_RS23465 (LOE23_23435) | 98461..99618 | - | 1158 | WP_121066480.1 | helix-turn-helix domain-containing protein | - |
| LOE23_RS23470 (LOE23_23440) | 99858..100817 | - | 960 | WP_121066477.1 | plasmid partitioning protein RepB | - |
| LOE23_RS23475 (LOE23_23445) | 100807..101943 | - | 1137 | WP_229940660.1 | plasmid partitioning protein RepA | - |
| LOE23_RS23480 (LOE23_23450) | 102451..103338 | - | 888 | WP_114273238.1 | recombinase family protein | - |
| LOE23_RS23485 (LOE23_23455) | 103543..106881 | + | 3339 | WP_224556255.1 | DEAD/DEAH box helicase | - |
| LOE23_RS23490 (LOE23_23460) | 106985..108079 | - | 1095 | WP_224556253.1 | tyrosine-type recombinase/integrase | - |
| LOE23_RS23495 (LOE23_23465) | 108238..109122 | + | 885 | WP_229939227.1 | DUF1403 family protein | - |
| LOE23_RS23500 (LOE23_23470) | 109126..109722 | + | 597 | WP_109535033.1 | SMC-Scp complex subunit ScpB | - |
| LOE23_RS23505 (LOE23_23475) | 110746..111613 | - | 868 | Protein_117 | TniB family NTP-binding protein | - |
| LOE23_RS23510 (LOE23_23480) | 111630..113264 | - | 1635 | WP_229939245.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE23_RS23515 (LOE23_23485) | 113565..115322 | - | 1758 | WP_224557756.1 | alpha/beta hydrolase | - |
| LOE23_RS23520 (LOE23_23490) | 115636..117567 | + | 1932 | WP_229941949.1 | VWA domain-containing protein | - |
| LOE23_RS23525 (LOE23_23495) | 117585..118448 | + | 864 | WP_224557754.1 | hypothetical protein | - |
| LOE23_RS23530 (LOE23_23500) | 118461..118982 | + | 522 | WP_224557753.1 | hypothetical protein | - |
| LOE23_RS23535 (LOE23_23505) | 119584..120543 | + | 960 | WP_224557752.1 | hypothetical protein | - |
| LOE23_RS23540 (LOE23_23510) | 120717..122036 | - | 1320 | WP_224557751.1 | MFS transporter | - |
| LOE23_RS23545 (LOE23_23515) | 122045..122305 | - | 261 | WP_007120627.1 | metal-sensing transcriptional repressor | - |
| LOE23_RS23550 (LOE23_23520) | 122807..123535 | + | 729 | WP_224557750.1 | HupE/UreJ family protein | - |
| LOE23_RS23555 (LOE23_23525) | 123553..124176 | + | 624 | WP_037929504.1 | hypothetical protein | - |
| LOE23_RS23560 (LOE23_23530) | 124388..124741 | + | 354 | WP_224557748.1 | hypothetical protein | - |
| LOE23_RS23565 (LOE23_23535) | 124832..126271 | + | 1440 | WP_082899302.1 | multicopper oxidase family protein | - |
| LOE23_RS23570 (LOE23_23540) | 126312..126767 | + | 456 | WP_037929510.1 | DUF411 domain-containing protein | - |
| LOE23_RS23785 | 126834..126968 | + | 135 | WP_263481059.1 | hypothetical protein | - |
| LOE23_RS23575 (LOE23_23545) | 127118..127543 | + | 426 | WP_224557746.1 | cytochrome c | - |
| LOE23_RS23580 (LOE23_23550) | 127540..128136 | + | 597 | WP_037929514.1 | DsbE family thiol:disulfide interchange protein | - |
| LOE23_RS23585 (LOE23_23555) | 128133..128645 | + | 513 | WP_037929516.1 | TlpA disulfide reductase family protein | - |
| LOE23_RS23590 (LOE23_23560) | 128728..129018 | + | 291 | WP_037929519.1 | hypothetical protein | - |
| LOE23_RS23595 (LOE23_23565) | 129018..129722 | + | 705 | WP_037929522.1 | SCO family protein | - |
| LOE23_RS23600 (LOE23_23570) | 129719..130210 | + | 492 | WP_081855445.1 | hypothetical protein | - |
| LOE23_RS23605 (LOE23_23575) | 130207..130947 | + | 741 | WP_037929528.1 | cytochrome c biogenesis protein CcdA | - |
| LOE23_RS23610 (LOE23_23580) | 130944..132053 | - | 1110 | WP_224557743.1 | permease | - |
| LOE23_RS23615 (LOE23_23585) | 132140..132865 | - | 726 | WP_037929534.1 | glutaredoxin domain-containing protein | - |
| LOE23_RS23620 (LOE23_23590) | 132927..133796 | - | 870 | WP_037929537.1 | DUF305 domain-containing protein | - |
| LOE23_RS23625 (LOE23_23595) | 133904..134323 | - | 420 | WP_037929540.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE23_RS23630 (LOE23_23600) | 134343..136850 | - | 2508 | WP_067293079.1 | heavy metal translocating P-type ATPase | - |
| LOE23_RS23635 (LOE23_23605) | 136989..137198 | + | 210 | WP_037929722.1 | heavy-metal-associated domain-containing protein | - |
| LOE23_RS23640 (LOE23_23610) | 137371..137787 | + | 417 | WP_037929545.1 | hypothetical protein | - |
| LOE23_RS23645 (LOE23_23615) | 137861..138082 | + | 222 | WP_223865963.1 | hypothetical protein | - |
| LOE23_RS23650 (LOE23_23620) | 138082..139542 | + | 1461 | WP_067293082.1 | TolC family protein | - |
| LOE23_RS23655 (LOE23_23625) | 139554..140912 | + | 1359 | WP_224557742.1 | copper oxidase | - |
| LOE23_RS23660 (LOE23_23630) | 140959..141675 | + | 717 | WP_037929554.1 | copper-binding protein | - |
| LOE23_RS23665 (LOE23_23635) | 141785..142318 | + | 534 | WP_009820144.1 | plastocyanin/azurin family copper-binding protein | - |
| LOE23_RS23670 (LOE23_23640) | 142327..143631 | + | 1305 | WP_009820143.1 | ABC transporter transmembrane domain-containing protein | - |
| LOE23_RS23675 (LOE23_23645) | 143628..144086 | + | 459 | WP_037929563.1 | cytochrome c | - |
| LOE23_RS23680 (LOE23_23650) | 144183..145424 | + | 1242 | WP_224557739.1 | sialidase family protein | - |
| LOE23_RS23685 (LOE23_23655) | 145468..148623 | - | 3156 | WP_224557738.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| LOE23_RS23690 (LOE23_23660) | 148620..150056 | - | 1437 | WP_067293091.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LOE23_RS23695 (LOE23_23665) | 150053..150451 | - | 399 | WP_067293094.1 | FixH family protein | - |
| LOE23_RS23700 (LOE23_23670) | 150978..153305 | - | 2328 | WP_111550081.1 | heavy metal translocating P-type ATPase | - |
| LOE23_RS23705 (LOE23_23675) | 153522..155873 | + | 2352 | WP_190325599.1 | cation-translocating P-type ATPase | - |
| LOE23_RS23710 (LOE23_23680) | 155935..156435 | + | 501 | WP_067293139.1 | L,D-transpeptidase family protein | - |
| LOE23_RS23715 (LOE23_23685) | 156461..156625 | - | 165 | WP_170134538.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|