MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110569 bp
Accession: NZ_CP086874 Location: 1..110569 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-97 Replicon: plasmid P4
Accession: NZ_CP086874 Location: 1..110569 Organism: Pseudosulfitobacter pseudonitzschiae strain SC1-97 Replicon: plasmid P4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE23_RS21420 (LOE23_21395) | 43..339 | + | 297 | WP_230073220.1 | DUF3768 domain-containing protein | - |
| LOE23_RS21425 (LOE23_21400) | 554..1585 | + | 1032 | WP_224558028.1 | IS110 family transposase ISRhru3 | Transposase |
| LOE23_RS21430 (LOE23_21405) | 2053..4035 | + | 1983 | WP_224557482.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE23_RS21435 (LOE23_21410) | 4108..4800 | + | 693 | WP_224557484.1 | regulator | - |
| LOE23_RS21440 (LOE23_21415) | 4800..5453 | + | 654 | WP_067296481.1 | hypothetical protein | - |
| LOE23_RS21445 (LOE23_21420) | 5577..5903 | + | 327 | WP_224557487.1 | type II toxin-antitoxin system PrlF family antitoxin | - |
| LOE23_RS21450 (LOE23_21425) | 5900..6417 | + | 518 | Protein_6 | type II toxin-antitoxin system YhaV family toxin | - |
| LOE23_RS21455 (LOE23_21430) | 6956..7237 | - | 282 | WP_224557491.1 | hypothetical protein | - |
| LOE23_RS21460 (LOE23_21435) | 7456..8585 | + | 1130 | WP_224557493.1 | IS3 family transposase ISRosp1 | Transposase |
| LOE23_RS21465 (LOE23_21440) | 8612..9004 | + | 393 | WP_229940884.1 | hypothetical protein | - |
| LOE23_RS21470 (LOE23_21445) | 9185..10006 | - | 822 | WP_074838788.1 | alpha/beta hydrolase | - |
| LOE23_RS21475 (LOE23_21450) | 10003..11043 | - | 1041 | WP_074838791.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LOE23_RS21480 (LOE23_21455) | 11040..11975 | - | 936 | WP_074838794.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LOE23_RS21485 (LOE23_21460) | 11980..12768 | - | 789 | WP_074838796.1 | fumarylacetoacetate hydrolase family protein | - |
| LOE23_RS21490 (LOE23_21465) | 12807..13808 | - | 1002 | WP_074838799.1 | amidohydrolase family protein | - |
| LOE23_RS21495 (LOE23_21470) | 13906..14760 | - | 855 | WP_074838803.1 | VOC family protein | - |
| LOE23_RS21500 (LOE23_21475) | 14793..15647 | - | 855 | WP_224557497.1 | VOC family protein | - |
| LOE23_RS21505 (LOE23_21480) | 15655..16461 | - | 807 | WP_074838809.1 | ABC transporter ATP-binding protein | - |
| LOE23_RS21510 (LOE23_21485) | 16454..17254 | - | 801 | WP_074838811.1 | ABC transporter ATP-binding protein | - |
| LOE23_RS21515 (LOE23_21490) | 17251..18309 | - | 1059 | WP_224557499.1 | branched-chain amino acid ABC transporter permease | - |
| LOE23_RS21520 (LOE23_21495) | 18302..19174 | - | 873 | WP_074838816.1 | branched-chain amino acid ABC transporter permease | - |
| LOE23_RS21525 (LOE23_21500) | 19201..20367 | - | 1167 | WP_224557500.1 | ABC transporter substrate-binding protein | - |
| LOE23_RS21530 (LOE23_21505) | 20422..21108 | - | 687 | WP_170850597.1 | TetR/AcrR family transcriptional regulator | - |
| LOE23_RS21535 (LOE23_21510) | 21098..21424 | - | 327 | WP_083416143.1 | non-heme iron oxygenase ferredoxin subunit | - |
| LOE23_RS21540 (LOE23_21515) | 21421..22188 | - | 768 | WP_211568985.1 | 4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 | VF |
| LOE23_RS21545 (LOE23_21520) | 22254..22769 | - | 516 | WP_074838825.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LOE23_RS21550 (LOE23_21525) | 22766..24052 | - | 1287 | WP_074838828.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LOE23_RS21555 (LOE23_21530) | 24081..25283 | - | 1203 | WP_074838830.1 | FAD-dependent oxidoreductase | - |
| LOE23_RS21560 (LOE23_21535) | 25446..25946 | + | 501 | WP_139211499.1 | hypothetical protein | - |
| LOE23_RS21565 (LOE23_21540) | 26266..27432 | - | 1167 | WP_074838835.1 | acyl-CoA dehydrogenase family protein | - |
| LOE23_RS21570 (LOE23_21545) | 27429..29432 | - | 2004 | WP_074838838.1 | biotin carboxylase N-terminal domain-containing protein | - |
| LOE23_RS21575 (LOE23_21550) | 29429..30223 | - | 795 | WP_074838840.1 | crotonase/enoyl-CoA hydratase family protein | - |
| LOE23_RS21580 (LOE23_21555) | 30233..31831 | - | 1599 | WP_074838843.1 | carboxyl transferase domain-containing protein | - |
| LOE23_RS21585 (LOE23_21560) | 31911..32525 | - | 615 | Protein_33 | IS21 family transposase ISPve1 | Transposase |
| LOE23_RS21590 (LOE23_21565) | 32522..33967 | - | 1446 | WP_229939271.1 | IS21 family transposase ISPve1 | Transposase |
| LOE23_RS21595 (LOE23_21570) | 34128..34406 | - | 279 | Protein_35 | transposase | - |
| LOE23_RS21600 (LOE23_21575) | 34695..35462 | + | 768 | WP_224557507.1 | capsular polysaccharide synthesis protein | - |
| LOE23_RS21605 (LOE23_21580) | 35498..36214 | - | 717 | WP_224557509.1 | methyltransferase | - |
| LOE23_RS21610 (LOE23_21585) | 37193..38122 | + | 930 | WP_224557511.1 | DUF2493 domain-containing protein | - |
| LOE23_RS21615 (LOE23_21590) | 38661..38867 | + | 207 | WP_007120662.1 | hypothetical protein | - |
| LOE23_RS21620 (LOE23_21595) | 39420..39977 | + | 558 | WP_224557513.1 | transposase | - |
| LOE23_RS21625 (LOE23_21600) | 39964..42297 | + | 2334 | WP_224557515.1 | T-DNA border endonuclease VirD2 | Relaxase |
| LOE23_RS21630 (LOE23_21605) | 42306..44306 | + | 2001 | WP_224557516.1 | Protein VirD4 | VF |
| LOE23_RS21635 (LOE23_21610) | 44424..45206 | - | 783 | Protein_43 | LysR family transcriptional regulator | - |
| LOE23_RS21640 (LOE23_21615) | 45190..45840 | - | 651 | WP_224557517.1 | copper-binding protein | - |
| LOE23_RS21645 (LOE23_21620) | 45888..47246 | - | 1359 | WP_141102058.1 | copper oxidase | - |
| LOE23_RS21650 (LOE23_21625) | 47258..48721 | - | 1464 | WP_054540802.1 | TolC family protein | - |
| LOE23_RS21655 (LOE23_21630) | 49016..49438 | - | 423 | WP_082386796.1 | hypothetical protein | - |
| LOE23_RS21660 (LOE23_21635) | 49637..49837 | - | 201 | WP_009815466.1 | heavy-metal-associated domain-containing protein | - |
| LOE23_RS21665 (LOE23_21640) | 49978..52485 | + | 2508 | WP_054540801.1 | heavy metal translocating P-type ATPase | - |
| LOE23_RS21670 (LOE23_21645) | 52505..52924 | + | 420 | WP_009503818.1 | Cu(I)-responsive transcriptional regulator | - |
| LOE23_RS21675 (LOE23_21650) | 53048..53920 | + | 873 | WP_009503819.1 | DUF305 domain-containing protein | - |
| LOE23_RS21680 (LOE23_21655) | 53943..54707 | + | 765 | WP_170317858.1 | glutaredoxin | - |
| LOE23_RS21685 (LOE23_21660) | 54808..55548 | - | 741 | WP_028095358.1 | cytochrome c biogenesis protein CcdA | - |
| LOE23_RS21690 (LOE23_21665) | 55545..56036 | - | 492 | WP_009503822.1 | hypothetical protein | - |
| LOE23_RS21695 (LOE23_21670) | 56033..56233 | - | 201 | WP_028095359.1 | hypothetical protein | - |
| LOE23_RS21700 (LOE23_21675) | 56375..57340 | - | 966 | WP_028095360.1 | cation diffusion facilitator family transporter | - |
| LOE23_RS21705 (LOE23_21680) | 57330..58085 | - | 756 | WP_028095361.1 | transglutaminase family protein | - |
| LOE23_RS21710 (LOE23_21685) | 58182..58760 | - | 579 | WP_028095362.1 | cation transporter | - |
| LOE23_RS21715 (LOE23_21690) | 58864..59292 | - | 429 | WP_013959865.1 | IS607 family transposase ISChh1 | Transposase |
| LOE23_RS21720 (LOE23_21695) | 59500..60066 | + | 567 | WP_028095363.1 | SCO family protein | - |
| LOE23_RS21725 (LOE23_21700) | 60072..60494 | + | 423 | WP_028095364.1 | disulfide bond formation protein B | - |
| LOE23_RS21730 (LOE23_21705) | 60491..61150 | + | 660 | WP_028095365.1 | thioredoxin domain-containing protein | - |
| LOE23_RS21735 (LOE23_21710) | 61174..61641 | + | 468 | WP_028095366.1 | copper chaperone PCu(A)C | - |
| LOE23_RS21740 (LOE23_21715) | 61641..62267 | + | 627 | WP_028095367.1 | SCO family protein | - |
| LOE23_RS21745 (LOE23_21720) | 62264..63637 | + | 1374 | WP_028095368.1 | M23 family metallopeptidase | - |
| LOE23_RS21750 (LOE23_21725) | 63641..64096 | + | 456 | WP_028095369.1 | DUF411 domain-containing protein | - |
| LOE23_RS21755 (LOE23_21730) | 64109..64891 | + | 783 | WP_028095370.1 | ZIP family metal transporter | - |
| LOE23_RS21760 (LOE23_21735) | 64920..65378 | + | 459 | WP_224557524.1 | Lipoprotein signal peptidase | VF |
| LOE23_RS21765 (LOE23_21740) | 65345..66958 | + | 1614 | WP_028095371.1 | apolipoprotein N-acyltransferase | - |
| LOE23_RS21770 (LOE23_21745) | 66949..67116 | + | 168 | WP_009503847.1 | hypothetical protein | - |
| LOE23_RS21775 (LOE23_21750) | 67177..69078 | + | 1902 | WP_223870726.1 | penicillin acylase family protein | - |
| LOE23_RS21780 (LOE23_21755) | 69075..70076 | + | 1002 | WP_028095373.1 | cytochrome c oxidase assembly protein | - |
| LOE23_RS21785 (LOE23_21760) | 70296..70808 | - | 513 | WP_035367119.1 | L,D-transpeptidase family protein | - |
| LOE23_RS21790 (LOE23_21765) | 70991..71257 | - | 267 | WP_035367121.1 | zf-TFIIB domain-containing protein | - |
| LOE23_RS21795 (LOE23_21770) | 71292..73646 | - | 2355 | WP_224557525.1 | cation-translocating P-type ATPase | - |
| LOE23_RS21800 (LOE23_21775) | 73829..74113 | + | 285 | WP_028095377.1 | hypothetical protein | - |
| LOE23_RS21805 (LOE23_21780) | 74161..74823 | - | 663 | WP_009503854.1 | L,D-transpeptidase | - |
| LOE23_RS21810 (LOE23_21785) | 75115..75567 | - | 453 | WP_224557528.1 | cytochrome c | - |
| LOE23_RS21815 (LOE23_21790) | 75629..76123 | - | 495 | WP_028095379.1 | DUF411 domain-containing protein | - |
| LOE23_RS21820 (LOE23_21795) | 76123..77052 | - | 930 | WP_223870725.1 | exo-alpha-sialidase | - |
| LOE23_RS21825 (LOE23_21800) | 77070..78515 | - | 1446 | WP_054540800.1 | multicopper oxidase family protein | - |
| LOE23_RS21830 (LOE23_21805) | 78677..79126 | + | 450 | WP_176441066.1 | hypothetical protein | - |
| LOE23_RS21835 (LOE23_21810) | 79121..79573 | - | 453 | WP_054540798.1 | Transcriptional regulator MntR | VF |
| LOE23_RS21840 (LOE23_21815) | 79900..80898 | + | 999 | WP_229939274.1 | multicopper oxidase domain-containing protein | - |
| LOE23_RS21845 (LOE23_21820) | 80895..82076 | + | 1182 | WP_224557529.1 | metal transporter | - |
| LOE23_RS21850 (LOE23_21825) | 82404..83402 | - | 999 | WP_224557532.1 | hypothetical protein | - |
| LOE23_RS21855 (LOE23_21830) | 83563..85197 | + | 1635 | WP_229939265.1 | Mu transposase C-terminal domain-containing protein | - |
| LOE23_RS21860 (LOE23_21835) | 85214..86080 | + | 867 | WP_224558017.1 | TniB family NTP-binding protein | - |
| LOE23_RS21865 (LOE23_21840) | 87104..87715 | - | 612 | WP_197919471.1 | SMC-Scp complex subunit ScpB | - |
| LOE23_RS21870 (LOE23_21845) | 87763..88647 | - | 885 | WP_037239259.1 | DUF1403 family protein | - |
| LOE23_RS21875 (LOE23_21850) | 88774..89913 | + | 1140 | WP_229940649.1 | tyrosine-type recombinase/integrase | - |
| LOE23_RS21880 (LOE23_21855) | 90015..90506 | + | 492 | Protein_92 | recombinase family protein | - |
| LOE23_RS21885 (LOE23_21860) | 90585..90980 | - | 396 | WP_028288627.1 | PIN domain-containing protein | Toxin Detail |
| LOE23_RS21890 (LOE23_21865) | 90970..91197 | - | 228 | WP_009503866.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LOE23_RS21895 (LOE23_21870) | 91406..92599 | + | 1194 | WP_009503867.1 | Sporulation initiation inhibitor protein Soj | VF |
| LOE23_RS21900 (LOE23_21875) | 92583..93515 | + | 933 | WP_028288626.1 | plasmid partitioning protein RepB | - |
| LOE23_RS21905 (LOE23_21880) | 93729..94940 | + | 1212 | WP_050525470.1 | plasmid replication protein RepC | - |
| LOE23_RS21910 (LOE23_21885) | 95109..96870 | + | 1762 | Protein_98 | ParB N-terminal domain-containing protein | - |
| LOE23_RS21915 (LOE23_21890) | 97027..98394 | - | 1368 | WP_028288624.1 | histidine kinase dimerization/phospho-acceptor domain-containing protein | - |
| LOE23_RS21920 (LOE23_21895) | 98391..99050 | - | 660 | WP_009503873.1 | Transcriptional regulatory protein QseB | VF |
| LOE23_RS21925 (LOE23_21900) | 99196..99513 | + | 318 | WP_028288623.1 | PepSY domain-containing protein | - |
| LOE23_RS21930 (LOE23_21905) | 99470..100855 | + | 1386 | WP_028288622.1 | ferredoxin reductase family protein | - |
| LOE23_RS21935 (LOE23_21910) | 101036..101416 | + | 381 | WP_028288621.1 | PepSY domain-containing protein | - |
| LOE23_RS21940 (LOE23_21915) | 101452..101922 | + | 471 | WP_028288620.1 | DUF2271 domain-containing protein | - |
| LOE23_RS21945 (LOE23_21920) | 101934..104141 | + | 2208 | WP_028288619.1 | PepSY domain-containing protein | - |
| LOE23_RS21950 (LOE23_21925) | 104122..105102 | + | 981 | WP_028288618.1 | FAD:protein FMN transferase | - |
| LOE23_RS21955 (LOE23_21930) | 105108..107015 | + | 1908 | WP_036540305.1 | heavy metal translocating P-type ATPase | - |
| LOE23_RS21960 (LOE23_21935) | 107012..107713 | + | 702 | WP_028288616.1 | VIT family protein | - |
| LOE23_RS21965 (LOE23_21940) | 107849..108010 | + | 162 | WP_224557872.1 | hypothetical protein | - |
| LOE23_RS21970 (LOE23_21945) | 108039..108332 | - | 294 | WP_028288615.1 | hypothetical protein | - |
| LOE23_RS21975 (LOE23_21950) | 108685..109155 | + | 471 | WP_224557871.1 | hypothetical protein | - |
| LOE23_RS21980 (LOE23_21955) | 109196..110134 | + | 939 | WP_224557870.1 | zincin-like metallopeptidase domain-containing protein | - |
| LOE23_RS21985 (LOE23_21960) | 110158..110430 | + | 273 | WP_224557869.1 | DUF6330 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|