MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 82231 bp
Accession: NZ_CP086867 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain SC33-17 Replicon: plasmid P5
Accession: NZ_CP086867 Location: 1..82231 Organism: Pseudosulfitobacter pseudonitzschiae strain SC33-17 Replicon: plasmid P5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOE29_RS22935 (LOE29_22915) | 90..1610 | + | 1521 | WP_224557571.1 | Xylose import ATP-binding protein XylG | VF |
| LOE29_RS22940 (LOE29_22920) | 1623..2819 | + | 1197 | WP_224557570.1 | sugar ABC transporter permease | - |
| LOE29_RS22945 (LOE29_22925) | 2832..4574 | + | 1743 | WP_224557569.1 | L-arabinonate dehydratase | - |
| LOE29_RS22950 (LOE29_22930) | 4574..5500 | + | 927 | WP_224557568.1 | Gfo/Idh/MocA family oxidoreductase | - |
| LOE29_RS22955 (LOE29_22935) | 5537..6454 | + | 918 | WP_224557566.1 | dihydrodipicolinate synthase family protein | - |
| LOE29_RS22960 (LOE29_22940) | 6543..7103 | + | 561 | WP_224557565.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| LOE29_RS22965 (LOE29_22945) | 7100..8155 | + | 1056 | WP_224557564.1 | dTDP-glucose 4,6-dehydratase 2 | VF |
| LOE29_RS22970 (LOE29_22950) | 8152..9030 | + | 879 | WP_224557563.1 | Glucose-1-phosphate thymidylyltransferase 1 | VF |
| LOE29_RS22975 (LOE29_22955) | 9321..10016 | + | 696 | WP_224557562.1 | PRC-barrel domain-containing protein | - |
| LOE29_RS22980 (LOE29_22960) | 10215..11393 | - | 1179 | WP_224557561.1 | LarC family nickel insertion protein | - |
| LOE29_RS22985 (LOE29_22965) | 11393..12709 | - | 1317 | WP_224557560.1 | lactate racemase domain-containing protein | - |
| LOE29_RS22990 (LOE29_22970) | 12726..14273 | - | 1548 | WP_224557559.1 | altronate dehydratase family protein | - |
| LOE29_RS22995 (LOE29_22975) | 14365..15135 | + | 771 | WP_224557557.1 | GntR family transcriptional regulator | - |
| LOE29_RS23000 (LOE29_22980) | 15604..15879 | - | 276 | WP_224557555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LOE29_RS23005 (LOE29_22985) | 15872..16165 | - | 294 | WP_224557554.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LOE29_RS23010 (LOE29_22990) | 16236..17141 | - | 906 | WP_224557552.1 | dihydrodipicolinate synthase family protein | - |
| LOE29_RS23015 (LOE29_22995) | 17152..18891 | - | 1740 | WP_224557550.1 | L-arabinonate dehydratase | - |
| LOE29_RS23020 (LOE29_23000) | 19153..20688 | + | 1536 | WP_224557548.1 | aldehyde dehydrogenase (NADP(+)) | - |
| LOE29_RS23025 (LOE29_23005) | 20694..21668 | + | 975 | WP_224557547.1 | 2-hydroxyacid dehydrogenase | - |
| LOE29_RS23030 (LOE29_23010) | 21732..22946 | - | 1215 | WP_224557545.1 | MFS transporter | - |
| LOE29_RS23035 (LOE29_23015) | 23048..23686 | - | 639 | WP_224557543.1 | TetR/AcrR family transcriptional regulator | - |
| LOE29_RS23040 (LOE29_23020) | 23746..24174 | + | 429 | WP_224557541.1 | DUF4345 domain-containing protein | - |
| LOE29_RS23045 (LOE29_23025) | 24405..25334 | - | 930 | WP_224557539.1 | alpha/beta hydrolase | - |
| LOE29_RS23050 (LOE29_23030) | 25321..25626 | - | 306 | WP_037930066.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LOE29_RS23055 (LOE29_23035) | 25755..25988 | + | 234 | WP_224557538.1 | hypothetical protein | - |
| LOE29_RS23060 (LOE29_23040) | 26327..27145 | + | 819 | Protein_26 | GTP-binding protein | - |
| LOE29_RS23065 (LOE29_23045) | 27224..27811 | - | 588 | WP_101754700.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| LOE29_RS23070 | 27977..28948 | + | 972 | WP_229992021.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE29_RS23075 | 29517..30868 | + | 1352 | Protein_29 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LOE29_RS23080 (LOE29_23055) | 30977..32086 | + | 1110 | WP_229939302.1 | ABC transporter substrate-binding protein | - |
| LOE29_RS23085 (LOE29_23060) | 32083..33012 | + | 930 | WP_224557611.1 | ABC transporter permease | - |
| LOE29_RS23090 (LOE29_23065) | 33056..33820 | + | 765 | WP_229939311.1 | ABC transporter permease subunit | - |
| LOE29_RS23095 (LOE29_23070) | 33817..35265 | + | 1449 | WP_224557609.1 | putative ABC transporter ATP-binding protein YejF | VF |
| LOE29_RS23100 (LOE29_23075) | 35296..35613 | - | 318 | WP_224557608.1 | NIPSNAP family protein | - |
| LOE29_RS23105 (LOE29_23080) | 35623..36339 | - | 717 | WP_037930086.1 | FadR/GntR family transcriptional regulator | - |
| LOE29_RS23110 (LOE29_23085) | 36355..37050 | - | 696 | WP_224557607.1 | nickel pincer cofactor biosynthesis protein LarB | - |
| LOE29_RS23115 (LOE29_23090) | 37043..37828 | - | 786 | WP_224557605.1 | adenine nucleotide alpha hydrolase | - |
| LOE29_RS23120 (LOE29_23095) | 37825..38577 | - | 753 | WP_224557604.1 | FCD domain-containing protein | - |
| LOE29_RS23125 (LOE29_23100) | 38844..39806 | + | 963 | WP_224557603.1 | TAXI family TRAP transporter solute-binding subunit | - |
| LOE29_RS23130 (LOE29_23105) | 39892..41766 | + | 1875 | WP_051694623.1 | TRAP transporter permease | - |
| LOE29_RS23135 (LOE29_23110) | 41788..43473 | + | 1686 | WP_224557602.1 | thiamine pyrophosphate-binding protein | - |
| LOE29_RS23140 (LOE29_23115) | 43499..44941 | + | 1443 | WP_224557601.1 | FAD-binding oxidoreductase | - |
| LOE29_RS23145 (LOE29_23120) | 44965..45594 | + | 630 | WP_224557600.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LOE29_RS23150 (LOE29_23125) | 46010..47683 | - | 1674 | WP_224557599.1 | CHAT domain-containing protein | - |
| LOE29_RS23155 (LOE29_23130) | 47692..48399 | - | 708 | WP_143186815.1 | hypothetical protein | - |
| LOE29_RS23160 (LOE29_23135) | 48538..51264 | - | 2727 | WP_224557598.1 | hypothetical protein | - |
| LOE29_RS23165 (LOE29_23140) | 51234..52280 | - | 1047 | WP_081855458.1 | serine protease | - |
| LOE29_RS23170 (LOE29_23145) | 52286..54259 | - | 1974 | WP_229940665.1 | caspase family protein | - |
| LOE29_RS23175 (LOE29_23150) | 54420..54983 | - | 564 | WP_224557596.1 | type 1 glutamine amidotransferase domain-containing protein | - |
| LOE29_RS23180 (LOE29_23155) | 55271..55858 | + | 588 | WP_037930134.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LOE29_RS23185 (LOE29_23160) | 56016..57470 | - | 1455 | WP_224557595.1 | patatin-like phospholipase family protein | - |
| LOE29_RS23190 (LOE29_23165) | 57512..58837 | - | 1326 | WP_224557594.1 | Sensor protein RstB | VF |
| LOE29_RS23195 (LOE29_23170) | 58834..59529 | - | 696 | WP_224557593.1 | Transcriptional regulatory protein CusR | VF |
| LOE29_RS23200 (LOE29_23175) | 59522..60772 | - | 1251 | WP_229940663.1 | trypsin-like peptidase domain-containing protein | - |
| LOE29_RS23205 (LOE29_23180) | 60963..61583 | + | 621 | WP_224557591.1 | hypothetical protein | - |
| LOE29_RS23210 (LOE29_23185) | 61583..63667 | + | 2085 | WP_229940894.1 | caspase family protein | - |
| LOE29_RS23215 (LOE29_23190) | 63766..64746 | - | 981 | WP_224557589.1 | ParB/RepB/Spo0J family partition protein | - |
| LOE29_RS23220 (LOE29_23195) | 64743..65945 | - | 1203 | WP_224557588.1 | Cell division protein PomZ | VF |
| LOE29_RS23225 (LOE29_23200) | 66571..67581 | + | 1011 | WP_037930116.1 | RepB family plasmid replication initiator protein | - |
| LOE29_RS23230 (LOE29_23205) | 67718..69154 | - | 1437 | WP_224557587.1 | hypothetical protein | - |
| LOE29_RS23235 (LOE29_23210) | 69151..70740 | - | 1590 | WP_224557585.1 | CHAT domain-containing protein | - |
| LOE29_RS23240 (LOE29_23215) | 71315..72070 | - | 756 | WP_224557583.1 | IclR family transcriptional regulator C-terminal domain-containing protein | - |
| LOE29_RS23245 (LOE29_23220) | 72183..72890 | + | 708 | WP_224557581.1 | 3-oxoacid CoA-transferase subunit A | - |
| LOE29_RS23250 (LOE29_23225) | 72887..73573 | + | 687 | WP_229939282.1 | 3-oxoacid CoA-transferase subunit B | - |
| LOE29_RS23255 (LOE29_23230) | 73782..75617 | - | 1836 | WP_224557579.1 | Serine/threonine-protein kinase toxin HipA | VF |
| LOE29_RS23260 (LOE29_23235) | 75786..77309 | - | 1524 | WP_224557578.1 | aldehyde dehydrogenase family protein | - |
| LOE29_RS23265 (LOE29_23240) | 77439..78395 | - | 957 | WP_224557576.1 | helix-turn-helix domain-containing protein | - |
| LOE29_RS23270 (LOE29_23245) | 78804..79670 | - | 867 | WP_224557575.1 | ECF RNA polymerase sigma factor SigJ | VF |
| LOE29_RS23275 (LOE29_23250) | 79682..79984 | - | 303 | WP_224557574.1 | antibiotic biosynthesis monooxygenase | - |
| LOE29_RS23280 (LOE29_23255) | 80074..81006 | - | 933 | WP_224557573.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|